{"action":"created","issue":{"url":"https://api.github.com/repos/geneontology/go-annotation/issues/1395","repository_url":"https://api.github.com/repos/geneontology/go-annotation","labels_url":"https://api.github.com/repos/geneontology/go-annotation/issues/1395/labels{/name}","comments_url":"https://api.github.com/repos/geneontology/go-annotation/issues/1395/comments","events_url":"https://api.github.com/repos/geneontology/go-annotation/issues/1395/events","html_url":"https://github.com/geneontology/go-annotation/issues/1395","id":154094517,"number":1395,"title":"Remove constraint on IEP only applying to BP","user":{"login":"cmungall","id":50745,"avatar_url":"https://avatars.githubusercontent.com/u/50745?v=3","gravatar_id":"","url":"https://api.github.com/users/cmungall","html_url":"https://github.com/cmungall","followers_url":"https://api.github.com/users/cmungall/followers","following_url":"https://api.github.com/users/cmungall/following{/other_user}","gists_url":"https://api.github.com/users/cmungall/gists{/gist_id}","starred_url":"https://api.github.com/users/cmungall/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cmungall/subscriptions","organizations_url":"https://api.github.com/users/cmungall/orgs","repos_url":"https://api.github.com/users/cmungall/repos","events_url":"https://api.github.com/users/cmungall/events{/privacy}","received_events_url":"https://api.github.com/users/cmungall/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/geneontology/go-annotation/labels/rule","name":"rule","color":"fef2c0"}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":12,"created_at":"2016-05-10T20:05:39Z","updated_at":"2016-08-10T18:26:13Z","closed_at":null,"body":"Consider an IEP annotation to 'cellular response to glucose stimulus'\r\n\r\nThis will yield an inference to locatization to 'cell'. We can argue about the utility of this, but it's logically and biologically correct, and we don't have 'cell' in our antislims.\r\n\r\nThere may be other cases where an IEP leads to inference of a subcellular location - currently prohibited.\r\n\r\n@tberardini and I propose removing the constraint that IEP only applies to BPs."},"comment":{"url":"https://api.github.com/repos/geneontology/go-annotation/issues/comments/238958345","html_url":"https://github.com/geneontology/go-annotation/issues/1395#issuecomment-238958345","issue_url":"https://api.github.com/repos/geneontology/go-annotation/issues/1395","id":238958345,"user":{"login":"cmungall","id":50745,"avatar_url":"https://avatars.githubusercontent.com/u/50745?v=3","gravatar_id":"","url":"https://api.github.com/users/cmungall","html_url":"https://github.com/cmungall","followers_url":"https://api.github.com/users/cmungall/followers","following_url":"https://api.github.com/users/cmungall/following{/other_user}","gists_url":"https://api.github.com/users/cmungall/gists{/gist_id}","starred_url":"https://api.github.com/users/cmungall/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cmungall/subscriptions","organizations_url":"https://api.github.com/users/cmungall/orgs","repos_url":"https://api.github.com/users/cmungall/repos","events_url":"https://api.github.com/users/cmungall/events{/privacy}","received_events_url":"https://api.github.com/users/cmungall/received_events","type":"User","site_admin":false},"created_at":"2016-08-10T18:26:13Z","updated_at":"2016-08-10T18:26:13Z","body":"This thread has too may things going on to make sense of.\r\n\r\nThese problems all go away if we add inter-ontology links (MF-part-of-BP, BP-occurs-in-CC) to go-basic and cease materializing inter-ontology inferences.\r\n\r\nI added a ticket for this: #1427\r\n\r\nIf we agree on this, then this ticket (#1395) becomes irrelevant, and we don't need to worry about the fact that GOC and GOA pipelines have diverged etc.\r\n \r\n"}}
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