{"action":"opened","issue":{"url":"https://api.github.com/repos/HenrikBengtsson/illuminaio/issues/5","labels_url":"https://api.github.com/repos/HenrikBengtsson/illuminaio/issues/5/labels{/name}","comments_url":"https://api.github.com/repos/HenrikBengtsson/illuminaio/issues/5/comments","events_url":"https://api.github.com/repos/HenrikBengtsson/illuminaio/issues/5/events","html_url":"https://github.com/HenrikBengtsson/illuminaio/issues/5","id":125915045,"number":5,"title":"readBPM - SNPIndex and SNPNames missing","user":{"login":"grafab","id":5277911,"avatar_url":"https://avatars.githubusercontent.com/u/5277911?v=3","gravatar_id":"","url":"https://api.github.com/users/grafab","html_url":"https://github.com/grafab","followers_url":"https://api.github.com/users/grafab/followers","following_url":"https://api.github.com/users/grafab/following{/other_user}","gists_url":"https://api.github.com/users/grafab/gists{/gist_id}","starred_url":"https://api.github.com/users/grafab/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/grafab/subscriptions","organizations_url":"https://api.github.com/users/grafab/orgs","repos_url":"https://api.github.com/users/grafab/repos","events_url":"https://api.github.com/users/grafab/events{/privacy}","received_events_url":"https://api.github.com/users/grafab/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":0,"created_at":"2016-01-11T10:31:24Z","updated_at":"2016-01-11T10:31:24Z","closed_at":null,"body":"The indices in the IDAT file need to be \"translated\" to the marker names, in order to make sense out of the data.\r\nreadBPM does not output SNPIndex and SNPNames. The lines in the code are commented out. Uncommenting them results in \"Error: cannot allocate vector of size 7.0 Gb\". Is there any way to get the marker names from the BPM file without using GenomeStudio? "}}