{"action":"created","issue":{"url":"https://api.github.com/repos/gmarcais/Jellyfish/issues/60","repository_url":"https://api.github.com/repos/gmarcais/Jellyfish","labels_url":"https://api.github.com/repos/gmarcais/Jellyfish/issues/60/labels{/name}","comments_url":"https://api.github.com/repos/gmarcais/Jellyfish/issues/60/comments","events_url":"https://api.github.com/repos/gmarcais/Jellyfish/issues/60/events","html_url":"https://github.com/gmarcais/Jellyfish/issues/60","id":154352357,"number":60,"title":"Jellyfish python bindings don't support fasta or specify what format they do support","user":{"login":"MatthewRalston","id":4308024,"avatar_url":"https://avatars.githubusercontent.com/u/4308024?v=3","gravatar_id":"","url":"https://api.github.com/users/MatthewRalston","html_url":"https://github.com/MatthewRalston","followers_url":"https://api.github.com/users/MatthewRalston/followers","following_url":"https://api.github.com/users/MatthewRalston/following{/other_user}","gists_url":"https://api.github.com/users/MatthewRalston/gists{/gist_id}","starred_url":"https://api.github.com/users/MatthewRalston/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/MatthewRalston/subscriptions","organizations_url":"https://api.github.com/users/MatthewRalston/orgs","repos_url":"https://api.github.com/users/MatthewRalston/repos","events_url":"https://api.github.com/users/MatthewRalston/events{/privacy}","received_events_url":"https://api.github.com/users/MatthewRalston/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":2,"created_at":"2016-05-11T21:57:01Z","updated_at":"2016-05-30T15:01:31Z","closed_at":null,"body":"The RuntimeError doesn't make sense.\r\n```bash\r\n>cat test.txt\r\n>hello\r\nACTGACTGACT\r\n>python scripts/jellyfish_kmers.py --infile test.fa\r\nTraceback (most recent call last):\r\n  File \"scripts/jellyfish_kmers.py\", line 40, in <module>\r\n    main()\r\n  File \"scripts/jellyfish_kmers.py\", line 26, in main\r\n    mf = jellyfish.ReadMerFile(args.infile)\r\n  File \"swig/python/jellyfish.py\", line 231, in __init__\r\nRuntimeError: Unsupported format ''\r\n```"},"comment":{"url":"https://api.github.com/repos/gmarcais/Jellyfish/issues/comments/222510267","html_url":"https://github.com/gmarcais/Jellyfish/issues/60#issuecomment-222510267","issue_url":"https://api.github.com/repos/gmarcais/Jellyfish/issues/60","id":222510267,"user":{"login":"MatthewRalston","id":4308024,"avatar_url":"https://avatars.githubusercontent.com/u/4308024?v=3","gravatar_id":"","url":"https://api.github.com/users/MatthewRalston","html_url":"https://github.com/MatthewRalston","followers_url":"https://api.github.com/users/MatthewRalston/followers","following_url":"https://api.github.com/users/MatthewRalston/following{/other_user}","gists_url":"https://api.github.com/users/MatthewRalston/gists{/gist_id}","starred_url":"https://api.github.com/users/MatthewRalston/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/MatthewRalston/subscriptions","organizations_url":"https://api.github.com/users/MatthewRalston/orgs","repos_url":"https://api.github.com/users/MatthewRalston/repos","events_url":"https://api.github.com/users/MatthewRalston/events{/privacy}","received_events_url":"https://api.github.com/users/MatthewRalston/received_events","type":"User","site_admin":false},"created_at":"2016-05-30T15:01:31Z","updated_at":"2016-05-30T15:01:31Z","body":"Okay. I will close this issue. I didn't read that that was the requirement. Is there anyway to run the count function with the python bindings?"}}
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