{"action":"created","issue":{"url":"https://api.github.com/repos/antigenomics/vdjdb-db/issues/108","repository_url":"https://api.github.com/repos/antigenomics/vdjdb-db","labels_url":"https://api.github.com/repos/antigenomics/vdjdb-db/issues/108/labels{/name}","comments_url":"https://api.github.com/repos/antigenomics/vdjdb-db/issues/108/comments","events_url":"https://api.github.com/repos/antigenomics/vdjdb-db/issues/108/events","html_url":"https://github.com/antigenomics/vdjdb-db/issues/108","id":160882949,"number":108,"title":"add scoring for papers with putative MHC-restriction","user":{"login":"iziziz","id":12457001,"avatar_url":"https://avatars.githubusercontent.com/u/12457001?v=3","gravatar_id":"","url":"https://api.github.com/users/iziziz","html_url":"https://github.com/iziziz","followers_url":"https://api.github.com/users/iziziz/followers","following_url":"https://api.github.com/users/iziziz/following{/other_user}","gists_url":"https://api.github.com/users/iziziz/gists{/gist_id}","starred_url":"https://api.github.com/users/iziziz/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/iziziz/subscriptions","organizations_url":"https://api.github.com/users/iziziz/orgs","repos_url":"https://api.github.com/users/iziziz/repos","events_url":"https://api.github.com/users/iziziz/events{/privacy}","received_events_url":"https://api.github.com/users/iziziz/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/antigenomics/vdjdb-db/labels/maintainance","name":"maintainance","color":"e11d21"}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2016-06-17T13:01:45Z","updated_at":"2016-07-07T21:03:19Z","closed_at":null,"body":"add rule for scoring of CDR from papers where not possible to determine MHC-restriction for antigen explicitly.\r\nIt's only about such papers:\r\n- antigen-loaded-target or antigen-expressing-target isolation/verification\r\n- detection of clones on the basis of IFNg or TNF release\r\n- antigen-presenting cells should be positive for putative MHC-allele presenting the antigen\r\n- antigen peptide should be from \"commonly used\" pool: like NLV peptide\r\n\r\nE.g. clonotypes reactive against A*02-positive cells loaded by NLV peptide\r\n\r\nSuggestion:\r\nadd phrase \"putative MHC-restriction\" to method.isolation for such seqs\r\nadd putative MHC allele to mhc.a/mhc.b column(s)"},"comment":{"url":"https://api.github.com/repos/antigenomics/vdjdb-db/issues/comments/231206623","html_url":"https://github.com/antigenomics/vdjdb-db/issues/108#issuecomment-231206623","issue_url":"https://api.github.com/repos/antigenomics/vdjdb-db/issues/108","id":231206623,"user":{"login":"mikessh","id":6215797,"avatar_url":"https://avatars.githubusercontent.com/u/6215797?v=3","gravatar_id":"","url":"https://api.github.com/users/mikessh","html_url":"https://github.com/mikessh","followers_url":"https://api.github.com/users/mikessh/followers","following_url":"https://api.github.com/users/mikessh/following{/other_user}","gists_url":"https://api.github.com/users/mikessh/gists{/gist_id}","starred_url":"https://api.github.com/users/mikessh/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mikessh/subscriptions","organizations_url":"https://api.github.com/users/mikessh/orgs","repos_url":"https://api.github.com/users/mikessh/repos","events_url":"https://api.github.com/users/mikessh/events{/privacy}","received_events_url":"https://api.github.com/users/mikessh/received_events","type":"User","site_admin":false},"created_at":"2016-07-07T21:03:18Z","updated_at":"2016-07-07T21:03:18Z","body":"We also need to list such papers here"}}
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