{"action":"closed","issue":{"url":"https://api.github.com/repos/Linuxbrew/homebrew-dupes/issues/54","repository_url":"https://api.github.com/repos/Linuxbrew/homebrew-dupes","labels_url":"https://api.github.com/repos/Linuxbrew/homebrew-dupes/issues/54/labels{/name}","comments_url":"https://api.github.com/repos/Linuxbrew/homebrew-dupes/issues/54/comments","events_url":"https://api.github.com/repos/Linuxbrew/homebrew-dupes/issues/54/events","html_url":"https://github.com/Linuxbrew/homebrew-dupes/issues/54","id":167231266,"number":54,"title":"lapack installation fails: cmake: error while loading shared libraries: libbz2.so.1.0","user":{"login":"Horta","id":514522,"avatar_url":"https://avatars.githubusercontent.com/u/514522?v=3","gravatar_id":"","url":"https://api.github.com/users/Horta","html_url":"https://github.com/Horta","followers_url":"https://api.github.com/users/Horta/followers","following_url":"https://api.github.com/users/Horta/following{/other_user}","gists_url":"https://api.github.com/users/Horta/gists{/gist_id}","starred_url":"https://api.github.com/users/Horta/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Horta/subscriptions","organizations_url":"https://api.github.com/users/Horta/orgs","repos_url":"https://api.github.com/users/Horta/repos","events_url":"https://api.github.com/users/Horta/events{/privacy}","received_events_url":"https://api.github.com/users/Horta/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2016-07-24T12:26:52Z","updated_at":"2016-07-24T12:54:28Z","closed_at":"2016-07-24T12:54:27Z","body":"```\r\n$ brew install lapack -s\r\n==> Installing lapack from homebrew/dupes\r\n==> Installing dependencies for homebrew/dupes/lapack: sphinx-doc, pkg-config, makedepend, openssl, curl, libidn, cmake\r\n==> Installing homebrew/dupes/lapack dependency: sphinx-doc\r\n==> Downloading https://linuxbrew.bintray.com/bottles/sphinx-doc-1.4.1.x86_64_linux.bottle.tar.gz\r\n######################################################################## 100.0%\r\n==> Pouring sphinx-doc-1.4.1.x86_64_linux.bottle.tar.gz\r\n==> Caveats\r\nThis formula is keg-only, which means it was not symlinked into /nfs/software/stegle/syst3m/linuxbrew.\r\n\r\nThis formula is mainly used internally by other formulae.\r\nUsers are advised to use `pip` to install sphinx-doc.\r\n\r\n==> Summary\r\n🍺  /nfs/software/stegle/syst3m/linuxbrew/Cellar/sphinx-doc/1.4.1: 2,237 files, 32.2M\r\n==> Installing homebrew/dupes/lapack dependency: pkg-config\r\n==> Downloading https://pkgconfig.freedesktop.org/releases/pkg-config-0.29.1.tar.gz\r\nAlready downloaded: /homes/horta/.cache/Homebrew/pkg-config-0.29.1.tar.gz\r\n==> ./configure --prefix=/nfs/software/stegle/syst3m/linuxbrew/Cellar/pkg-config/0.29.1_1 --disable-host-tool --with-internal-glib --with-pc-path=/nfs/software/stegle/syst3m/linuxb\r\n==> make\r\n==> make check\r\n==> make install\r\n🍺  /nfs/software/stegle/syst3m/linuxbrew/Cellar/pkg-config/0.29.1_1: 10 files, 664.4K, built in 17 seconds\r\n==> Installing homebrew/dupes/lapack dependency: makedepend\r\n==> Downloading https://linuxbrew.bintray.com/bottles/makedepend-1.0.5.x86_64_linux.bottle.1.tar.gz\r\nAlready downloaded: /homes/horta/.cache/Homebrew/makedepend-1.0.5.x86_64_linux.bottle.1.tar.gz\r\n==> Pouring makedepend-1.0.5.x86_64_linux.bottle.1.tar.gz\r\n🍺  /nfs/software/stegle/syst3m/linuxbrew/Cellar/makedepend/1.0.5: 7 files, 92.3K\r\n==> Installing homebrew/dupes/lapack dependency: openssl\r\n==> Downloading https://www.openssl.org/source/openssl-1.0.2h.tar.gz\r\nAlready downloaded: /homes/horta/.cache/Homebrew/openssl-1.0.2h.tar.gz\r\n==> perl ./Configure --prefix=/nfs/software/stegle/syst3m/linuxbrew/Cellar/openssl/1.0.2h_1 --openssldir=/nfs/software/stegle/syst3m/linuxbrew/etc/openssl no-ssl2 zlib-dynamic shar\r\n==> make depend\r\n==> make\r\n==> make test\r\n==> make install