{"action":"created","issue":{"url":"https://api.github.com/repos/nalinimsingh/HST.953/issues/2","repository_url":"https://api.github.com/repos/nalinimsingh/HST.953","labels_url":"https://api.github.com/repos/nalinimsingh/HST.953/issues/2/labels{/name}","comments_url":"https://api.github.com/repos/nalinimsingh/HST.953/issues/2/comments","events_url":"https://api.github.com/repos/nalinimsingh/HST.953/issues/2/events","html_url":"https://github.com/nalinimsingh/HST.953/issues/2","id":192605303,"number":2,"title":"Data Analysis","user":{"login":"nalinimsingh","id":8250364,"avatar_url":"https://avatars.githubusercontent.com/u/8250364?v=3","gravatar_id":"","url":"https://api.github.com/users/nalinimsingh","html_url":"https://github.com/nalinimsingh","followers_url":"https://api.github.com/users/nalinimsingh/followers","following_url":"https://api.github.com/users/nalinimsingh/following{/other_user}","gists_url":"https://api.github.com/users/nalinimsingh/gists{/gist_id}","starred_url":"https://api.github.com/users/nalinimsingh/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nalinimsingh/subscriptions","organizations_url":"https://api.github.com/users/nalinimsingh/orgs","repos_url":"https://api.github.com/users/nalinimsingh/repos","events_url":"https://api.github.com/users/nalinimsingh/events{/privacy}","received_events_url":"https://api.github.com/users/nalinimsingh/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":4,"created_at":"2016-11-30T16:03:30Z","updated_at":"2016-12-01T05:53:14Z","closed_at":null,"body":"**Data manipulations before running analyses:**\r\n\r\nChen:\r\n- [ ] Change creatinine values used to detect ESRD to be the latest value within a window of 4 hours before ICU admission\r\n\r\nNalini:\r\n- [ ] Linear interpolation of MAP values for hours without data\r\n- [ ] Compute AKI based on \"I\" and \"F\" criteria\r\n\r\n**Tables/figures to create for our paper:**\r\n\r\n- [ ] Table of covariates for AKI vs non-AKI cohorts\r\n- [ ] Table of logistic regression results \r\n- [ ] Bar chart of fraction of patients developing AKI within 72 hours for each minimum MAP bin\r\n- [ ] (Secondary) Scatter plot of time to AKI development based on minimum MAP value\r\n- [ ] (Secondary) Line plot of fraction developing AKI based on duration of hypotension\r\n\r\n@cx1111 Are you interested in helping with creating the plots, etc.? If so, let me know how you'd like to split up the figures. No worries if not.\r\n\r\nLet me know if I've missed anything or misinterpreted anything."},"comment":{"url":"https://api.github.com/repos/nalinimsingh/HST.953/issues/comments/264085352","html_url":"https://github.com/nalinimsingh/HST.953/issues/2#issuecomment-264085352","issue_url":"https://api.github.com/repos/nalinimsingh/HST.953/issues/2","id":264085352,"user":{"login":"juliannc","id":22162523,"avatar_url":"https://avatars.githubusercontent.com/u/22162523?v=3","gravatar_id":"","url":"https://api.github.com/users/juliannc","html_url":"https://github.com/juliannc","followers_url":"https://api.github.com/users/juliannc/followers","following_url":"https://api.github.com/users/juliannc/following{/other_user}","gists_url":"https://api.github.com/users/juliannc/gists{/gist_id}","starred_url":"https://api.github.com/users/juliannc/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/juliannc/subscriptions","organizations_url":"https://api.github.com/users/juliannc/orgs","repos_url":"https://api.github.com/users/juliannc/repos","events_url":"https://api.github.com/users/juliannc/events{/privacy}","received_events_url":"https://api.github.com/users/juliannc/received_events","type":"User","site_admin":false},"created_at":"2016-12-01T05:53:14Z","updated_at":"2016-12-01T05:53:14Z","body":"?Chen,\n\n     I suspect that the 2000 individuals with no creatinine prior to admission came from an OSH and the creatine was done there. We have no way of obtaining OSH data retrospectively.\n\nthe 40 individuals with no record creatine  are a surprise .\n\njuliann\n\n________________________________\nFrom: Chen Xie <notifications@github.com>\nSent: Wednesday, November 30, 2016 8:38 PM\nTo: nalinimsingh/HST.953\nCc: Corey,Juliann (BIDMC - Nursing); Mention\nSubject: Re: [nalinimsingh/HST.953] Data Analysis (#2)\n\n\nSome annoyances.\n\nI actually just made 'admission creatinine' the closest creatinine value before intime, and if there is none before intime, the first one after. Out of these 7600 unique icustayids for which there is a creatinine, only 5700 values are taken before intime (not even applying the 0 to -4h window).\n\nIn addition, there are about 40 icustay_ids that were not excluded in our cohort, who have no creatinine measurements. These 40 were not filtered out in the final cohort.\n\nI updated the tables in the google drive based on my above description.\n\n-\nYou are receiving this because you were mentioned.\nReply to this email directly, view it on GitHub<https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_nalinimsingh_HST.953_issues_2-23issuecomment-2D264053025&d=CwMFaQ&c=WknmpdNpvrlj2B5K1aWVqL1SOiF30547pqSuOmtwXTQ&r=zdSU84yBy3j2OzZr9NEwh9M8teYlU_8vtGr4h9UKx-Q&m=V8FW-m8fVE3BEB0od2IRr9IARFPBRwH9K8NlpLTVwpY&s=uJFXROIFYQ7X3SDwFGeZk659ANadd6azqdzPs8X_FQ4&e=>, or mute the thread<https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_notifications_unsubscribe-2Dauth_AVIsW-2DDGCsKX60e-2DtbZ-5FNlzJpjwEB43jks5rDiT7gaJpZM4LAXOo&d=CwMFaQ&c=WknmpdNpvrlj2B5K1aWVqL1SOiF30547pqSuOmtwXTQ&r=zdSU84yBy3j2OzZr9NEwh9M8teYlU_8vtGr4h9UKx-Q&m=V8FW-m8fVE3BEB0od2IRr9IARFPBRwH9K8NlpLTVwpY&s=p4ZWrc41s068xGeAbGW3oDjzosRaI27lximCR0JL3q4&e=>.\n\n________________________________\n\nThis message is intended for the use of the person(s) to whom it may be addressed. 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