{"action":"created","issue":{"url":"https://api.github.com/repos/FCP-INDI/C-PAC/issues/584","repository_url":"https://api.github.com/repos/FCP-INDI/C-PAC","labels_url":"https://api.github.com/repos/FCP-INDI/C-PAC/issues/584/labels{/name}","comments_url":"https://api.github.com/repos/FCP-INDI/C-PAC/issues/584/comments","events_url":"https://api.github.com/repos/FCP-INDI/C-PAC/issues/584/events","html_url":"https://github.com/FCP-INDI/C-PAC/issues/584","id":189252392,"number":584,"title":"CPAC 1.0.0 pipeline editor saves config yml with incorrect variable 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Release","description":"","creator":{"login":"sgiavasis","id":4644673,"avatar_url":"https://avatars.githubusercontent.com/u/4644673?v=3","gravatar_id":"","url":"https://api.github.com/users/sgiavasis","html_url":"https://github.com/sgiavasis","followers_url":"https://api.github.com/users/sgiavasis/followers","following_url":"https://api.github.com/users/sgiavasis/following{/other_user}","gists_url":"https://api.github.com/users/sgiavasis/gists{/gist_id}","starred_url":"https://api.github.com/users/sgiavasis/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/sgiavasis/subscriptions","organizations_url":"https://api.github.com/users/sgiavasis/orgs","repos_url":"https://api.github.com/users/sgiavasis/repos","events_url":"https://api.github.com/users/sgiavasis/events{/privacy}","received_events_url":"https://api.github.com/users/sgiavasis/received_events","type":"User","site_admin":false},"open_issues":10,"closed_issues":2,"state":"open","created_at":"2016-11-15T17:11:45Z","updated_at":"2016-11-15T19:59:46Z","due_on":null,"closed_at":null},"comments":3,"created_at":"2016-11-14T23:07:25Z","updated_at":"2016-11-15T20:02:10Z","closed_at":null,"body":"After creating and saving a pipeline in the GUI, I am unable to load the pipeline again. I receive this error:\r\n\r\n> ERROR: Configuration file could not be loaded properly - the file might be access-protected or you \r\n\r\n> might have chosen the wrong file.\r\n> \r\n> Error name: main_window_0001\r\n>  \r\n> Exception: 'Configuration' object has no attribute 'resolution_for_func'\r\n> \r\n\r\n In my config file, I found that  ${resolution_for_func} is not defined, but this is:\r\nresolution_for_func_preproc :  3mm\r\n\r\nconfig file:\r\n\r\n> The resolution (in mm) to which the preprocessed, registered functional timeseries outputs are written into. Note that selecting a 1 mm or 2 mm resolution might substantially increase your RAM needs- these resolutions should be selected with caution. For most cases, 3 mm or 4 mm resolutions are suggested.\r\n> resolution_for_func_preproc :  3mm\r\n>  \r\n>  The resolution (in mm) to which the registered derivative outputs are written into.\r\n> resolution_for_func_derivative :  3mm\r\n> \r\n> \r\n>  Standard FSL Skull Stripped Template. Used as a reference image for functional registration\r\n> template_brain_only_for_func :  /usr/share/fsl/5.0/data/standard/MNI152_T1_${resolution_for_func}_brain.nii.gz\r\n> \r\n> \r\n>  Standard FSL Anatomical Brain Image with Skull\r\n> template_skull_for_func :  /usr/share/fsl/5.0/data/standard/MNI152_T1_${resolution_for_func}.nii.gz"},"comment":{"url":"https://api.github.com/repos/FCP-INDI/C-PAC/issues/comments/260750814","html_url":"https://github.com/FCP-INDI/C-PAC/issues/584#issuecomment-260750814","issue_url":"https://api.github.com/repos/FCP-INDI/C-PAC/issues/584","id":260750814,"user":{"login":"nimzodisaster","id":19696085,"avatar_url":"https://avatars.githubusercontent.com/u/19696085?v=3","gravatar_id":"","url":"https://api.github.com/users/nimzodisaster","html_url":"https://github.com/nimzodisaster","followers_url":"https://api.github.com/users/nimzodisaster/followers","following_url":"https://api.github.com/users/nimzodisaster/following{/other_user}","gists_url":"https://api.github.com/users/nimzodisaster/gists{/gist_id}","starred_url":"https://api.github.com/users/nimzodisaster/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nimzodisaster/subscriptions","organizations_url":"https://api.github.com/users/nimzodisaster/orgs","repos_url":"https://api.github.com/users/nimzodisaster/repos","events_url":"https://api.github.com/users/nimzodisaster/events{/privacy}","received_events_url":"https://api.github.com/users/nimzodisaster/received_events","type":"User","site_admin":false},"created_at":"2016-11-15T20:02:10Z","updated_at":"2016-11-15T20:02:10Z","body":"Hmm. I think I know what happened then. I had loaded up a config file produced from a previous C-PAC version into the 1.0.0 GUI, was greeted with a message of some undefined parameters, and then I updated it in the GUI,  saved it, and then I encountered the error posted above. Clearly, I should have mentioned that I started with an old config file from the start.. Let me try making a config from scratch and see if I encounter the error."}}
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