{"action":"opened","issue":{"url":"https://api.github.com/repos/pjeraldo/imtornado2/issues/5","repository_url":"https://api.github.com/repos/pjeraldo/imtornado2","labels_url":"https://api.github.com/repos/pjeraldo/imtornado2/issues/5/labels{/name}","comments_url":"https://api.github.com/repos/pjeraldo/imtornado2/issues/5/comments","events_url":"https://api.github.com/repos/pjeraldo/imtornado2/issues/5/events","html_url":"https://github.com/pjeraldo/imtornado2/issues/5","id":183271869,"number":5,"title":"Map file and sequence names","user":{"login":"gtsiamis","id":2630188,"avatar_url":"https://avatars.githubusercontent.com/u/2630188?v=3","gravatar_id":"","url":"https://api.github.com/users/gtsiamis","html_url":"https://github.com/gtsiamis","followers_url":"https://api.github.com/users/gtsiamis/followers","following_url":"https://api.github.com/users/gtsiamis/following{/other_user}","gists_url":"https://api.github.com/users/gtsiamis/gists{/gist_id}","starred_url":"https://api.github.com/users/gtsiamis/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/gtsiamis/subscriptions","organizations_url":"https://api.github.com/users/gtsiamis/orgs","repos_url":"https://api.github.com/users/gtsiamis/repos","events_url":"https://api.github.com/users/gtsiamis/events{/privacy}","received_events_url":"https://api.github.com/users/gtsiamis/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2016-10-16T15:08:39Z","updated_at":"2016-10-16T15:08:39Z","closed_at":null,"body":"I am using imtornado on a mac and so far I have been able to use successfully the program  with the example data.\r\nWhen I try to use my data and after making the mapping file the script is giving me an error \r\n\r\n/Users/gtsiamis/Applications/IM-TORNADO-2.0.3.2/bin/tornado_run_pipeline.sh: Number of samples found with unambiguous ids do not mach number of fastq files found. Check the naming of your samples.\r\n\r\nAlthough, I have tried and renamed the sample file in several ways I always get the same error. Could you please give me an example on how the map file has to be for files with names\r\n\r\n0296.FC000_L001_R1_001.fastq\r\n0296.FC000_L001_R2_001.fastq\r\n\r\nThanks in advance\r\nGeorge\r\n"}}
{"actor":{"display_login":"gtsiamis"}}