MANDIR=/nfs/software/stegle/syst3m/linuxbrew/Cellar/openssl/1.0.2h_1/share/man MANSUFFIX=ssl\r\n==> Downloading https://curl.haxx.se/ca/cacert-2016-04-20.pem\r\nAlready downloaded: /homes/horta/.cache/Homebrew/openssl--cacert-2016-04.pem\r\n==> Caveats\r\nA CA file has been bootstrapped using certificates from the system\r\nkeychain. To add additional certificates, place .pem files in\r\n  /nfs/software/stegle/syst3m/linuxbrew/etc/openssl/certs\r\n\r\nand run\r\n  /nfs/software/stegle/syst3m/linuxbrew/opt/openssl/bin/c_rehash\r\n\r\n==> Summary\r\n🍺  /nfs/software/stegle/syst3m/linuxbrew/Cellar/openssl/1.0.2h_1: 1,698 files, 14.4M, built in 2 minutes 40 seconds\r\n==> Installing homebrew/dupes/lapack dependency: curl\r\n==> Downloading https://curl.haxx.se/download/curl-7.49.1.tar.bz2\r\nAlready downloaded: /homes/horta/.cache/Homebrew/curl-7.49.1.tar.bz2\r\n==> ./configure --disable-silent-rules --prefix=/nfs/software/stegle/syst3m/linuxbrew/Cellar/curl/7.49.1 --with-ssl=/nfs/software/stegle/syst3m/linuxbrew/opt/openssl --with-ca-bund\r\n==> make install\r\n🍺  /nfs/software/stegle/syst3m/linuxbrew/Cellar/curl/7.49.1: 366 files, 2.8M, built in 23 seconds\r\n==> Installing homebrew/dupes/lapack dependency: libidn\r\n==> Downloading https://linuxbrew.bintray.com/bottles/libidn-1.32.x86_64_linux.bottle.tar.gz\r\nAlready downloaded: /homes/horta/.cache/Homebrew/libidn-1.32.x86_64_linux.bottle.tar.gz\r\n==> Pouring libidn-1.32.x86_64_linux.bottle.tar.gz\r\n==> Caveats\r\n\r\nEmacs Lisp files have been installed to:\r\n  /nfs/software/stegle/syst3m/linuxbrew/share/emacs/site-lisp/libidn\r\n==> Summary\r\n🍺  /nfs/software/stegle/syst3m/linuxbrew/Cellar/libidn/1.32: 93 files, 1.7M\r\n==> Installing homebrew/dupes/lapack dependency: cmake\r\n==> Downloading https://linuxbrew.bintray.com/bottles/cmake-3.6.0.x86_64_linux.bottle.tar.gz\r\nAlready downloaded: /homes/horta/.cache/Homebrew/cmake-3.6.0.x86_64_linux.bottle.tar.gz\r\n==> Pouring cmake-3.6.0.x86_64_linux.bottle.tar.gz\r\n==> Caveats\r\n\r\nEmacs Lisp files have been installed to:\r\n  /nfs/software/stegle/syst3m/linuxbrew/share/emacs/site-lisp/cmake\r\n==> Summary\r\n🍺  /nfs/software/stegle/syst3m/linuxbrew/Cellar/cmake/3.6.0: 2,026 files, 23.8M\r\n==> Installing homebrew/dupes/lapack\r\n==> Using a fortran compiler found at /usr/bin/gfortran.\r\nThis may be changed by setting the FC environment variable.\r\n==> Downloading http://www.netlib.org/lapack/lapack-3.6.0.tgz\r\nAlready downloaded: /homes/horta/.cache/Homebrew/lapack-3.6.0.tgz\r\n==> cmake . -DBUILD_SHARED_LIBS:BOOL=ON -DLAPACKE:BOOL=ON -DCMAKE_C_FLAGS_RELEASE=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE=-DNDEBUG -DCMAKE_INSTALL_PREFIX=/nfs/software/stegle/syst3m/lin\r\nLast 15 lines from /homes/horta/.cache/Homebrew/Logs/lapack/01.cmake:\r\ncmake\r\n.\r\n-DBUILD_SHARED_LIBS:BOOL=ON\r\n-DLAPACKE:BOOL=ON\r\n-DCMAKE_C_FLAGS_RELEASE=-DNDEBUG\r\n-DCMAKE_CXX_FLAGS_RELEASE=-DNDEBUG\r\n-DCMAKE_INSTALL_PREFIX=/nfs/software/stegle/syst3m/linuxbrew/Cellar/lapack/3.6.0\r\n-DCMAKE_BUILD_TYPE=Release\r\n-DCMAKE_FIND_FRAMEWORK=LAST\r\n-DCMAKE_VERBOSE_MAKEFILE=ON\r\n-Wno-dev\r\n-DCMAKE_BUILD_WITH_INSTALL_RPATH=1\r\n-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=1\r\n\r\ncmake: error while loading shared libraries: libbz2.so.1.0: cannot open shared object file: No such file or directory\r\n\r\nREAD THIS: https://github.com/Linuxbrew/brew/blob/master/share/doc/homebrew/Troubleshooting.md#troubleshooting\r\nIf reporting this issue please do so at (not Homebrew/brew):\r\n  https://github.com/Linuxbrew/homebrew-dupes/issues\r\n\r\nThese open issues may also help:\r\nLapack... tailoring make https://github.com/Homebrew/homebrew-dupes/issues/579\r\n```\r\n\r\n\r\nhttps://gist.github.com/ecdd22b87c84c88499eb9a42ae8398a3"}}
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