{"action":"opened","number":77,"pull_request":{"url":"https://api.github.com/repos/rqtl/qtl2geno/pulls/77","id":60752702,"html_url":"https://github.com/rqtl/qtl2geno/pull/77","diff_url":"https://github.com/rqtl/qtl2geno/pull/77.diff","patch_url":"https://github.com/rqtl/qtl2geno/pull/77.patch","issue_url":"https://api.github.com/repos/rqtl/qtl2geno/issues/77","number":77,"state":"open","locked":false,"title":"Change calc_kinship back","user":{"login":"kbroman","id":53972,"avatar_url":"https://avatars.githubusercontent.com/u/53972?v=3","gravatar_id":"","url":"https://api.github.com/users/kbroman","html_url":"https://github.com/kbroman","followers_url":"https://api.github.com/users/kbroman/followers","following_url":"https://api.github.com/users/kbroman/following{/other_user}","gists_url":"https://api.github.com/users/kbroman/gists{/gist_id}","starred_url":"https://api.github.com/users/kbroman/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kbroman/subscriptions","organizations_url":"https://api.github.com/users/kbroman/orgs","repos_url":"https://api.github.com/users/kbroman/repos","events_url":"https://api.github.com/users/kbroman/events{/privacy}","received_events_url":"https://api.github.com/users/kbroman/received_events","type":"User","site_admin":false},"body":"- Had previous changed `calc_kinship()` to return 2x the kinship matrix (but then normalized). Changed this back, since when we normalize, it makes no difference.\r\n- Fix url for Kang et al (2010) paper to avoid warning from `R CMD check`.","created_at":"2016-02-25T21:46:11Z","updated_at":"2016-02-25T21:46:11Z","closed_at":null,"merged_at":null,"merge_commit_sha":"98b260332a1caf26980b0e919806be10e6243a4b","assignee":null,"milestone":null,"commits_url":"https://api.github.com/repos/rqtl/qtl2geno/pulls/77/commits","review_comments_url":"https://api.github.com/repos/rqtl/qtl2geno/pulls/77/comments","review_comment_url":"https://api.github.com/repos/rqtl/qtl2geno/pulls/comments{/number}","comments_url":"https://api.github.com/repos/rqtl/qtl2geno/issues/77/comments","statuses_url":"https://api.github.com/repos/rqtl/qtl2geno/statuses/2128a8d556ff247717a6478e0320a50f9b33c44b","head":{"label":"kbroman:master","ref":"master","sha":"2128a8d556ff247717a6478e0320a50f9b33c44b","user":{"login":"kbroman","id":53972,"avatar_url":"https://avatars.githubusercontent.com/u/53972?v=3","gravatar_id":"","url":"https://api.github.com/users/kbroman","html_url":"https://github.com/kbroman","followers_url":"https://api.github.com/users/kbroman/followers","following_url":"https://api.github.com/users/kbroman/following{/other_user}","gists_url":"https://api.github.com/users/kbroman/gists{/gist_id}","starred_url":"https://api.github.com/users/kbroman/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kbroman/subscriptions","organizations_url":"https://api.github.com/users/kbroman/orgs","repos_url":"https://api.github.com/users/kbroman/repos","events_url":"https://api.github.com/users/kbroman/events{/privacy}","received_events_url":"https://api.github.com/users/kbroman/received_events","type":"User","site_admin":false},"repo":{"id":36658671,"name":"qtl2geno","full_name":"kbroman/qtl2geno","owner":{"login":"kbroman","id":53972,"avatar_url":"https://avatars.githubusercontent.com/u/53972?v=3","gravatar_id":"","url":"https://api.github.com/users/kbroman","html_url":"https://github.com/kbroman","followers_url":"https://api.github.com/users/kbroman/followers","following_url":"https://api.github.com/users/kbroman/following{/other_user}","gists_url":"https://api.github.com/users/kbroman/gists{/gist_id}","starred_url":"https://api.github.com/users/kbroman/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kbroman/subscriptions","organizations_url":"https://api.github.com/users/kbroman/orgs","repos_url":"https://api.github.com/users/kbroman/repos","events_url":"https://api.github.com/users/kbroman/events{/privacy}","received_events_url":"https://api.github.com/users/kbroman/received_events","type":"User","site_admin":false},"private":false,"html_url":"https://github.com/kbroman/qtl2geno","description":"R/qtl2 module for treatment of genotypes (imputation, probability calculation, map