{"action":"created","comment":{"url":"https://api.github.com/repos/cBioPortal/cbioportal/pulls/comments/62927571","id":62927571,"diff_hunk":"@@ -39,8 +39,8 @@\n import org.mskcc.cbio.portal.util.*;\n import org.mskcc.cbio.portal.util.XssRequestWrapper;\n import org.mskcc.cbio.portal.web_api.GetGeneticProfiles;\n-import org.mskcc.cbio.portal.validate.gene.GeneValidator;\n-import org.mskcc.cbio.portal.validate.gene.GeneValidationException;\n+//import org.mskcc.cbio.portal.validate.gene.GeneValidator;","path":"core/src/main/java/org/mskcc/cbio/portal/servlet/CrossCancerStudyServlet.java","position":6,"original_position":6,"commit_id":"9d393778ce05debec7e5e59349ad1bde1cc7b050","original_commit_id":"9d393778ce05debec7e5e59349ad1bde1cc7b050","user":{"login":"jjgao","id":840895,"avatar_url":"https://avatars.githubusercontent.com/u/840895?v=3","gravatar_id":"","url":"https://api.github.com/users/jjgao","html_url":"https://github.com/jjgao","followers_url":"https://api.github.com/users/jjgao/followers","following_url":"https://api.github.com/users/jjgao/following{/other_user}","gists_url":"https://api.github.com/users/jjgao/gists{/gist_id}","starred_url":"https://api.github.com/users/jjgao/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jjgao/subscriptions","organizations_url":"https://api.github.com/users/jjgao/orgs","repos_url":"https://api.github.com/users/jjgao/repos","events_url":"https://api.github.com/users/jjgao/events{/privacy}","received_events_url":"https://api.github.com/users/jjgao/received_events","type":"User","site_admin":false},"body":"please remove the code instead of commenting out.","created_at":"2016-05-11T21:10:45Z","updated_at":"2016-05-11T21:10:45Z","html_url":"https://github.com/cBioPortal/cbioportal/pull/931#discussion_r62927571","pull_request_url":"https://api.github.com/repos/cBioPortal/cbioportal/pulls/931","_links":{"self":{"href":"https://api.github.com/repos/cBioPortal/cbioportal/pulls/comments/62927571"},"html":{"href":"https://github.com/cBioPortal/cbioportal/pull/931#discussion_r62927571"},"pull_request":{"href":"https://api.github.com/repos/cBioPortal/cbioportal/pulls/931"}}},"pull_request":{"url":"https://api.github.com/repos/cBioPortal/cbioportal/pulls/931","id":63090967,"html_url":"https://github.com/cBioPortal/cbioportal/pull/931","diff_url":"https://github.com/cBioPortal/cbioportal/pull/931.diff","patch_url":"https://github.com/cBioPortal/cbioportal/pull/931.patch","issue_url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/931","number":931,"state":"open","locked":false,"title":"Front-end OQL clean up","user":{"login":"yichaoS","id":5973438,"avatar_url":"https://avatars.githubusercontent.com/u/5973438?v=3","gravatar_id":"","url":"https://api.github.com/users/yichaoS","html_url":"https://github.com/yichaoS","followers_url":"https://api.github.com/users/yichaoS/followers","following_url":"https://api.github.com/users/yichaoS/following{/other_user}","gists_url":"https://api.github.com/users/yichaoS/gists{/gist_id}","starred_url":"https://api.github.com/users/yichaoS/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/yichaoS/subscriptions","organizations_url":"https://api.github.com/users/yichaoS/orgs","repos_url":"https://api.github.com/users/yichaoS/repos","events_url":"https://api.github.com/users/yichaoS/events{/privacy}","received_events_url":"https://api.github.com/users/yichaoS/received_events","type":"User","site_admin":false},"body":"- [x] IGV launch button **(Karthik)**\r\n- [x] dynamically check the total number of query genes (no more than 100) at the front-end **(Yichao)**\r\n- [x] \"Download Data\" tab in the main query form**(Yichao)**\r\n- [x] study view \"query gene\" box **(Karthik)**\r\n- [x] double check if every gene input box / URL gene list interpretation is dynamically querying CheckGeneSymbol.json to validate gene