{"action":"closed","issue":{"url":"https://api.github.com/repos/PacificBiosciences/FALCON-integrate/issues/79","repository_url":"https://api.github.com/repos/PacificBiosciences/FALCON-integrate","labels_url":"https://api.github.com/repos/PacificBiosciences/FALCON-integrate/issues/79/labels{/name}","comments_url":"https://api.github.com/repos/PacificBiosciences/FALCON-integrate/issues/79/comments","events_url":"https://api.github.com/repos/PacificBiosciences/FALCON-integrate/issues/79/events","html_url":"https://github.com/PacificBiosciences/FALCON-integrate/issues/79","id":170657832,"number":79,"title":"Telling Falcon pipeline to stop after specific steps","user":{"login":"JohnUrban","id":7783314,"avatar_url":"https://avatars.githubusercontent.com/u/7783314?v=3","gravatar_id":"","url":"https://api.github.com/users/JohnUrban","html_url":"https://github.com/JohnUrban","followers_url":"https://api.github.com/users/JohnUrban/followers","following_url":"https://api.github.com/users/JohnUrban/following{/other_user}","gists_url":"https://api.github.com/users/JohnUrban/gists{/gist_id}","starred_url":"https://api.github.com/users/JohnUrban/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/JohnUrban/subscriptions","organizations_url":"https://api.github.com/users/JohnUrban/orgs","repos_url":"https://api.github.com/users/JohnUrban/repos","events_url":"https://api.github.com/users/JohnUrban/events{/privacy}","received_events_url":"https://api.github.com/users/JohnUrban/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":5,"created_at":"2016-08-11T14:21:53Z","updated_at":"2016-08-11T15:10:17Z","closed_at":"2016-08-11T15:10:16Z","body":"Hi,\r\n\r\nIs there a way to set up the cfg file (or another way) to tell Falcon to stop after specific steps?\r\n\r\nFor examples\r\n- stop before merging las files in the job_xxxx subdirectories of 0-rawreads\r\n- stop after doing all the work in 0-rawreads\r\n- etc etc etc\r\n\r\nbest,\r\n\r\n  John\r\n"}}
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