estimation)","fork":true,"url":"https://api.github.com/repos/kbroman/qtl2geno","forks_url":"https://api.github.com/repos/kbroman/qtl2geno/forks","keys_url":"https://api.github.com/repos/kbroman/qtl2geno/keys{/key_id}","collaborators_url":"https://api.github.com/repos/kbroman/qtl2geno/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/kbroman/qtl2geno/teams","hooks_url":"https://api.github.com/repos/kbroman/qtl2geno/hooks","issue_events_url":"https://api.github.com/repos/kbroman/qtl2geno/issues/events{/number}","events_url":"https://api.github.com/repos/kbroman/qtl2geno/events","assignees_url":"https://api.github.com/repos/kbroman/qtl2geno/assignees{/user}","branches_url":"https://api.github.com/repos/kbroman/qtl2geno/branches{/branch}","tags_url":"https://api.github.com/repos/kbroman/qtl2geno/tags","blobs_url":"https://api.github.com/repos/kbroman/qtl2geno/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/kbroman/qtl2geno/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/kbroman/qtl2geno/git/refs{/sha}","trees_url":"https://api.github.com/repos/kbroman/qtl2geno/git/trees{/sha}","statuses_url":"https://api.github.com/repos/kbroman/qtl2geno/statuses/{sha}","languages_url":"https://api.github.com/repos/kbroman/qtl2geno/languages","stargazers_url":"https://api.github.com/repos/kbroman/qtl2geno/stargazers","contributors_url":"https://api.github.com/repos/kbroman/qtl2geno/contributors","subscribers_url":"https://api.github.com/repos/kbroman/qtl2geno/subscribers","subscription_url":"https://api.github.com/repos/kbroman/qtl2geno/subscription","commits_url":"https://api.github.com/repos/kbroman/qtl2geno/commits{/sha}","git_commits_url":"https://api.github.com/repos/kbroman/qtl2geno/git/commits{/sha}","comments_url":"https://api.github.com/repos/kbroman/qtl2geno/comments{/number}","issue_comment_url":"https://api.github.com/repos/kbroman/qtl2geno/issues/comments{/number}","contents_url":"https://api.github.com/repos/kbroman/qtl2geno/contents/{+path}","compare_url":"https://api.github.com/repos/kbroman/qtl2geno/compare/{base}...{head}","merges_url":"https://api.github.com/repos/kbroman/qtl2geno/merges","archive_url":"https://api.github.com/repos/kbroman/qtl2geno/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/kbroman/qtl2geno/downloads","issues_url":"https://api.github.com/repos/kbroman/qtl2geno/issues{/number}","pulls_url":"https://api.github.com/repos/kbroman/qtl2geno/pulls{/number}","milestones_url":"https://api.github.com/repos/kbroman/qtl2geno/milestones{/number}","notifications_url":"https://api.github.com/repos/kbroman/qtl2geno/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/kbroman/qtl2geno/labels{/name}","releases_url":"https://api.github.com/repos/kbroman/qtl2geno/releases{/id}","deployments_url":"https://api.github.com/repos/kbroman/qtl2geno/deployments","created_at":"2015-06-01T12:16:22Z","updated_at":"2016-02-19T21:35:00Z","pushed_at":"2016-02-25T21:43:41Z","git_url":"git://github.com/kbroman/qtl2geno.git","ssh_url":"git@github.com:kbroman/qtl2geno.git","clone_url":"https://github.com/kbroman/qtl2geno.git","svn_url":"https://github.com/kbroman/qtl2geno","homepage":null,"size":1097,"stargazers_count":0,"watchers_count":0,"language":"R","has_issues":false,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":0,"mirror_url":null,"open_issues_count":0,"forks":0,"open_issues":0,"watchers":0,"default_branch":"master"}},"base":{"label":"rqtl:master","ref":"master","sha":"233e834f374df7e865c1a206caa3d43bc954d1e8","user":{"login":"rqtl","id":9142954,"avatar_url":"https://avatars.githubusercontent.com/u/9142954?v=3","gravatar_id":"","url":"https://api.github.com/users/rqtl","html_url":"https://github.com/rqtl","followers_url":"https://api.github.com/users/rqtl/followers","following_url":"https://api.github.com/users/rqtl/following{/other_user}","gists_url":"https://api.github.com/users/rqtl/gists{/gist_id}","starred_url":"https://api.github.com/users/rqtl/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/rqtl/subscriptions","organizations_url":"https://api.github.com/users/rqtl/orgs","repos_url":"https://api.github.com/users/rqtl/repos","events_url":"https://api.github.com/users/rqtl/events{/privacy}","received_events_url":"https://api.github.com/users/rqtl/received_events","type":"Organization","site_admin":false},"repo":{"id":36658201,"name":"qtl2geno","full_name":"rqtl/qtl2geno","owner":{"login":"rqtl","id":9142954,"avatar_url":"https://avatars.githubusercontent.com/u/9142954?v=3","gravatar_id":"","url":"https://api.github.com/users/rqtl","html_url":"https://github.com/rqtl","followers_url":"https://api.github.com/users/rqtl/followers","following_url":"https://api.github.com/users/rqtl/following{/other_user}","gists_url":"https://api.github.com/users/rqtl/gists{/gist_id}","starred_url":"https://api.github.com/users/rqtl/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/rqtl/subscriptions","organizations_url":"https://api.github.com/users/rqtl/orgs","repos_url":"https://api.github.com/users/rqtl/repos","events_url":"https://api.github.com/users/rqtl/events{/privacy}","received_events_url":"https://api.github.com/users/rqtl/received_events","type":"Organization","site_admin":false},"private":false,"html_url":"https://github.com/rqtl/qtl2geno","description":"R/qtl2 