{"action":"opened","issue":{"url":"https://api.github.com/repos/andrej-fischer/cloneHD/issues/17","repository_url":"https://api.github.com/repos/andrej-fischer/cloneHD","labels_url":"https://api.github.com/repos/andrej-fischer/cloneHD/issues/17/labels{/name}","comments_url":"https://api.github.com/repos/andrej-fischer/cloneHD/issues/17/comments","events_url":"https://api.github.com/repos/andrej-fischer/cloneHD/issues/17/events","html_url":"https://github.com/andrej-fischer/cloneHD/issues/17","id":162300144,"number":17,"title":"Segmentation Fault","user":{"login":"afichtenholtz","id":20145515,"avatar_url":"https://avatars.githubusercontent.com/u/20145515?v=3","gravatar_id":"","url":"https://api.github.com/users/afichtenholtz","html_url":"https://github.com/afichtenholtz","followers_url":"https://api.github.com/users/afichtenholtz/followers","following_url":"https://api.github.com/users/afichtenholtz/following{/other_user}","gists_url":"https://api.github.com/users/afichtenholtz/gists{/gist_id}","starred_url":"https://api.github.com/users/afichtenholtz/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/afichtenholtz/subscriptions","organizations_url":"https://api.github.com/users/afichtenholtz/orgs","repos_url":"https://api.github.com/users/afichtenholtz/repos","events_url":"https://api.github.com/users/afichtenholtz/events{/privacy}","received_events_url":"https://api.github.com/users/afichtenholtz/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2016-06-25T21:19:47Z","updated_at":"2016-06-25T21:19:47Z","closed_at":null,"body":"Running the example test set I run into a seg fault:\r\n\r\n# ./build/filterHD --data ./test/data//normal.cna.txt --mode 3 --pre ./test/results//normal.cna\r\n\r\nfilterHD: Fitting jump-diffusion model to data at 20001 loci in 1 segment(s) in 1 sample(s) with a poisson emission model:\r\n\r\nFiltering sample 1 of 1:\r\nInitial range is 3.801e+01 < x < 8.500e+01\r\neval jump        sigma       rnd         -llh\r\n  10 1.71212e-06 7.74107e-04 3.80764e-05 6.9367034070e+04\r\n  20 3.49225e-08 7.03853e-04 1.87274e-04 6.9362282092e+04\r\n  30 1.98473e-09 7.61654e-04 3.09235e-04 6.9361873946e+04\r\n  40 1.07903e-09 7.62688e-04 7.27041e-05 6.9361621633e+04\r\nAdapted range to 5.493e+01 < x < 6.526e+01\r\n  10 1.32967e-09 7.25762e-04 2.95731e-05 6.9359987522e+04\r\n  20 1.05477e-09 7.33552e-04 1.30669e-05 6.9359948984e+04\r\n  30 1.03791e-09 7.37987e-04 9.48939e-07 6.9359941037e+04\r\nSegmentation fault (core dumped)"}}
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