{"action":"created","issue":{"url":"https://api.github.com/repos/monarch-initiative/dipper/issues/287","repository_url":"https://api.github.com/repos/monarch-initiative/dipper","labels_url":"https://api.github.com/repos/monarch-initiative/dipper/issues/287/labels{/name}","comments_url":"https://api.github.com/repos/monarch-initiative/dipper/issues/287/comments","events_url":"https://api.github.com/repos/monarch-initiative/dipper/issues/287/events","html_url":"https://github.com/monarch-initiative/dipper/issues/287","id":146960480,"number":287,"title":"Run diff on OMIM OMIM-HPO vs. HPO OMIM-HPO profiles","user":{"login":"mellybelly","id":796636,"avatar_url":"https://avatars.githubusercontent.com/u/796636?v=3","gravatar_id":"","url":"https://api.github.com/users/mellybelly","html_url":"https://github.com/mellybelly","followers_url":"https://api.github.com/users/mellybelly/followers","following_url":"https://api.github.com/users/mellybelly/following{/other_user}","gists_url":"https://api.github.com/users/mellybelly/gists{/gist_id}","starred_url":"https://api.github.com/users/mellybelly/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mellybelly/subscriptions","organizations_url":"https://api.github.com/users/mellybelly/orgs","repos_url":"https://api.github.com/users/mellybelly/repos","events_url":"https://api.github.com/users/mellybelly/events{/privacy}","received_events_url":"https://api.github.com/users/mellybelly/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/monarch-initiative/dipper/labels/hpo","name":"hpo","color":"dd7aea"},{"url":"https://api.github.com/repos/monarch-initiative/dipper/labels/omim","name":"omim","color":"dd7aea"},{"url":"https://api.github.com/repos/monarch-initiative/dipper/labels/test","name":"test","color":"eb6420"}],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":13,"created_at":"2016-04-08T15:30:13Z","updated_at":"2016-04-26T18:23:35Z","closed_at":null,"body":"OMIM is running their own text matching pipeline to assign HPO terms to their clinical synopsis terms, thereby auto-creating OMIM HPO profiles. These may or may not be similar to our automated+manual pipeline. \r\n\r\nIdeally we would provide these back to them rather then them creating a different set. Note that this set is available via their API and is being used to generate content in MedGen.\r\n\r\nAPI keys are easy to get here: http://omim.org/help/api\r\nI have one if anyone needs.\r\n\r\nSo.. need to compare the data in the OMIM API: http://api.omim.org/api/search/clinicalSynopsis\r\nvs. what we have here: https://github.com/monarch-initiative/hpo-annotation-data\r\n\r\n@kshefchek or @TomConlin perhaps you can help? \r\n@cmungall @drseb please provide requirements for the analysis. \r\nI think we want to know things like how many are identical, how many are missing from either set, and for those with mismatches what is the difference based on graph distance or some other measure.\r\n"},"comment":{"url":"https://api.github.com/repos/monarch-initiative/dipper/issues/comments/214838335","html_url":"https://github.com/monarch-initiative/dipper/issues/287#issuecomment-214838335","issue_url":"https://api.github.com/repos/monarch-initiative/dipper/issues/287","id":214838335,"user":{"login":"TomConlin","id":1911895,"avatar_url":"https://avatars.githubusercontent.com/u/1911895?v=3","gravatar_id":"","url":"https://api.github.com/users/TomConlin","html_url":"https://github.com/TomConlin","followers_url":"https://api.github.com/users/TomConlin/followers","following_url":"https://api.github.com/users/TomConlin/following{/other_user}","gists_url":"https://api.github.com/users/TomConlin/gists{/gist_id}","starred_url":"https://api.github.com/users/TomConlin/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/TomConlin/subscriptions","organizations_url":"https://api.github.com/users/TomConlin/orgs","repos_url":"https://api.github.com/users/TomConlin/repos","events_url":"https://api.github.com/users/TomConlin/events{/privacy}","received_events_url":"https://api.github.com/users/TomConlin/received_events","type":"User","site_admin":false},"created_at":"2016-04-26T18:23:35Z","updated_at":"2016-04-26T18:23:35Z","body":"@drseb  I would not mind being privy to your process if you do\r\n"}}