list**(Yichao)**/**(Karthik)**\r\n","created_at":"2016-03-16T16:08:09Z","updated_at":"2016-05-11T21:10:45Z","closed_at":null,"merged_at":null,"merge_commit_sha":"83a59efa557d58d9023e4354d1276ad2f55c1024","assignee":null,"milestone":null,"commits_url":"https://api.github.com/repos/cBioPortal/cbioportal/pulls/931/commits","review_comments_url":"https://api.github.com/repos/cBioPortal/cbioportal/pulls/931/comments","review_comment_url":"https://api.github.com/repos/cBioPortal/cbioportal/pulls/comments{/number}","comments_url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/931/comments","statuses_url":"https://api.github.com/repos/cBioPortal/cbioportal/statuses/9d393778ce05debec7e5e59349ad1bde1cc7b050","head":{"label":"yichaoS:backend-oql-cleanup","ref":"backend-oql-cleanup","sha":"9d393778ce05debec7e5e59349ad1bde1cc7b050","user":{"login":"yichaoS","id":5973438,"avatar_url":"https://avatars.githubusercontent.com/u/5973438?v=3","gravatar_id":"","url":"https://api.github.com/users/yichaoS","html_url":"https://github.com/yichaoS","followers_url":"https://api.github.com/users/yichaoS/followers","following_url":"https://api.github.com/users/yichaoS/following{/other_user}","gists_url":"https://api.github.com/users/yichaoS/gists{/gist_id}","starred_url":"https://api.github.com/users/yichaoS/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/yichaoS/subscriptions","organizations_url":"https://api.github.com/users/yichaoS/orgs","repos_url":"https://api.github.com/users/yichaoS/repos","events_url":"https://api.github.com/users/yichaoS/events{/privacy}","received_events_url":"https://api.github.com/users/yichaoS/received_events","type":"User","site_admin":false},"repo":{"id":36525200,"name":"cbioportal","full_name":"yichaoS/cbioportal","owner":{"login":"yichaoS","id":5973438,"avatar_url":"https://avatars.githubusercontent.com/u/5973438?v=3","gravatar_id":"","url":"https://api.github.com/users/yichaoS","html_url":"https://github.com/yichaoS","followers_url":"https://api.github.com/users/yichaoS/followers","following_url":"https://api.github.com/users/yichaoS/following{/other_user}","gists_url":"https://api.github.com/users/yichaoS/gists{/gist_id}","starred_url":"https://api.github.com/users/yichaoS/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/yichaoS/subscriptions","organizations_url":"https://api.github.com/users/yichaoS/orgs","repos_url":"https://api.github.com/users/yichaoS/repos","events_url":"https://api.github.com/users/yichaoS/events{/privacy}","received_events_url":"https://api.github.com/users/yichaoS/received_events","type":"User","site_admin":false},"private":false,"html_url":"https://github.com/yichaoS/cbioportal","description":"","fork":true,"url":"https://api.github.com/repos/yichaoS/cbioportal","forks_url":"https://api.github.com/repos/yichaoS/cbioportal/forks","keys_url":"https://api.github.com/repos/yichaoS/cbioportal/keys{/key_id}","collaborators_url":"https://api.github.com/repos/yichaoS/cbioportal/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/yichaoS/cbioportal/teams","hooks_url":"https://api.github.com/repos/yichaoS/cbioportal/hooks","issue_events_url":"https://api.github.com/repos/yichaoS/cbioportal/issues/events{/number}","events_url":"https://api.github.com/repos/yichaoS/cbioportal/events","assignees_url":"https://api.github.com/repos/yichaoS/cbioportal/assignees{/user}","branches_url":"https://api.github.com/repos/yichaoS/cbioportal/branches{/branch}","tags_url":"https://api.github.com/repos/yichaoS/cbioportal/tags","blobs_url":"https://api.github.com/repos/yichaoS/cbioportal/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/yichaoS/cbioportal/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/yichaoS/cbioportal/git/refs{/sha}","trees_url":"https://api.github.com/repos/yichaoS/cbioportal/git/trees{/sha}","statuses_url":"https://api.github.com/repos/yichaoS/cbioportal/statuses/{sha}","languages_url":"https://api.github.com/repos/yichaoS/cbioportal/languages","stargazers_url":"https://api.github.com/repos/yichaoS/cbioportal/stargazers","contributors_url":"https://api.github.com/repos/yichaoS/cbioportal/contributors","subscribers_url":"https://api.github.com/repos/yichaoS/cbioportal/subscribers","subscription_url":"https://api.github.com/repos/yichaoS/cbioportal/subscription","commits_url":"https://api.github.com/repos/yichaoS/cbioportal/commits{/sha}","git_commits_url":"https://api.github.com/repos/yichaoS/cbioportal/git/commits{/sha}","comments_url":"https://api.github.com/repos/yichaoS/cbioportal/comments{/number}","issue_comment_url":"https://api.github.com/repos/yichaoS/cbioportal/issues/comments{/number}","contents_url":"https://api.github.com/repos/yichaoS/cbioportal/contents/{+path}","compare_url":"https://api.github.com/repos/yichaoS/cbioportal/compare/{base}...{head}","merges_url":"https://api.github.com/repos/yichaoS/cbioportal/merges","archive_url":"https://api.github.com/repos/y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