{"action":"created","issue":{"url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/926","repository_url":"https://api.github.com/repos/cBioPortal/cbioportal","labels_url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/926/labels{/name}","comments_url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/926/comments","events_url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/926/events","html_url":"https://github.com/cBioPortal/cbioportal/pull/926","id":140818977,"number":926,"title":"Timeline use .*OS_STATUS$ and .*OS_MONTHS$ for timepoint of death","user":{"login":"inodb","id":1334004,"avatar_url":"https://avatars.githubusercontent.com/u/1334004?v=3","gravatar_id":"","url":"https://api.github.com/users/inodb","html_url":"https://github.com/inodb","followers_url":"https://api.github.com/users/inodb/followers","following_url":"https://api.github.com/users/inodb/following{/other_user}","gists_url":"https://api.github.com/users/inodb/gists{/gist_id}","starred_url":"https://api.github.com/users/inodb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/inodb/subscriptions","organizations_url":"https://api.github.com/users/inodb/orgs","repos_url":"https://api.github.com/users/inodb/repos","events_url":"https://api.github.com/users/inodb/events{/privacy}","received_events_url":"https://api.github.com/users/inodb/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/cBioPortal/cbioportal/labels/bug","name":"bug","color":"fc2929"},{"url":"https://api.github.com/repos/cBioPortal/cbioportal/labels/ready%20to%20review","name":"ready to review","color":"00bb00"}],"state":"open","locked":false,"assignee":{"login":"aderidder","id":9414840,"avatar_url":"https://avatars.githubusercontent.com/u/9414840?v=3","gravatar_id":"","url":"https://api.github.com/users/aderidder","html_url":"https://github.com/aderidder","followers_url":"https://api.github.com/users/aderidder/followers","following_url":"https://api.github.com/users/aderidder/following{/other_user}","gists_url":"https://api.github.com/users/aderidder/gists{/gist_id}","starred_url":"https://api.github.com/users/aderidder/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/aderidder/subscriptions","organizations_url":"https://api.github.com/users/aderidder/orgs","repos_url":"https://api.github.com/users/aderidder/repos","events_url":"https://api.github.com/users/aderidder/events{/privacy}","received_events_url":"https://api.github.com/users/aderidder/received_events","type":"User","site_admin":false},"milestone":null,"comments":5,"created_at":"2016-03-14T22:50:43Z","updated_at":"2016-03-15T16:08:22Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/cBioPortal/cbioportal/pulls/926","html_url":"https://github.com/cBioPortal/cbioportal/pull/926","diff_url":"https://github.com/cBioPortal/cbioportal/pull/926.diff","patch_url":"https://github.com/cBioPortal/cbioportal/pull/926.patch"},"body":"Before only CAISIS_OS_STATUS/CAISIS_OS_MONTHS was used for timepoint of death,\r\nwhich are MSKCC internal names. This changes the determination of the timepoint\r\nby allowing any type of prefix before OS_STATUS and OS_MONTHS (including no\r\nprefix as is the case in the public portal)."},"comment":{"url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/comments/196900021","html_url":"https://github.com/cBioPortal/cbioportal/pull/926#issuecomment-196900021","issue_url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/926","id":196900021,"user":{"login":"inodb","id":1334004,"avatar_url":"https://avatars.githubusercontent.com/u/1334004?v=3","gravatar_id":"","url":"https://api.github.com/users/inodb","html_url":"https://github.com/inodb","followers_url":"https://api.github.com/users/inodb/followers","following_url":"https://api.github.com/users/inodb/following{/other_user}","gists_url":"https://api.github.com/users/inodb/gists{/gist_id}","starred_url":"https://api.github.com/users/inodb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/inodb/subscriptions","organizations_url":"https://api.github.com/users/inodb/orgs","repos_url":"https://api.github.com/users/inodb/repos","events_url":"https://api.github.com/users/inodb/events{/privacy}","received_events_url":"https://api.github.com/users/inodb/received_events","type":"User","site_admin":false},"created_at":"2016-03-15T16:08:22Z","updated_at":"2016-03-15T16:08:22Z","body":"Sounds like a plan. There are some more challenges to this:\r\n\r\n- Make study view handle `SOURCE_SYSTEM`. Currently it's easy to spot where a clinical attribute comes from due to the prefix.\r\n- Similar for tooltips on patient view\r\n- Think a bit about how `SOURCE_SYSTEM` differs between clinical data and genetic data. Maybe there is some generalization possible? We will be setting a `SOURCE_SYSTEM` attribute for clinical data, but not for genetic data. We currently assume all the genetic data is from the same source (the study), but this is probably not the case in the future. Seems to me like these problems are very similar."}}