{"action":"created","issue":{"url":"https://api.github.com/repos/OBOFoundry/OBOFoundry.github.io/issues/298","repository_url":"https://api.github.com/repos/OBOFoundry/OBOFoundry.github.io","labels_url":"https://api.github.com/repos/OBOFoundry/OBOFoundry.github.io/issues/298/labels{/name}","comments_url":"https://api.github.com/repos/OBOFoundry/OBOFoundry.github.io/issues/298/comments","events_url":"https://api.github.com/repos/OBOFoundry/OBOFoundry.github.io/issues/298/events","html_url":"https://github.com/OBOFoundry/OBOFoundry.github.io/issues/298","id":170869403,"number":298,"title":"Minting of new URIs in Wikidata","user":{"login":"mcourtot","id":2214135,"avatar_url":"https://avatars.githubusercontent.com/u/2214135?v=3","gravatar_id":"","url":"https://api.github.com/users/mcourtot","html_url":"https://github.com/mcourtot","followers_url":"https://api.github.com/users/mcourtot/followers","following_url":"https://api.github.com/users/mcourtot/following{/other_user}","gists_url":"https://api.github.com/users/mcourtot/gists{/gist_id}","starred_url":"https://api.github.com/users/mcourtot/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mcourtot/subscriptions","organizations_url":"https://api.github.com/users/mcourtot/orgs","repos_url":"https://api.github.com/users/mcourtot/repos","events_url":"https://api.github.com/users/mcourtot/events{/privacy}","received_events_url":"https://api.github.com/users/mcourtot/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":5,"created_at":"2016-08-12T13:19:32Z","updated_at":"2016-08-15T23:04:08Z","closed_at":null,"body":"Wikidata mints new URIs for entities.\r\nConsider \r\nhttps://www.wikidata.org/wiki/Q14331103, NMDA glutamate receptor clustering\r\nvs\r\nhttp://purl.obolibrary.org/obo/GO_0097114, NMDA glutamate receptor clustering"},"comment":{"url":"https://api.github.com/repos/OBOFoundry/OBOFoundry.github.io/issues/comments/239955165","html_url":"https://github.com/OBOFoundry/OBOFoundry.github.io/issues/298#issuecomment-239955165","issue_url":"https://api.github.com/repos/OBOFoundry/OBOFoundry.github.io/issues/298","id":239955165,"user":{"login":"goodb","id":2086122,"avatar_url":"https://avatars.githubusercontent.com/u/2086122?v=3","gravatar_id":"","url":"https://api.github.com/users/goodb","html_url":"https://github.com/goodb","followers_url":"https://api.github.com/users/goodb/followers","following_url":"https://api.github.com/users/goodb/following{/other_user}","gists_url":"https://api.github.com/users/goodb/gists{/gist_id}","starred_url":"https://api.github.com/users/goodb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/goodb/subscriptions","organizations_url":"https://api.github.com/users/goodb/orgs","repos_url":"https://api.github.com/users/goodb/repos","events_url":"https://api.github.com/users/goodb/events{/privacy}","received_events_url":"https://api.github.com/users/goodb/received_events","type":"User","site_admin":false},"created_at":"2016-08-15T23:04:07Z","updated_at":"2016-08-15T23:04:07Z","body":"Basically nothing like that happens automatically on Wikidata.  Everything\nis maintained by bots like ours.  We are working hard to establish patterns\nthat keep the resources we are maintaining (e.g. the GO and the DO parts of\nwikidata as well as most of the genes and proteins in there..) in sync with\nthe original sources as they change.  I think that for wikidata we pretty\nmuch need to accept and work with it as a potpourri, but, if you have a\nreally strong argument for making a fundamental change I'm sure the\ncommunity would be happy to discuss it.  The only thing preventing or\nfostering any change is the will of the community.  The best place to get\nstarted is probably the mailing list:\nhttps://lists.wikimedia.org/mailman/listinfo/wikidata\n\nOn Mon, Aug 15, 2016 at 3:24 PM, Damion Dooley <notifications@github.com>\nwrote:\n\n> Totally understood that WikiData will be canvassing concepts from other\n> domains besides biology (one of our own project will be looking at how to\n> use WikiData for culinary food aspects!); and that it will have to mint its\n> own URIs for concepts that aren't already formulated elsewhere. I'm just\n> exploring the tighter 1-1 concept mappings where the core concept is in\n> fact being imported from elsewhere - word for word. The idea of adding\n> annotations to one's heart's content - the crowdsourcing model - I\n> encourage; However, I don't see a technical issue with being able to\n> annotate a term via an https://www.wikidata.org/wiki/GO_1234 type url in\n> this case?\n>\n> Just thinking about ways to reduce computational complexity of querying\n> against a potpourri of Wikidata ids, chemical, cellular, genomic, etc.\n> ontology ids and data out there, which the use of orthogonal ids was\n> supposed to solve ... I suppose in lieu of that, to query WikiData against\n> the potpourri we'd first have a WikiData transform that converted concept\n> ids with known \"imported from\" identifiers (at most one per concept I\n> presume?). Same for http://eol.org/ etc...\n>\n> Reminds me of a question: does Wikidata automatically update its concept\n> definition (and even hierarchy) based on changes in original source of a\n> concept (like the GO ontology)? Or are subsequent source database changes\n> all manually curated back into WikiData?\n>\n> —\n> You are receiving this because you commented.\n> Reply to this email directly, view it on GitHub\n> <https://github.com/OBOFoundry/OBOFoundry.github.io/issues/298#issuecomment-239947949>,\n> or mute the thread\n> <https://github.com/notifications/unsubscribe-auth/AB_U6tRb4kOUHb8i0QhMkiawDCY7Ydxrks5qgOcxgaJpZM4JjE01>\n> .\n>\n"}}
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