{"action":"created","issue":{"url":"https://api.github.com/repos/peterjc/pico_galaxy/issues/18","repository_url":"https://api.github.com/repos/peterjc/pico_galaxy","labels_url":"https://api.github.com/repos/peterjc/pico_galaxy/issues/18/labels{/name}","comments_url":"https://api.github.com/repos/peterjc/pico_galaxy/issues/18/comments","events_url":"https://api.github.com/repos/peterjc/pico_galaxy/issues/18/events","html_url":"https://github.com/peterjc/pico_galaxy/pull/18","id":185874875,"number":18,"title":"Update rxlr_motifs.xml","user":{"login":"lecorguille","id":11072022,"avatar_url":"https://avatars.githubusercontent.com/u/11072022?v=3","gravatar_id":"","url":"https://api.github.com/users/lecorguille","html_url":"https://github.com/lecorguille","followers_url":"https://api.github.com/users/lecorguille/followers","following_url":"https://api.github.com/users/lecorguille/following{/other_user}","gists_url":"https://api.github.com/users/lecorguille/gists{/gist_id}","starred_url":"https://api.github.com/users/lecorguille/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/lecorguille/subscriptions","organizations_url":"https://api.github.com/users/lecorguille/orgs","repos_url":"https://api.github.com/users/lecorguille/repos","events_url":"https://api.github.com/users/lecorguille/events{/privacy}","received_events_url":"https://api.github.com/users/lecorguille/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":3,"created_at":"2016-10-28T09:12:06Z","updated_at":"2016-11-02T22:12:47Z","closed_at":"2016-10-28T15:12:51Z","pull_request":{"url":"https://api.github.com/repos/peterjc/pico_galaxy/pulls/18","html_url":"https://github.com/peterjc/pico_galaxy/pull/18","diff_url":"https://github.com/peterjc/pico_galaxy/pull/18.diff","patch_url":"https://github.com/peterjc/pico_galaxy/pull/18.patch"},"body":"At least hmmer is available through conda :)\n\n```\nconda search hmmer\nFetching package metadata ...........\nhmmer                        2.3.2                         0  bioconda/linux-64\n                             3.1b2                         0  bioconda/linux-64\n                             3.1b2                         1  bioconda/linux-64\n```\n\nPSort, under GPL licence, should have a conda package. (wolfpsort seem down)\nFor sure, we will have to wait a little for signalp, promoter and tmhmm because of their licence :/\n"},"comment":{"url":"https://api.github.com/repos/peterjc/pico_galaxy/issues/comments/258015541","html_url":"https://github.com/peterjc/pico_galaxy/pull/18#issuecomment-258015541","issue_url":"https://api.github.com/repos/peterjc/pico_galaxy/issues/18","id":258015541,"user":{"login":"peterjc","id":63959,"avatar_url":"https://avatars.githubusercontent.com/u/63959?v=3","gravatar_id":"","url":"https://api.github.com/users/peterjc","html_url":"https://github.com/peterjc","followers_url":"https://api.github.com/users/peterjc/followers","following_url":"https://api.github.com/users/peterjc/following{/other_user}","gists_url":"https://api.github.com/users/peterjc/gists{/gist_id}","starred_url":"https://api.github.com/users/peterjc/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/peterjc/subscriptions","organizations_url":"https://api.github.com/users/peterjc/orgs","repos_url":"https://api.github.com/users/peterjc/repos","events_url":"https://api.github.com/users/peterjc/events{/privacy}","received_events_url":"https://api.github.com/users/peterjc/received_events","type":"User","site_admin":false},"created_at":"2016-11-02T22:12:47Z","updated_at":"2016-11-02T22:12:47Z","body":"I am wondering what are the binary file names installed? Do both the Conda pacakges use ``hmmsearch`` regardless of if this is from HMMER 2 or HMMER 3?\r\n\r\nProbably I should ask the HMMER Conda package maintainers about this..."}}
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