{"action":"created","issue":{"url":"https://api.github.com/repos/bioconda/bioconda-recipes/issues/1805","repository_url":"https://api.github.com/repos/bioconda/bioconda-recipes","labels_url":"https://api.github.com/repos/bioconda/bioconda-recipes/issues/1805/labels{/name}","comments_url":"https://api.github.com/repos/bioconda/bioconda-recipes/issues/1805/comments","events_url":"https://api.github.com/repos/bioconda/bioconda-recipes/issues/1805/events","html_url":"https://github.com/bioconda/bioconda-recipes/pull/1805","id":161633470,"number":1805,"title":"Update: GATK and gvcf_regions","user":{"login":"chapmanb","id":39391,"avatar_url":"https://avatars.githubusercontent.com/u/39391?v=3","gravatar_id":"","url":"https://api.github.com/users/chapmanb","html_url":"https://github.com/chapmanb","followers_url":"https://api.github.com/users/chapmanb/followers","following_url":"https://api.github.com/users/chapmanb/following{/other_user}","gists_url":"https://api.github.com/users/chapmanb/gists{/gist_id}","starred_url":"https://api.github.com/users/chapmanb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/chapmanb/subscriptions","organizations_url":"https://api.github.com/users/chapmanb/orgs","repos_url":"https://api.github.com/users/chapmanb/repos","events_url":"https://api.github.com/users/chapmanb/events{/privacy}","received_events_url":"https://api.github.com/users/chapmanb/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":6,"created_at":"2016-06-22T09:26:27Z","updated_at":"2016-06-22T19:02:25Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/bioconda/bioconda-recipes/pulls/1805","html_url":"https://github.com/bioconda/bioconda-recipes/pull/1805","diff_url":"https://github.com/bioconda/bioconda-recipes/pull/1805.diff","patch_url":"https://github.com/bioconda/bioconda-recipes/pull/1805.patch"},"body":"* [X] I have read the guidelines above.\r\n* [ ] This PR adds a new recipe.\r\n* [X] This PR updates an existing recipe.\r\n* [ ] This PR does something else (explain below).\r\n\r\n- gatk: Fixes for gatk-register -- ensure we have full path to tar.bz2\r\n  input and allow use of non-versioned tarballs like nightlies with\r\n  --noversioncheck parameter. Fixes for gatk -- use the anaconda\r\n  installed java by default.\r\n- gvcf_regions: Fix bug with 0 based elements in Platypus gVCF output"},"comment":{"url":"https://api.github.com/repos/bioconda/bioconda-recipes/issues/comments/227844737","html_url":"https://github.com/bioconda/bioconda-recipes/pull/1805#issuecomment-227844737","issue_url":"https://api.github.com/repos/bioconda/bioconda-recipes/issues/1805","id":227844737,"user":{"login":"leobiscassi","id":1977418,"avatar_url":"https://avatars.githubusercontent.com/u/1977418?v=3","gravatar_id":"","url":"https://api.github.com/users/leobiscassi","html_url":"https://github.com/leobiscassi","followers_url":"https://api.github.com/users/leobiscassi/followers","following_url":"https://api.github.com/users/leobiscassi/following{/other_user}","gists_url":"https://api.github.com/users/leobiscassi/gists{/gist_id}","starred_url":"https://api.github.com/users/leobiscassi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/leobiscassi/subscriptions","organizations_url":"https://api.github.com/users/leobiscassi/orgs","repos_url":"https://api.github.com/users/leobiscassi/repos","events_url":"https://api.github.com/users/leobiscassi/events{/privacy}","received_events_url":"https://api.github.com/users/leobiscassi/received_events","type":"User","site_admin":false},"created_at":"2016-06-22T19:02:25Z","updated_at":"2016-06-22T19:02:25Z","body":"Hi everyone, I have troubles in [#PR1804](https://github.com/bioconda/bioconda-recipes/pull/1804) too."}}
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