{"action":"created","issue":{"url":"https://api.github.com/repos/dilawar/roi_locator/issues/1","labels_url":"https://api.github.com/repos/dilawar/roi_locator/issues/1/labels{/name}","comments_url":"https://api.github.com/repos/dilawar/roi_locator/issues/1/comments","events_url":"https://api.github.com/repos/dilawar/roi_locator/issues/1/events","html_url":"https://github.com/dilawar/roi_locator/issues/1","id":128521381,"number":1,"title":"Required changes to df_by_f","user":{"login":"soumyaaymous","id":14876495,"avatar_url":"https://avatars.githubusercontent.com/u/14876495?v=3","gravatar_id":"","url":"https://api.github.com/users/soumyaaymous","html_url":"https://github.com/soumyaaymous","followers_url":"https://api.github.com/users/soumyaaymous/followers","following_url":"https://api.github.com/users/soumyaaymous/following{/other_user}","gists_url":"https://api.github.com/users/soumyaaymous/gists{/gist_id}","starred_url":"https://api.github.com/users/soumyaaymous/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/soumyaaymous/subscriptions","organizations_url":"https://api.github.com/users/soumyaaymous/orgs","repos_url":"https://api.github.com/users/soumyaaymous/repos","events_url":"https://api.github.com/users/soumyaaymous/events{/privacy}","received_events_url":"https://api.github.com/users/soumyaaymous/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":4,"created_at":"2016-01-25T11:57:53Z","updated_at":"2016-01-26T05:36:58Z","closed_at":null,"body":"- [x] baseline of each roi should be the avg value of the first 5 frames of that roi\r\n- [ ] Perform trial averaged traces (of all the videos in that directory)\r\n- [ ] Clean up y axis(currently its difficult to read)\r\n- [ ] X-axis: should ask for trial duration and number of frames and calculate frame rate. X axis should display time in milliseconds (500ms, 1000ms, 1500ms etc)\r\n- [x] Scalebar on the side\r\n\r\n6. Ask for CS- trials and plot it seperately (same as CS+, should plot trial averages). Should have a provision for 'No CS-'\r\n\r\n\r\nOn a Seperate Code:\r\nFilter: Seperate code with filter\r\nShows spikes and lows (inhibition). Above +2 and Below -0.5 std dev respectively. \r\n"},"comment":{"url":"https://api.github.com/repos/dilawar/roi_locator/issues/comments/174841560","html_url":"https://github.com/dilawar/roi_locator/issues/1#issuecomment-174841560","issue_url":"https://api.github.com/repos/dilawar/roi_locator/issues/1","id":174841560,"user":{"login":"dilawar","id":895681,"avatar_url":"https://avatars.githubusercontent.com/u/895681?v=3","gravatar_id":"","url":"https://api.github.com/users/dilawar","html_url":"https://github.com/dilawar","followers_url":"https://api.github.com/users/dilawar/followers","following_url":"https://api.github.com/users/dilawar/following{/other_user}","gists_url":"https://api.github.com/users/dilawar/gists{/gist_id}","starred_url":"https://api.github.com/users/dilawar/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dilawar/subscriptions","organizations_url":"https://api.github.com/users/dilawar/orgs","repos_url":"https://api.github.com/users/dilawar/repos","events_url":"https://api.github.com/users/dilawar/events{/privacy}","received_events_url":"https://api.github.com/users/dilawar/received_events","type":"User","site_admin":false},"created_at":"2016-01-26T05:36:58Z","updated_at":"2016-01-26T05:36:58Z","body":"I'll change the hotline. \nI am not sure how you'd like to have the trial average. You want one plot for\neach video or all frames should be appended? Or for each roi, I take the average\nof recordings (from the directory)?\n\n-- \nbest,\n    Dilawar\nOn Mon, Jan 25, 2016 at 07:32:11AM -0800, soumyaaymous wrote:\n>Dear Dilawar.\n>Thanks for implementing this baseline. Also, in the hot scale, does white\n>represent high activity? I think the reverse is better as the dark colour\n>would be easier to see.\n>Also, please see if you can implement the trace averaged  plotting. That is\n>at the heart of what i am trying to see.\n>\n>Thanks and best regards\n>\n>Soumya Bhattacharjee\n>PhD Scholar and Graduate Student\n>Bhalla Lab\n>The National Centre for Biological Sciences\n>UAS, GKVK\n>Bellary Road\n>Bangalore 560065\n>Karnataka\n>\n>On Mon, Jan 25, 2016 at 7:16 PM, Dilawar Singh <notifications@github.com>\n>wrote:\n>\n>> [image: trial3-roi-1 tif_dfbyf dat_df_by_f]\n>> <https://cloud.githubusercontent.com/assets/895681/12552481/0c735948-c398-11e5-9e8d-8d3b74af0623.png>\n>>\n>> —\n>> Reply to this email directly or view it on GitHub\n>> <https://github.com/dilawar/roi_locator/issues/1#issuecomment-174513505>.\n>>\n>\n>\n>---\n>Reply to this email directly or view it on GitHub:\n>https://github.com/dilawar/roi_locator/issues/1#issuecomment-174544700\n"}}