{"action":"created","issue":{"url":"https://api.github.com/repos/xflouris/PEAR/issues/32","repository_url":"https://api.github.com/repos/xflouris/PEAR","labels_url":"https://api.github.com/repos/xflouris/PEAR/issues/32/labels{/name}","comments_url":"https://api.github.com/repos/xflouris/PEAR/issues/32/comments","events_url":"https://api.github.com/repos/xflouris/PEAR/issues/32/events","html_url":"https://github.com/xflouris/PEAR/issues/32","id":142940344,"number":32,"title":"unassembled reverse reads file","user":{"login":"sghignone","id":7242651,"avatar_url":"https://avatars.githubusercontent.com/u/7242651?v=3","gravatar_id":"","url":"https://api.github.com/users/sghignone","html_url":"https://github.com/sghignone","followers_url":"https://api.github.com/users/sghignone/followers","following_url":"https://api.github.com/users/sghignone/following{/other_user}","gists_url":"https://api.github.com/users/sghignone/gists{/gist_id}","starred_url":"https://api.github.com/users/sghignone/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/sghignone/subscriptions","organizations_url":"https://api.github.com/users/sghignone/orgs","repos_url":"https://api.github.com/users/sghignone/repos","events_url":"https://api.github.com/users/sghignone/events{/privacy}","received_events_url":"https://api.github.com/users/sghignone/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/xflouris/PEAR/labels/enhancement","name":"enhancement","color":"84b6eb"}],"state":"open","locked":false,"assignee":{"login":"xflouris","id":1271529,"avatar_url":"https://avatars.githubusercontent.com/u/1271529?v=3","gravatar_id":"","url":"https://api.github.com/users/xflouris","html_url":"https://github.com/xflouris","followers_url":"https://api.github.com/users/xflouris/followers","following_url":"https://api.github.com/users/xflouris/following{/other_user}","gists_url":"https://api.github.com/users/xflouris/gists{/gist_id}","starred_url":"https://api.github.com/users/xflouris/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/xflouris/subscriptions","organizations_url":"https://api.github.com/users/xflouris/orgs","repos_url":"https://api.github.com/users/xflouris/repos","events_url":"https://api.github.com/users/xflouris/events{/privacy}","received_events_url":"https://api.github.com/users/xflouris/received_events","type":"User","site_admin":false},"milestone":null,"comments":2,"created_at":"2016-03-23T11:52:50Z","updated_at":"2016-03-24T08:45:27Z","closed_at":null,"body":"Hello, \r\nthis is actually not an issue, but simply a question regarding the output file.\r\nThe sequences in:\r\n`output_prefix.unassembled.reverse.fastq - unassembled reverse reads`\r\nhave  been reversed and complemented?\r\nIt might be useful to add an option for leaving them in original direction.\r\nThanks\r\ns."},"comment":{"url":"https://api.github.com/repos/xflouris/PEAR/issues/comments/200738174","html_url":"https://github.com/xflouris/PEAR/issues/32#issuecomment-200738174","issue_url":"https://api.github.com/repos/xflouris/PEAR/issues/32","id":200738174,"user":{"login":"xflouris","id":1271529,"avatar_url":"https://avatars.githubusercontent.com/u/1271529?v=3","gravatar_id":"","url":"https://api.github.com/users/xflouris","html_url":"https://github.com/xflouris","followers_url":"https://api.github.com/users/xflouris/followers","following_url":"https://api.github.com/users/xflouris/following{/other_user}","gists_url":"https://api.github.com/users/xflouris/gists{/gist_id}","starred_url":"https://api.github.com/users/xflouris/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/xflouris/subscriptions","organizations_url":"https://api.github.com/users/xflouris/orgs","repos_url":"https://api.github.com/users/xflouris/repos","events_url":"https://api.github.com/users/xflouris/events{/privacy}","received_events_url":"https://api.github.com/users/xflouris/received_events","type":"User","site_admin":false},"created_at":"2016-03-24T08:45:27Z","updated_at":"2016-03-24T08:45:27Z","body":"thanks for the suggestion. \r\n\r\nFor now, as Jimmy O'Donnell suggested in the mailing list you can use [seqtk](https://github.com/lh3/seqtk) for reversing the reads. But I will add an option for keeping the original direction.\r\n"}}