module for treatment of genotypes (imputation, probability calculation, map estimation)","fork":false,"url":"https://api.github.com/repos/rqtl/qtl2geno","forks_url":"https://api.github.com/repos/rqtl/qtl2geno/forks","keys_url":"https://api.github.com/repos/rqtl/qtl2geno/keys{/key_id}","collaborators_url":"https://api.github.com/repos/rqtl/qtl2geno/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/rqtl/qtl2geno/teams","hooks_url":"https://api.github.com/repos/rqtl/qtl2geno/hooks","issue_events_url":"https://api.github.com/repos/rqtl/qtl2geno/issues/events{/number}","events_url":"https://api.github.com/repos/rqtl/qtl2geno/events","assignees_url":"https://api.github.com/repos/rqtl/qtl2geno/assignees{/user}","branches_url":"https://api.github.com/repos/rqtl/qtl2geno/branches{/branch}","tags_url":"https://api.github.com/repos/rqtl/qtl2geno/tags","blobs_url":"https://api.github.com/repos/rqtl/qtl2geno/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/rqtl/qtl2geno/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/rqtl/qtl2geno/git/refs{/sha}","trees_url":"https://api.github.com/repos/rqtl/qtl2geno/git/trees{/sha}","statuses_url":"https://api.github.com/repos/rqtl/qtl2geno/statuses/{sha}","languages_url":"https://api.github.com/repos/rqtl/qtl2geno/languages","stargazers_url":"https://api.github.com/repos/rqtl/qtl2geno/stargazers","contributors_url":"https://api.github.com/repos/rqtl/qtl2geno/contributors","subscribers_url":"https://api.github.com/repos/rqtl/qtl2geno/subscribers","subscription_url":"https://api.github.com/repos/rqtl/qtl2geno/subscription","commits_url":"https://api.github.com/repos/rqtl/qtl2geno/commits{/sha}","git_commits_url":"https://api.github.com/repos/rqtl/qtl2geno/git/commits{/sha}","comments_url":"https://api.github.com/repos/rqtl/qtl2geno/comments{/number}","issue_comment_url":"https://api.github.com/repos/rqtl/qtl2geno/issues/comments{/number}","contents_url":"https://api.github.com/repos/rqtl/qtl2geno/contents/{+path}","compare_url":"https://api.github.com/repos/rqtl/qtl2geno/compare/{base}...{head}","merges_url":"https://api.github.com/repos/rqtl/qtl2geno/merges","archive_url":"https://api.github.com/repos/rqtl/qtl2geno/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/rqtl/qtl2geno/downloads","issues_url":"https://api.github.com/repos/rqtl/qtl2geno/issues{/number}","pulls_url":"https://api.github.com/repos/rqtl/qtl2geno/pulls{/number}","milestones_url":"https://api.github.com/repos/rqtl/qtl2geno/milestones{/number}","notifications_url":"https://api.github.com/repos/rqtl/qtl2geno/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/rqtl/qtl2geno/labels{/name}","releases_url":"https://api.github.com/repos/rqtl/qtl2geno/releases{/id}","deployments_url":"https://api.github.com/repos/rqtl/qtl2geno/deployments","created_at":"2015-06-01T12:06:55Z","updated_at":"2016-02-19T23:27:42Z","pushed_at":"2016-02-25T21:46:11Z","git_url":"git://github.com/rqtl/qtl2geno.git","ssh_url":"git@github.com:rqtl/qtl2geno.git","clone_url":"https://github.com/rqtl/qtl2geno.git","svn_url":"https://github.com/rqtl/qtl2geno","homepage":null,"size":1077,"stargazers_count":2,"watchers_count":2,"language":"R","has_issues":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":1,"mirror_url":null,"open_issues_count":3,"forks":1,"open_issues":3,"watchers":2,"default_branch":"master"}},"_links":{"self":{"href":"https://api.github.com/repos/rqtl/qtl2geno/pulls/77"},"html":{"href":"https://github.com/rqtl/qtl2geno/pull/77"},"issue":{"href":"https://api.github.com/repos/rqtl/qtl2geno/issues/77"},"comments":{"href":"https://api.github.com/repos/rqtl/qtl2geno/issues/77/comments"},"review_comments":{"href":"https://api.github.com/repos/rqtl/qtl2geno/pulls/77/comments"},"review_comment":{"href":"https://api.github.com/repos/rqtl/qtl2geno/pulls/comments{/number}"},"commits":{"href":"https://api.github.com/repos/rqtl/qtl2geno/pulls/77/commits"},"statuses":{"href":"https://api.github.com/repos/rqtl/qtl2geno/statuses/2128a8d556ff247717a6478e0320a50f9b33c44b"}},"merged":false,"mergeable":true,"mergeable_state":"clean","merged_by":null,"comments":0,"review_comments":0,"commits":3,"additions":12,"deletions":13,"changed_files":4}}