{"action":"opened","number":31,"pull_request":{"url":"https://api.github.com/repos/biocore/mds-approximations/pulls/31","id":88369804,"html_url":"https://github.com/biocore/mds-approximations/pull/31","diff_url":"https://github.com/biocore/mds-approximations/pull/31.diff","patch_url":"https://github.com/biocore/mds-approximations/pull/31.patch","issue_url":"https://api.github.com/repos/biocore/mds-approximations/issues/31","number":31,"state":"open","locked":false,"title":"Implement ssvd and basic 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reference:\r\n\r\nref\r\n```\r\nEigvals\t9\r\n0.527576831536\t0.380955902485\t0.302541529797\t0.266409397663\t0.255696353121\t0.222923562728\t0.202538724053\t0.191550929645\t0.0\r\n\r\nProportion explained\t9\r\n0.2244823211\t0.162095566209\t0.12873049152\t0.113356380295\t0.108798012753\t0.0948532911187\t0.0861796048848\t0.081504332119\t0.0\r\n\r\nSpecies\t0\t0\r\n\r\nSite\t9\t9\r\n10086.PC.481\t-0.0705337512946\t-0.0523255833501\t0.430931391656\t-0.116746630305\t0.140169551454\t-0.0121985776207\t-0.144852652533\t0.0708443496647\t-0.0\r\n10086.PC.593\t-0.15252345786\t-0.367119659406\t-0.0488310385909\t0.286852415403\t-0.122137624507\t0.0234169453317\t-0.141457741587\t-0.0529995496517\t-0.0\r\n10086.PC.356\t-0.310268662031\t0.202957439323\t-0.161995239726\t-0.0244935105553\t0.15035822631\t-0.249882413934\t-0.0749673365754\t-0.147145848302\t-0.0\r\n10086.PC.355\t-0.181535837645\t0.280265981912\t-0.0544393413007\t0.0939578745749\t0.0589143460999\t0.352680352153\t0.0046686377854\t0.0329116944137\t-0.0\r\n10086.PC.354\t-0.306665965365\t-0.0701963718488\t0.0407228466959\t-0.1114824179\t-0.201732274725\t-0.0620072371812\t0.284898055936\t0.114474970493\t-0.0\r\n10086.PC.636\t0.305648978048\t0.0979331334515\t-0.0703076036076\t0.203718428091\t0.0923240786186\t-0.145946437069\t0.0358828025594\t0.269537748495\t-0.0\r\n10086.PC.635\t0.226649045655\t0.135140021056\t-0.0831332541419\t-0.198963114956\t-0.313113479926\t-0.000656969485293\t-0.195494992339\t0.00207851498269\t-0.0\r\n10086.PC.607\t0.168428915044\t-0.293927672225\t-0.214003498911\t-0.237780522122\t0.217479735297\t0.101065266217\t0.0505607098618\t-0.0158839896734\t-0.0\r\n10086.PC.634\t0.320800735448\t0.0672727110869\t0.161055737927\t0.10493747777\t-0.022262558621\t-0.00647092841082\t0.180762516892\t-0.273817890423\t-0.0\r\n\r\nBiplot\t0\t0\r\n\r\nSite constraints\t0\t0\r\n```\r\n\r\nssvd:\r\n```\r\nEigvals\t8\r\n0.278337313173\t0.145127399638\t0.0915313772517\t0.0709739671632\t0.0653806249996\t0.0496949148193\t0.041021934741\t0.036691758648\r\n\r\nProportion explained\t8\r\n0.35741122654\t0.186357198457\t0.117534876792\t0.0911372333338\t0.0839548571718\t0.0638129335081\t0.0526760133008\t0.0471156608964\r\n\r\nSpecies\t0\t0\r\n\r\nSite\t9\t8\r\n10086.PC.481\t0.054339557937\t0.0342552935393\t-0.251406726004\t-0.0639139098524\t-0.0751782499644\t-0.00610890600446\t0.0691443579795\t0.0328869509958\r\n10086.PC.593\t0.117504841625\t0.240337343453\t0.0284881811287\t0.157039731006\t0.0655070432201\t0.0117269342698\t0.0675238219818\t-0.0246031419646\r\n10086.PC.356\t0.23903254296\t-0.132867446761\t0.0945085311408\t-0.0134091752499\t-0.0806428229559\t-0.125138210893\t0.0357851117413\t-0.0683071878735\r\n10086.PC.355\t0.139856125419\t-0.183478001865\t0.0317600825265\t0.0514380167531\t-0.0315979996486\t0.176618224511\t-0.00222854022115\t0.0152780749135\r\n10086.PC.354\t0.236257007269\t0.0459545249021\t-0.0237578365365\t-0.0610319731643\t0.108196674798\t-0.0310525042603\t-0.135994010622\t0.0531409034407\r\n10086.PC.636\t-0.235473515107\t-0.064112581625\t0.0410176765454\t0.111527340997\t-0.049516907118\t-0.0730882807377\t-0.0171283942826\t0.125123242266\r\n10086.PC.635\t-0.174611568528\t-0.0884703197515\t0.0485002013096\t-0.10892400543\t0.167934642131\t-0.00032900268853\t0.0933181097968\t0.00096487610802\r\n10086.PC.607\t-0.129758486105\t0.192421718914\t0.124850312733\t-0.130174916534\t-0.116642635528\t0.0506123116014\t-0.0241347863587\t-0.00737357308632\r\n10086.PC.634\t-0.24714650547\t-0.0440405308059\t-0.0939604228432\t0.0574488914739\t0.0119402550661\t-0.00324056579811\t-0.0862856700146\t-0.127110144799\r\n\r\nBiplot\t0\t0\r\n\r\nSite