{"action":"closed","issue":{"url":"https://api.github.com/repos/joey711/phyloseq/issues/652","repository_url":"https://api.github.com/repos/joey711/phyloseq","labels_url":"https://api.github.com/repos/joey711/phyloseq/issues/652/labels{/name}","comments_url":"https://api.github.com/repos/joey711/phyloseq/issues/652/comments","events_url":"https://api.github.com/repos/joey711/phyloseq/issues/652/events","html_url":"https://github.com/joey711/phyloseq/issues/652","id":170239698,"number":652,"title":"How to remove OTUs by name","user":{"login":"lfaller","id":7854149,"avatar_url":"https://avatars.githubusercontent.com/u/7854149?v=3","gravatar_id":"","url":"https://api.github.com/users/lfaller","html_url":"https://github.com/lfaller","followers_url":"https://api.github.com/users/lfaller/followers","following_url":"https://api.github.com/users/lfaller/following{/other_user}","gists_url":"https://api.github.com/users/lfaller/gists{/gist_id}","starred_url":"https://api.github.com/users/lfaller/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/lfaller/subscriptions","organizations_url":"https://api.github.com/users/lfaller/orgs","repos_url":"https://api.github.com/users/lfaller/repos","events_url":"https://api.github.com/users/lfaller/events{/privacy}","received_events_url":"https://api.github.com/users/lfaller/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":2,"created_at":"2016-08-09T18:39:15Z","updated_at":"2016-08-26T17:33:32Z","closed_at":"2016-08-26T17:33:32Z","body":"Hi all,\r\n\r\nI have a list of OTUs that I want to remove from my phyloseq dataset.\r\n\r\nI can access my OTU table using `otu_table(physeq_object)` and remove OTUs that way, but is there a better way to do this, so that the entire phyloseq object gets updated?\r\n\r\nThanks for any suggestions!\r\n~Lina"}}
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