{"action":"opened","issue":{"url":"https://api.github.com/repos/nathanweeks/exonerate/issues/10","repository_url":"https://api.github.com/repos/nathanweeks/exonerate","labels_url":"https://api.github.com/repos/nathanweeks/exonerate/issues/10/labels{/name}","comments_url":"https://api.github.com/repos/nathanweeks/exonerate/issues/10/comments","events_url":"https://api.github.com/repos/nathanweeks/exonerate/issues/10/events","html_url":"https://github.com/nathanweeks/exonerate/issues/10","id":183698078,"number":10,"title":"Compilation error","user":{"login":"francicco","id":9006870,"avatar_url":"https://avatars.githubusercontent.com/u/9006870?v=3","gravatar_id":"","url":"https://api.github.com/users/francicco","html_url":"https://github.com/francicco","followers_url":"https://api.github.com/users/francicco/followers","following_url":"https://api.github.com/users/francicco/following{/other_user}","gists_url":"https://api.github.com/users/francicco/gists{/gist_id}","starred_url":"https://api.github.com/users/francicco/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/francicco/subscriptions","organizations_url":"https://api.github.com/users/francicco/orgs","repos_url":"https://api.github.com/users/francicco/repos","events_url":"https://api.github.com/users/francicco/events{/privacy}","received_events_url":"https://api.github.com/users/francicco/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2016-10-18T14:11:57Z","updated_at":"2016-10-18T14:11:57Z","closed_at":null,"body":"I'm trying to compile Exonerate, but I got this error. I'm a bit lost.\r\n\r\n```\r\ngcc -DPACKAGE_NAME=\\\"\\\" -DPACKAGE_TARNAME=\\\"\\\" -DPACKAGE_VERSION=\\\"\\\" -DPACKAGE_STRING=\\\"\\\" -DPACKAGE_BUGREPORT=\\\"\\\" -DPACKAGE=\\\"exonerate\\\" -DVERSION=\\\"2.4.0\\\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_LIMITS_H=1 -DHAVE_ERRNO_H=1 -DHAVE_MATH_H=1 -DHAVE_STRINGS_H=1 -DHAVE_CTYPE_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_TIME_H=1 -DHAVE_UNISTD_H=1 -I. -I.  -DCUSTOM_GUINT64_FORMAT=\"\\\"lu\\\"\"    -g -O2 -I../..//scratch/c7701100/apps/glib-2.10.0 -I../..//scratch/c7701100/apps/glib-2.10.0/. -I../..//scratch/c7701100/apps/glib-2.10.0/./glib   -DG_DISABLE_ASSERT -O3 -finline-functions -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DUSE_PTHREADS -c fsm.test.c\r\nIn file included from fsm.test.c:17:\r\nfsm.h:24:37: error: glib.h: No such file or directory\r\nIn file included from fsm.h:25,\r\n                 from fsm.test.c:17:\r\nrecyclebin.h:30: error: expected specifier-qualifier-list before ‘gint’\r\nrecyclebin.h:40: error: expected ‘)’ before ‘*’ token\r\nrecyclebin.h:45: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘RecycleBin_memory_usage’\r\nrecyclebin.h:47: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘RecycleBin_alloc’\r\nrecyclebin.h:48: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘RecycleBin_alloc_blank’\r\nrecyclebin.h:49: error: expected declaration specifiers or ‘...’ before ‘gpointer’\r\nIn file included from fsm.test.c:17:\r\nfsm.h:33: error: expected specifier-qualifier-list before ‘gpointer’\r\nfsm.h:36: error: expected declaration specifiers or ‘...’ before ‘*’ token\r\nfsm.h:36: error: expected ‘)’ before ‘a’\r\nfsm.h:40: error: expected specifier-qualifier-list before ‘guchar’\r\nfsm.h:56: error: expected ‘)’ before ‘*’ token\r\nfsm.h:58: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘FSM_memory_usage’\r\nfsm.h:62: error: expected ‘)’ before ‘data’\r\nfsm.h:63: error: expected declaration specifiers or ‘...’ before ‘FSM_Destroy_Func’\r\nfsm.h:64: error: expected declaration specifiers or ‘...’ before ‘gpointer’\r\nfsm.h:66: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘FSM_add’\r\nfsm.h:69: error: expected ‘)’ before ‘seq_pos’\r\nfsm.h:73: error: expected declaration specifiers or ‘...’ before ‘gchar’\r\nfsm.h:73: error: expected declaration specifiers or ‘...’ before ‘FSM_Traverse_Func’\r\nfsm.h:74: error: expected declaration specifiers or ‘...’ before ‘gpointer’\r\nfsm.h:76: error: expected declaration specifiers or ‘...’ before ‘guchar’\r\nfsm.h:77: error: expected declaration specifiers or ‘...’ before ‘guchar’\r\nfsm.test.c:19: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘test_merge_Func’\r\nfsm.test.c:28: error: expected ‘)’ before ‘seq_pos’\r\nfsm.test.c: In function ‘main’:\r\nfsm.test.c:38: error: ‘gint’ undeclared (first use in this function)\r\nfsm.test.c:38: error: (Each undeclared identifier is reported only once\r\nfsm.test.c:38: error: for each function it appears in.)\r\nfsm.test.c:38: error: expected ‘;’ before ‘count’\r\nfsm.test.c:40: error: ‘test_merge_Func’ undeclared (first use in this function)\r\nfsm.test.c:53: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘i’\r\nfsm.test.c:53: error: ‘i’ undeclared (first use in this function)\r\nfsm.test.c:54: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘*’ token\r\nfsm.test.c:54: error: ‘tolower_filter’ undeclared (first use in this function)\r\nfsm.test.c:54: error: ‘guchar’ undeclared (first use in this function)\r\nfsm.test.c:54: error: expected expression before ‘)’ token\r\nfsm.test.c:62: error: too many arguments to function ‘FSM_add_traversal_filter’\r\nfsm.test.c:63: error: ‘test_traverse_Func’ undeclared (first use in this function)\r\nfsm.test.c:63: error: ‘count’ undeclared (first use in this function)\r\nfsm.test.c:63: error: too many arguments to function ‘FSM_traverse’\r\nmake[2]: *** [fsm.test.o] Error 1\r\nmake[2]: Leaving directory `/gpfs/scratch/c7701100/apps/exonerate/src/struct'\r\nmake[1]: *** [install-recursive] Error 1\r\nmake[1]: Leaving directory `/gpfs/scratch/c7701100/apps/exonerate/src'\r\nmake: *** [install-recursive] Error 1\r\n```\r\n\r\nThank you\r\nF"}}
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