{"action":"created","issue":{"url":"https://api.github.com/repos/workflow4metabolomics/xcms/issues/10","repository_url":"https://api.github.com/repos/workflow4metabolomics/xcms","labels_url":"https://api.github.com/repos/workflow4metabolomics/xcms/issues/10/labels{/name}","comments_url":"https://api.github.com/repos/workflow4metabolomics/xcms/issues/10/comments","events_url":"https://api.github.com/repos/workflow4metabolomics/xcms/issues/10/events","html_url":"https://github.com/workflow4metabolomics/xcms/issues/10","id":149279654,"number":10,"title":"Travis test too long","user":{"login":"lecorguille","id":11072022,"avatar_url":"https://avatars.githubusercontent.com/u/11072022?v=3","gravatar_id":"","url":"https://api.github.com/users/lecorguille","html_url":"https://github.com/lecorguille","followers_url":"https://api.github.com/users/lecorguille/followers","following_url":"https://api.github.com/users/lecorguille/following{/other_user}","gists_url":"https://api.github.com/users/lecorguille/gists{/gist_id}","starred_url":"https://api.github.com/users/lecorguille/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/lecorguille/subscriptions","organizations_url":"https://api.github.com/users/lecorguille/orgs","repos_url":"https://api.github.com/users/lecorguille/repos","events_url":"https://api.github.com/users/lecorguille/events{/privacy}","received_events_url":"https://api.github.com/users/lecorguille/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/workflow4metabolomics/xcms/labels/Quality","name":"Quality","color":"0052cc"}],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":1,"created_at":"2016-04-18T21:38:07Z","updated_at":"2016-04-19T06:25:29Z","closed_at":null,"body":"I'm currently setting travis test for our tools. I need to run all the tests within 50 minutes and if a test don't produce log alter 10 min, it fails.\r\n\r\nhttps://travis-ci.org/workflow4metabolomics/xcms/builds/124014197\r\n```\r\nNo output has been received in the last 10m0s, this potentially indicates a stalled build or something wrong with the build itself.\r\n\r\nThe build has been terminated\r\n```\r\n\r\nIt seems that the group jobs builded from my test cases are too long for TravisCI.\r\n\r\nhttps://github.com/workflow4metabolomics/xcms/blob/master/galaxy/xcms_group/abims_xcms_group.xml#L100\r\n\r\n@yguitton @sneumann or anyone else, do you know which method and/or parameters I can set to reduce executing time?\r\n\r\nOr do I have too change my input dataset?\r\n\r\nThanks by advance\r\n"},"comment":{"url":"https://api.github.com/repos/workflow4metabolomics/xcms/issues/comments/211754424","html_url":"https://github.com/workflow4metabolomics/xcms/issues/10#issuecomment-211754424","issue_url":"https://api.github.com/repos/workflow4metabolomics/xcms/issues/10","id":211754424,"user":{"login":"sneumann","id":195385,"avatar_url":"https://avatars.githubusercontent.com/u/195385?v=3","gravatar_id":"","url":"https://api.github.com/users/sneumann","html_url":"https://github.com/sneumann","followers_url":"https://api.github.com/users/sneumann/followers","following_url":"https://api.github.com/users/sneumann/following{/other_user}","gists_url":"https://api.github.com/users/sneumann/gists{/gist_id}","starred_url":"https://api.github.com/users/sneumann/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/sneumann/subscriptions","organizations_url":"https://api.github.com/users/sneumann/orgs","repos_url":"https://api.github.com/users/sneumann/repos","events_url":"https://api.github.com/users/sneumann/events{/privacy}","received_events_url":"https://api.github.com/users/sneumann/received_events","type":"User","site_admin":false},"created_at":"2016-04-19T06:25:29Z","updated_at":"2016-04-19T06:25:29Z","body":"Hi, you have a pretty large number of peaks per sample, are there memory/swapping issues on the travis host ? Also, you might increase minfrac, to avoid getting 48998 groups. That would result in \r\ntoo many NA values anyway. Just my 2c. Yours, Steffen\r\n"}}