{"action":"closed","issue":{"url":"https://api.github.com/repos/karel-brinda/ococo/issues/10","repository_url":"https://api.github.com/repos/karel-brinda/ococo","labels_url":"https://api.github.com/repos/karel-brinda/ococo/issues/10/labels{/name}","comments_url":"https://api.github.com/repos/karel-brinda/ococo/issues/10/comments","events_url":"https://api.github.com/repos/karel-brinda/ococo/issues/10/events","html_url":"https://github.com/karel-brinda/ococo/issues/10","id":158125868,"number":10,"title":"Error message when several outputs are redirected to standard output","user":{"login":"karel-brinda","id":8779046,"avatar_url":"https://avatars.githubusercontent.com/u/8779046?v=3","gravatar_id":"","url":"https://api.github.com/users/karel-brinda","html_url":"https://github.com/karel-brinda","followers_url":"https://api.github.com/users/karel-brinda/followers","following_url":"https://api.github.com/users/karel-brinda/following{/other_user}","gists_url":"https://api.github.com/users/karel-brinda/gists{/gist_id}","starred_url":"https://api.github.com/users/karel-brinda/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/karel-brinda/subscriptions","organizations_url":"https://api.github.com/users/karel-brinda/orgs","repos_url":"https://api.github.com/users/karel-brinda/repos","events_url":"https://api.github.com/users/karel-brinda/events{/privacy}","received_events_url":"https://api.github.com/users/karel-brinda/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/karel-brinda/ococo/labels/bug","name":"bug","color":"fc2929"}],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2016-06-02T12:12:01Z","updated_at":"2016-08-28T11:31:58Z","closed_at":"2016-08-28T11:31:58Z","body":"```bash\r\nkarel@optikarel:~/ococo$ ./ococo -i test.bam -f test.fa -m real-time -P - -V - > /dev/null\r\n[ococo]: Ococo starting: ococo16 (16 bits per position, 3bits per nucleotide counter)\r\n[ococo]: Initialing SAM/BAM reader.\r\n[ococo]: Loading reference ('test.fa').\r\n[ococo]: Opening VCF stream ('-').\r\n[ococo]: Opening pileup stream ('-').\r\n[ococo]: Starting the main loop.\r\n[ococo]: Ococo successfully finished. Bye.\r\n[ococo:error]: Pileup file could not be closed.\r\n```"}}
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