{"action":"created","issue":{"url":"https://api.github.com/repos/geneontology/amigo/issues/43","repository_url":"https://api.github.com/repos/geneontology/amigo","labels_url":"https://api.github.com/repos/geneontology/amigo/issues/43/labels{/name}","comments_url":"https://api.github.com/repos/geneontology/amigo/issues/43/comments","events_url":"https://api.github.com/repos/geneontology/amigo/issues/43/events","html_url":"https://github.com/geneontology/amigo/issues/43","id":19919364,"number":43,"title":"Add ability to filter redundant annotations","user":{"login":"cmungall","id":50745,"avatar_url":"https://avatars.githubusercontent.com/u/50745?v=3","gravatar_id":"","url":"https://api.github.com/users/cmungall","html_url":"https://github.com/cmungall","followers_url":"https://api.github.com/users/cmungall/followers","following_url":"https://api.github.com/users/cmungall/following{/other_user}","gists_url":"https://api.github.com/users/cmungall/gists{/gist_id}","starred_url":"https://api.github.com/users/cmungall/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cmungall/subscriptions","organizations_url":"https://api.github.com/users/cmungall/orgs","repos_url":"https://api.github.com/users/cmungall/repos","events_url":"https://api.github.com/users/cmungall/events{/privacy}","received_events_url":"https://api.github.com/users/cmungall/received_events","type":"User","site_admin":false},"labels":[{"id":27023962,"url":"https://api.github.com/repos/geneontology/amigo/labels/enhancement","name":"enhancement","color":"84b6eb","default":true}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":{"url":"https://api.github.com/repos/geneontology/amigo/milestones/12","html_url":"https://github.com/geneontology/amigo/milestones/2.5","labels_url":"https://api.github.com/repos/geneontology/amigo/milestones/12/labels","id":1616854,"number":12,"title":"2.5","description":"Work on finishing beta features and new features.","creator":{"login":"kltm","id":2687900,"avatar_url":"https://avatars.githubusercontent.com/u/2687900?v=3","gravatar_id":"","url":"https://api.github.com/users/kltm","html_url":"https://github.com/kltm","followers_url":"https://api.github.com/users/kltm/followers","following_url":"https://api.github.com/users/kltm/following{/other_user}","gists_url":"https://api.github.com/users/kltm/gists{/gist_id}","starred_url":"https://api.github.com/users/kltm/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kltm/subscriptions","organizations_url":"https://api.github.com/users/kltm/orgs","repos_url":"https://api.github.com/users/kltm/repos","events_url":"https://api.github.com/users/kltm/events{/privacy}","received_events_url":"https://api.github.com/users/kltm/received_events","type":"User","site_admin":false},"open_issues":53,"closed_issues":8,"state":"open","created_at":"2016-03-02T02:31:12Z","updated_at":"2016-10-22T01:12:24Z","due_on":null,"closed_at":null},"comments":7,"created_at":"2013-09-23T16:18:52Z","updated_at":"2016-11-03T20:41:05Z","closed_at":null,"body":" - [x] Add a flag to the golr schema for annotation documents to state when an annotation is redundant\r\n - [ ] Populate this in the golr loading code\r\n - [ ] Add a 'include redundant' toggle facet view; default is off (i.e. we remove redundant by default)\r\n\r\nTBD:\r\ndo we want a globally redundant flag? Or make this relative to evidence code?\r\n\r\nSee also:\r\nSee also: http://jira.geneontology.org/browse/GO-144\r\n\r\nPriority: post-Bar Harbor\r\n"},"comment":{"url":"https://api.github.com/repos/geneontology/amigo/issues/comments/258267478","html_url":"https://github.com/geneontology/amigo/issues/43#issuecomment-258267478","issue_url":"https://api.github.com/repos/geneontology/amigo/issues/43","id":258267478,"user":{"login":"cmungall","id":50745,"avatar_url":"https://avatars.githubusercontent.com/u/50745?v=3","gravatar_id":"","url":"https://api.github.com/users/cmungall","html_url":"https://github.com/cmungall","followers_url":"https://api.github.com/users/cmungall/followers","following_url":"https://api.github.com/users/cmungall/following{/other_user}","gists_url":"https://api.github.com/users/cmungall/gists{/gist_id}","starred_url":"https://api.github.com/users/cmungall/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cmungall/subscriptions","organizations_url":"https://api.github.com/users/cmungall/orgs","repos_url":"https://api.github.com/users/cmungall/repos","events_url":"https://api.github.com/users/cmungall/events{/privacy}","received_events_url":"https://api.github.com/users/cmungall/received_events","type":"User","site_admin":false},"created_at":"2016-11-03T20:41:05Z","updated_at":"2016-11-03T20:41:05Z","body":"copying comments from @ValWood:\r\n\r\n+1\r\nAt PomBase we do this with IEAs NAS and TAS,. We only use these to *supplement* manual annotation and discard anything which is less specific than any manual annotation. Nobody misses them and we remove 87% of our IEAs in this way (all but ~4000 currently). \r\n\r\nThis has lots of other advantages as well making the annotation easier for our users to consume, the bad IEA annotations are now easy to spot.\r\nhttps://github.com/geneontology/go-annotation/issues\r\n\r\nhttp://www.slideshare.net/ValerieWood/pombase-internal-rules-for-curation-using-ontologies\r\nslides 23 -28\r\n\r\n\r\n"}}
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