constraints\t0\t0\r\n\r\n```","created_at":"2016-10-07T01:45:23Z","updated_at":"2016-10-07T01:45:23Z","closed_at":null,"merged_at":null,"merge_commit_sha":null,"assignee":{"login":"antgonza","id":2014559,"avatar_url":"https://avatars.githubusercontent.com/u/2014559?v=3","gravatar_id":"","url":"https://api.github.com/users/antgonza","html_url":"https://github.com/antgonza","followers_url":"https://api.github.com/users/antgonza/followers","following_url":"https://api.github.com/users/antgonza/following{/other_user}","gists_url":"https://api.github.com/users/antgonza/gists{/gist_id}","starred_url":"https://api.github.com/users/antgonza/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/antgonza/subscriptions","organizations_url":"https://api.github.com/users/antgonza/orgs","repos_url":"https://api.github.com/users/antgonza/repos","events_url":"https://api.github.com/users/antgonza/events{/privacy}","received_events_url":"https://api.github.com/users/antgonza/received_events","type":"User","site_admin":false},"assignees":[{"login":"antgonza","id":2014559,"avatar_url":"https://avatars.githubusercontent.com/u/2014559?v=3","gravatar_id":"","url":"https://api.github.com/users/antgonza","html_url":"https://github.com/antgonza","followers_url":"https://api.github.com/users/antgonza/followers","following_url":"https://api.github.com/users/antgonza/following{/other_user}","gists_url":"https://api.github.com/users/antgonza/gists{/gist_id}","starred_url":"https://api.github.com/users/antgonza/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/antgonza/subscriptions","organizations_url":"https://api.github.com/users/antgonza/orgs","repos_url":"https://api.github.com/users/antgonza/repos","events_url":"https://api.github.com/users/antgonza/events{/privacy}","received_events_url":"https://api.github.com/users/antgonza/received_events","type":"User","site_admin":false}],"milestone":null,"commits_url":"https://api.github.com/repos/biocore/mds-approximations/pulls/31/commits","review_comments_url":"https://api.github.com/repos/biocore/mds-approximations/pulls/31/comments","review_comment_url":"https://api.github.com/repos/biocore/mds-approximations/pulls/comments{/number}","comments_url":"https://api.github.com/repos/biocore/mds-approximations/issues/31/comments","statuses_url":"https://api.github.com/repos/biocore/mds-approximations/statuses/2c7e1d4bd04026762a51ac094d39659034cb73b2","head":{"label":"HannesHolste:ssvd-pcoa","ref":"ssvd-pcoa","sha":"2c7e1d4bd04026762a51ac094d39659034cb73b2","user":{"login":"HannesHolste","id":4384130,"avatar_url":"https://avatars.githubusercontent.com/u/4384130?v=3","gravatar_id":"","url":"https://api.github.com/users/HannesHolste","html_url":"https://github.com/HannesHolste","followers_url":"https://api.github.com/users/HannesHolste/followers","following_url":"https://api.github.com/users/HannesHolste/following{/other_user}","gists_url":"https://api.github.com/users/HannesHolste/gists{/gist_id}","starred_url":"https://api.github.com/users/HannesHolste/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/HannesHolste/subscriptions","organizations_url":"https://api.github.com/users/HannesHolste/orgs","repos_url":"https://api.github.com/users/HannesHolste/repos","events_url":"https://api.github.com/users/HannesHolste/events{/privacy}","received_events_url":"https://api.github.com/users/HannesHolste/received_events","type":"User","site_admin":false},"repo":{"id":59692706,"name":"mds-approximations","full_name":"HannesHolste/mds-approximations","owner":{"login":"HannesHolste","id":4384130,"avatar_url":"https://avatars.githubusercontent.com/u/4384130?v=3","gravatar_id":"","url":"https://api.github.com/users/HannesHolste","html_url":"https://github.com/HannesHolste","followers_url":"https://api.github.com/users/HannesHolste/followers","following_url":"https://api.github.com/users/HannesHolste/following{/other_user}","gists_url":"https://api.github.com/users/HannesHolste/gists{/gist_id}","starred_url":"https://api.github.com/users/HannesHolste/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/HannesHolste/subscriptions","organizations_url":"https://api.github.com/users/HannesHolste/orgs","repos_url":"https://api.github.com/users/HannesHolste/repos","events_url":"https://api.github.com/users/HannesHolste/events{/privacy}","received_events_url":"https://api.github.com/users/HannesHolste/received_events","type":"User","site_admin":false},"private":false,"html_url":"https://github.com/HannesHolste/mds-approximations","description":"Repository 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