{"action":"opened","issue":{"url":"https://api.github.com/repos/lakinsm/wgs-meg/issues/8","repository_url":"https://api.github.com/repos/lakinsm/wgs-meg","labels_url":"https://api.github.com/repos/lakinsm/wgs-meg/issues/8/labels{/name}","comments_url":"https://api.github.com/repos/lakinsm/wgs-meg/issues/8/comments","events_url":"https://api.github.com/repos/lakinsm/wgs-meg/issues/8/events","html_url":"https://github.com/lakinsm/wgs-meg/issues/8","id":166645689,"number":8,"title":"To-Do list from 6/20 meeting","user":{"login":"noellenoyes","id":14238932,"avatar_url":"https://avatars.githubusercontent.com/u/14238932?v=3","gravatar_id":"","url":"https://api.github.com/users/noellenoyes","html_url":"https://github.com/noellenoyes","followers_url":"https://api.github.com/users/noellenoyes/followers","following_url":"https://api.github.com/users/noellenoyes/following{/other_user}","gists_url":"https://api.github.com/users/noellenoyes/gists{/gist_id}","starred_url":"https://api.github.com/users/noellenoyes/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/noellenoyes/subscriptions","organizations_url":"https://api.github.com/users/noellenoyes/orgs","repos_url":"https://api.github.com/users/noellenoyes/repos","events_url":"https://api.github.com/users/noellenoyes/events{/privacy}","received_events_url":"https://api.github.com/users/noellenoyes/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2016-07-20T18:10:10Z","updated_at":"2016-07-20T18:10:10Z","closed_at":null,"body":"In this order:\r\n\r\n1. Install iMetAMOS components as stand-alone; includes:  -- CHRIS\r\n\r\n- kmerGenie\r\n- EAutils\r\n- all 5 assemblers\r\n- kraken\r\n \r\n\r\n2. Move all pipeline components into their \"final resting place\" on server -- CHRIS\r\n3. Test out all components of pipeline with a single sample -- NOELLE\r\n4. Change pipeline script to replace iMetAMOS with all of the individual components -- STEVEN (Noelle will send commands for the individual components)\r\n5. Create a custom prokka DB for salmonella -- NOELLE\r\n"}}
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