{"action":"created","issue":{"url":"https://api.github.com/repos/bigdatagenomics/adam/issues/1045","repository_url":"https://api.github.com/repos/bigdatagenomics/adam","labels_url":"https://api.github.com/repos/bigdatagenomics/adam/issues/1045/labels{/name}","comments_url":"https://api.github.com/repos/bigdatagenomics/adam/issues/1045/comments","events_url":"https://api.github.com/repos/bigdatagenomics/adam/issues/1045/events","html_url":"https://github.com/bigdatagenomics/adam/pull/1045","id":158750022,"number":1045,"title":"[ADAM-952] Expose sorting by reference index.","user":{"login":"fnothaft","id":3752466,"avatar_url":"https://avatars.githubusercontent.com/u/3752466?v=3","gravatar_id":"","url":"https://api.github.com/users/fnothaft","html_url":"https://github.com/fnothaft","followers_url":"https://api.github.com/users/fnothaft/followers","following_url":"https://api.github.com/users/fnothaft/following{/other_user}","gists_url":"https://api.github.com/users/fnothaft/gists{/gist_id}","starred_url":"https://api.github.com/users/fnothaft/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/fnothaft/subscriptions","organizations_url":"https://api.github.com/users/fnothaft/orgs","repos_url":"https://api.github.com/users/fnothaft/repos","events_url":"https://api.github.com/users/fnothaft/events{/privacy}","received_events_url":"https://api.github.com/users/fnothaft/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":{"url":"https://api.github.com/repos/bigdatagenomics/adam/milestones/14","html_url":"https://github.com/bigdatagenomics/adam/milestones/0.20.0","labels_url":"https://api.github.com/repos/bigdatagenomics/adam/milestones/14/labels","id":1488918,"number":14,"title":"0.20.0","description":"","creator":{"login":"fnothaft","id":3752466,"avatar_url":"https://avatars.githubusercontent.com/u/3752466?v=3","gravatar_id":"","url":"https://api.github.com/users/fnothaft","html_url":"https://github.com/fnothaft","followers_url":"https://api.github.com/users/fnothaft/followers","following_url":"https://api.github.com/users/fnothaft/following{/other_user}","gists_url":"https://api.github.com/users/fnothaft/gists{/gist_id}","starred_url":"https://api.github.com/users/fnothaft/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/fnothaft/subscriptions","organizations_url":"https://api.github.com/users/fnothaft/orgs","repos_url":"https://api.github.com/users/fnothaft/repos","events_url":"https://api.github.com/users/fnothaft/events{/privacy}","received_events_url":"https://api.github.com/users/fnothaft/received_events","type":"User","site_admin":false},"open_issues":14,"closed_issues":12,"state":"open","created_at":"2016-01-07T06:15:27Z","updated_at":"2016-06-17T16:04:38Z","due_on":"2016-05-31T07:00:00Z","closed_at":null},"comments":8,"created_at":"2016-06-06T19:02:35Z","updated_at":"2016-06-17T16:32:46Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/bigdatagenomics/adam/pulls/1045","html_url":"https://github.com/bigdatagenomics/adam/pull/1045","diff_url":"https://github.com/bigdatagenomics/adam/pull/1045.diff","patch_url":"https://github.com/bigdatagenomics/adam/pull/1045.patch"},"body":"Resolves #952. Adds function `sortByReferenceIndexAndPosition` on RDDs of `AlignmentRecord`. This sorts reads by their position on a contig, where contigs are ordered by contig index. This conforms to the SAM/BAM sort order."},"comment":{"url":"https://api.github.com/repos/bigdatagenomics/adam/issues/comments/226817289","html_url":"https://github.com/bigdatagenomics/adam/pull/1045#issuecomment-226817289","issue_url":"https://api.github.com/repos/bigdatagenomics/adam/issues/1045","id":226817289,"user":{"login":"fnothaft","id":3752466,"avatar_url":"https://avatars.githubusercontent.com/u/3752466?v=3","gravatar_id":"","url":"https://api.github.com/users/fnothaft","html_url":"https://github.com/fnothaft","followers_url":"https://api.github.com/users/fnothaft/followers","following_url":"https://api.github.com/users/fnothaft/following{/other_user}","gists_url":"https://api.github.com/users/fnothaft/gists{/gist_id}","starred_url":"https://api.github.com/users/fnothaft/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/fnothaft/subscriptions","organizations_url":"https://api.github.com/users/fnothaft/orgs","repos_url":"https://api.github.com/users/fnothaft/repos","events_url":"https://api.github.com/users/fnothaft/events{/privacy}","received_events_url":"https://api.github.com/users/fnothaft/received_events","type":"User","site_admin":false},"created_at":"2016-06-17T16:32:46Z","updated_at":"2016-06-17T16:32:46Z","body":"Just patched this up with @ryan-williams's review comments and rebased."}}
{"actor":{"display_login":"fnothaft"}}