{"action":"created","issue":{"url":"https://api.github.com/repos/marbl/canu/issues/199","repository_url":"https://api.github.com/repos/marbl/canu","labels_url":"https://api.github.com/repos/marbl/canu/issues/199/labels{/name}","comments_url":"https://api.github.com/repos/marbl/canu/issues/199/comments","events_url":"https://api.github.com/repos/marbl/canu/issues/199/events","html_url":"https://github.com/marbl/canu/issues/199","id":166055624,"number":199,"title":"miss one file","user":{"login":"yanz711","id":5688525,"avatar_url":"https://avatars.githubusercontent.com/u/5688525?v=3","gravatar_id":"","url":"https://api.github.com/users/yanz711","html_url":"https://github.com/yanz711","followers_url":"https://api.github.com/users/yanz711/followers","following_url":"https://api.github.com/users/yanz711/following{/other_user}","gists_url":"https://api.github.com/users/yanz711/gists{/gist_id}","starred_url":"https://api.github.com/users/yanz711/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/yanz711/subscriptions","organizations_url":"https://api.github.com/users/yanz711/orgs","repos_url":"https://api.github.com/users/yanz711/repos","events_url":"https://api.github.com/users/yanz711/events{/privacy}","received_events_url":"https://api.github.com/users/yanz711/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":14,"created_at":"2016-07-18T09:39:12Z","updated_at":"2016-07-19T13:46:38Z","closed_at":null,"body":"red.000005.out is missing.\r\n\r\n /scratch/beegfs/monthly/zyan/annotation/Pacbio/sinbAll/unitigging/3-overlapErrorAdjustment/red.sh 5 > /scratch/beegfs/monthly/zyan/annotation/Pacbio/sinbAll/unitigging/3-overlapErrorAdjustment/red.000005.out 2>&1\r\n\r\n-- Finished on Mon Jul 18 09:18:48 2016 (35 seconds) with 48965.7 GB free disk space\r\n----------------------------------------\r\n--\r\n-- 1 read error detection jobs failed:\r\n--   job /scratch/beegfs/monthly/zyan/annotation/Pacbio/sinbAll/unitigging/3-overlapErrorAdjustment/0005.red FAILED.\r\n"},"comment":{"url":"https://api.github.com/repos/marbl/canu/issues/comments/233637623","html_url":"https://github.com/marbl/canu/issues/199#issuecomment-233637623","issue_url":"https://api.github.com/repos/marbl/canu/issues/199","id":233637623,"user":{"login":"brianwalenz","id":8249720,"avatar_url":"https://avatars.githubusercontent.com/u/8249720?v=3","gravatar_id":"","url":"https://api.github.com/users/brianwalenz","html_url":"https://github.com/brianwalenz","followers_url":"https://api.github.com/users/brianwalenz/followers","following_url":"https://api.github.com/users/brianwalenz/following{/other_user}","gists_url":"https://api.github.com/users/brianwalenz/gists{/gist_id}","starred_url":"https://api.github.com/users/brianwalenz/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/brianwalenz/subscriptions","organizations_url":"https://api.github.com/users/brianwalenz/orgs","repos_url":"https://api.github.com/users/brianwalenz/repos","events_url":"https://api.github.com/users/brianwalenz/events{/privacy}","received_events_url":"https://api.github.com/users/brianwalenz/received_events","type":"User","site_admin":false},"created_at":"2016-07-19T13:46:38Z","updated_at":"2016-07-19T13:46:38Z","body":"You can upload to ftp://ftp.cbcb.umd.edu/incoming/sergek/.  You can't 'ls' that directory, only upload, and only we can see the data.\r\n\r\ngzip -1 is suggested as it is fast and gets nearly all the compression possible."}}
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