{"action":"created","issue":{"url":"https://api.github.com/repos/BgeeDB/expression-annotations/issues/109","labels_url":"https://api.github.com/repos/BgeeDB/expression-annotations/issues/109/labels{/name}","comments_url":"https://api.github.com/repos/BgeeDB/expression-annotations/issues/109/comments","events_url":"https://api.github.com/repos/BgeeDB/expression-annotations/issues/109/events","html_url":"https://github.com/BgeeDB/expression-annotations/issues/109","id":127947990,"number":109,"title":"Affymetrix chip types","user":{"login":"fbastian","id":3355124,"avatar_url":"https://avatars.githubusercontent.com/u/3355124?v=3","gravatar_id":"","url":"https://api.github.com/users/fbastian","html_url":"https://github.com/fbastian","followers_url":"https://api.github.com/users/fbastian/followers","following_url":"https://api.github.com/users/fbastian/following{/other_user}","gists_url":"https://api.github.com/users/fbastian/gists{/gist_id}","starred_url":"https://api.github.com/users/fbastian/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/fbastian/subscriptions","organizations_url":"https://api.github.com/users/fbastian/orgs","repos_url":"https://api.github.com/users/fbastian/repos","events_url":"https://api.github.com/users/fbastian/events{/privacy}","received_events_url":"https://api.github.com/users/fbastian/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":1,"created_at":"2016-01-21T15:21:03Z","updated_at":"2016-01-22T16:55:35Z","closed_at":null,"body":"Could you please provide me all the Affymetrix chip type IDs that we are using, or plan to use. Marta is going to compute the quality score threshold for us.\r\n\r\ncc @smoretti @julien-roux "},"comment":{"url":"https://api.github.com/repos/BgeeDB/expression-annotations/issues/comments/173976259","html_url":"https://github.com/BgeeDB/expression-annotations/issues/109#issuecomment-173976259","issue_url":"https://api.github.com/repos/BgeeDB/expression-annotations/issues/109","id":173976259,"user":{"login":"julien-roux","id":10435805,"avatar_url":"https://avatars.githubusercontent.com/u/10435805?v=3","gravatar_id":"","url":"https://api.github.com/users/julien-roux","html_url":"https://github.com/julien-roux","followers_url":"https://api.github.com/users/julien-roux/followers","following_url":"https://api.github.com/users/julien-roux/following{/other_user}","gists_url":"https://api.github.com/users/julien-roux/gists{/gist_id}","starred_url":"https://api.github.com/users/julien-roux/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/julien-roux/subscriptions","organizations_url":"https://api.github.com/users/julien-roux/orgs","repos_url":"https://api.github.com/users/julien-roux/repos","events_url":"https://api.github.com/users/julien-roux/events{/privacy}","received_events_url":"https://api.github.com/users/julien-roux/received_events","type":"User","site_admin":false},"created_at":"2016-01-22T16:55:35Z","updated_at":"2016-01-22T16:55:35Z","body":"In the annotation file, column `chipTypeId`: https://raw.githubusercontent.com/BgeeDB/expression-annotations/master/annotations/affymetrix/affymetrixChip.tsv\r\nEach chipTypeId listed in this file will be used I guess.\r\n\r\nWhy is this step not integrated in the pipeline? Is Marta going to document it and share the scripts, so that someone else in the team can rerun for next Bgee release? I guess this is the last chance to do so..."}}