{"action":"created","issue":{"url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/17","repository_url":"https://api.github.com/repos/CGATOxford/UMI-tools","labels_url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/17/labels{/name}","comments_url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/17/comments","events_url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/17/events","html_url":"https://github.com/CGATOxford/UMI-tools/pull/17","id":142439321,"number":17,"title":"Ts refactor tools","user":{"login":"TomSmithCGAT","id":6096414,"avatar_url":"https://avatars.githubusercontent.com/u/6096414?v=3","gravatar_id":"","url":"https://api.github.com/users/TomSmithCGAT","html_url":"https://github.com/TomSmithCGAT","followers_url":"https://api.github.com/users/TomSmithCGAT/followers","following_url":"https://api.github.com/users/TomSmithCGAT/following{/other_user}","gists_url":"https://api.github.com/users/TomSmithCGAT/gists{/gist_id}","starred_url":"https://api.github.com/users/TomSmithCGAT/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/TomSmithCGAT/subscriptions","organizations_url":"https://api.github.com/users/TomSmithCGAT/orgs","repos_url":"https://api.github.com/users/TomSmithCGAT/repos","events_url":"https://api.github.com/users/TomSmithCGAT/events{/privacy}","received_events_url":"https://api.github.com/users/TomSmithCGAT/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":1,"created_at":"2016-03-21T19:00:07Z","updated_at":"2016-03-22T09:54:52Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/CGATOxford/UMI-tools/pulls/17","html_url":"https://github.com/CGATOxford/UMI-tools/pull/17","diff_url":"https://github.com/CGATOxford/UMI-tools/pull/17.diff","patch_url":"https://github.com/CGATOxford/UMI-tools/pull/17.patch"},"body":"Hi Ian,\r\n\r\nI've made a number of significant changes, hence the branch.\r\n\r\n- The directory structure has been changed so the two scripts are in the tools directory. \r\n- A setup.py and umi_tools.py have been added to allow installation of UMI-tools package and execution on the command line (e.g umi_tools extract ...). The setup.py is a simplified version of CGAT scripts setup.py, umi_tools.py simplified cgat.py\r\n- Documentation updated to reflect new installation and execution\r\n\r\nPlease feel free to fetch my branch and make changes to the names of the tools etc as you wish. \r\n\r\nApologies for all the documentation commits, I forgot that it's possible to update an rst directly on github and preview the rendered README."},"comment":{"url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/comments/199727100","html_url":"https://github.com/CGATOxford/UMI-tools/pull/17#issuecomment-199727100","issue_url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/17","id":199727100,"user":{"login":"IanSudbery","id":5391758,"avatar_url":"https://avatars.githubusercontent.com/u/5391758?v=3","gravatar_id":"","url":"https://api.github.com/users/IanSudbery","html_url":"https://github.com/IanSudbery","followers_url":"https://api.github.com/users/IanSudbery/followers","following_url":"https://api.github.com/users/IanSudbery/following{/other_user}","gists_url":"https://api.github.com/users/IanSudbery/gists{/gist_id}","starred_url":"https://api.github.com/users/IanSudbery/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/IanSudbery/subscriptions","organizations_url":"https://api.github.com/users/IanSudbery/orgs","repos_url":"https://api.github.com/users/IanSudbery/repos","events_url":"https://api.github.com/users/IanSudbery/events{/privacy}","received_events_url":"https://api.github.com/users/IanSudbery/received_events","type":"User","site_admin":false},"created_at":"2016-03-22T09:54:52Z","updated_at":"2016-03-22T09:54:52Z","body":"Hi Tom, thanks for this, I'll have a play with it. Did you think about dependency installation? "}}