{"action":"created","issue":{"url":"https://api.github.com/repos/jtleek/sva-devel/issues/13","repository_url":"https://api.github.com/repos/jtleek/sva-devel","labels_url":"https://api.github.com/repos/jtleek/sva-devel/issues/13/labels{/name}","comments_url":"https://api.github.com/repos/jtleek/sva-devel/issues/13/comments","events_url":"https://api.github.com/repos/jtleek/sva-devel/issues/13/events","html_url":"https://github.com/jtleek/sva-devel/pull/13","id":157336147,"number":13,"title":"Added check for rows in input dat with no variance","user":{"login":"khughitt","id":125001,"avatar_url":"https://avatars.githubusercontent.com/u/125001?v=3","gravatar_id":"","url":"https://api.github.com/users/khughitt","html_url":"https://github.com/khughitt","followers_url":"https://api.github.com/users/khughitt/followers","following_url":"https://api.github.com/users/khughitt/following{/other_user}","gists_url":"https://api.github.com/users/khughitt/gists{/gist_id}","starred_url":"https://api.github.com/users/khughitt/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/khughitt/subscriptions","organizations_url":"https://api.github.com/users/khughitt/orgs","repos_url":"https://api.github.com/users/khughitt/repos","events_url":"https://api.github.com/users/khughitt/events{/privacy}","received_events_url":"https://api.github.com/users/khughitt/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":3,"created_at":"2016-05-28T12:19:23Z","updated_at":"2016-05-28T19:59:03Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/jtleek/sva-devel/pulls/13","html_url":"https://github.com/jtleek/sva-devel/pull/13","diff_url":"https://github.com/jtleek/sva-devel/pull/13.diff","patch_url":"https://github.com/jtleek/sva-devel/pull/13.patch"},"body":"Currently ComBat fails when the input data matrix contains rows with no variance. There is likely a better solution for dealing with this, but for now at least, stopping execution with an informative error message may be useful."},"comment":{"url":"https://api.github.com/repos/jtleek/sva-devel/issues/comments/222326951","html_url":"https://github.com/jtleek/sva-devel/pull/13#issuecomment-222326951","issue_url":"https://api.github.com/repos/jtleek/sva-devel/issues/13","id":222326951,"user":{"login":"khughitt","id":125001,"avatar_url":"https://avatars.githubusercontent.com/u/125001?v=3","gravatar_id":"","url":"https://api.github.com/users/khughitt","html_url":"https://github.com/khughitt","followers_url":"https://api.github.com/users/khughitt/followers","following_url":"https://api.github.com/users/khughitt/following{/other_user}","gists_url":"https://api.github.com/users/khughitt/gists{/gist_id}","starred_url":"https://api.github.com/users/khughitt/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/khughitt/subscriptions","organizations_url":"https://api.github.com/users/khughitt/orgs","repos_url":"https://api.github.com/users/khughitt/repos","events_url":"https://api.github.com/users/khughitt/events{/privacy}","received_events_url":"https://api.github.com/users/khughitt/received_events","type":"User","site_admin":false},"created_at":"2016-05-28T19:59:03Z","updated_at":"2016-05-28T19:59:03Z","body":"Updated PR per your suggestion. It doesn't attempt to deal with within-batch uniformity, but will at least leave out genes with no variance across all samples during batch adjustment."}}
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