{"action":"created","issue":{"url":"https://api.github.com/repos/MRtrix3/mrtrix3/issues/679","repository_url":"https://api.github.com/repos/MRtrix3/mrtrix3","labels_url":"https://api.github.com/repos/MRtrix3/mrtrix3/issues/679/labels{/name}","comments_url":"https://api.github.com/repos/MRtrix3/mrtrix3/issues/679/comments","events_url":"https://api.github.com/repos/MRtrix3/mrtrix3/issues/679/events","html_url":"https://github.com/MRtrix3/mrtrix3/pull/679","id":161490468,"number":679,"title":"Updates to installation instructions","user":{"login":"jdtournier","id":3221000,"avatar_url":"https://avatars.githubusercontent.com/u/3221000?v=3","gravatar_id":"","url":"https://api.github.com/users/jdtournier","html_url":"https://github.com/jdtournier","followers_url":"https://api.github.com/users/jdtournier/followers","following_url":"https://api.github.com/users/jdtournier/following{/other_user}","gists_url":"https://api.github.com/users/jdtournier/gists{/gist_id}","starred_url":"https://api.github.com/users/jdtournier/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jdtournier/subscriptions","organizations_url":"https://api.github.com/users/jdtournier/orgs","repos_url":"https://api.github.com/users/jdtournier/repos","events_url":"https://api.github.com/users/jdtournier/events{/privacy}","received_events_url":"https://api.github.com/users/jdtournier/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/MRtrix3/mrtrix3/labels/documentation","name":"documentation","color":"c2e0c6"},{"url":"https://api.github.com/repos/MRtrix3/mrtrix3/labels/enhancement","name":"enhancement","color":"84b6eb"}],"state":"open","locked":false,"assignee":{"login":"jdtournier","id":3221000,"avatar_url":"https://avatars.githubusercontent.com/u/3221000?v=3","gravatar_id":"","url":"https://api.github.com/users/jdtournier","html_url":"https://github.com/jdtournier","followers_url":"https://api.github.com/users/jdtournier/followers","following_url":"https://api.github.com/users/jdtournier/following{/other_user}","gists_url":"https://api.github.com/users/jdtournier/gists{/gist_id}","starred_url":"https://api.github.com/users/jdtournier/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jdtournier/subscriptions","organizations_url":"https://api.github.com/users/jdtournier/orgs","repos_url":"https://api.github.com/users/jdtournier/repos","events_url":"https://api.github.com/users/jdtournier/events{/privacy}","received_events_url":"https://api.github.com/users/jdtournier/received_events","type":"User","site_admin":false},"assignees":[{"login":"jdtournier","id":3221000,"avatar_url":"https://avatars.githubusercontent.com/u/3221000?v=3","gravatar_id":"","url":"https://api.github.com/users/jdtournier","html_url":"https://github.com/jdtournier","followers_url":"https://api.github.com/users/jdtournier/followers","following_url":"https://api.github.com/users/jdtournier/following{/other_user}","gists_url":"https://api.github.com/users/jdtournier/gists{/gist_id}","starred_url":"https://api.github.com/users/jdtournier/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jdtournier/subscriptions","organizations_url":"https://api.github.com/users/jdtournier/orgs","repos_url":"https://api.github.com/users/jdtournier/repos","events_url":"https://api.github.com/users/jdtournier/events{/privacy}","received_events_url":"https://api.github.com/users/jdtournier/received_events","type":"User","site_admin":false}],"milestone":null,"comments":22,"created_at":"2016-06-21T17:06:27Z","updated_at":"2016-07-26T07:49:04Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/MRtrix3/mrtrix3/pulls/679","html_url":"https://github.com/MRtrix3/mrtrix3/pull/679","diff_url":"https://github.com/MRtrix3/mrtrix3/pull/679.diff","patch_url":"https://github.com/MRtrix3/mrtrix3/pull/679.patch"},"body":"A couple of changes based on recent experience:\r\n\r\n- update the `PATH` update command to deal with spaces in folder names - often a problem especially on Windows\r\n\r\n- add a warning about issuing the `PATH` update command repeatedly, and suggest the use of an editor to modify - or at least delete the offending line before issuing the command again...\r\n\r\nThoughts / amendments welcome..."},"comment":{"url":"https://api.github.com/repos/MRtrix3/mrtrix3/issues/comments/235188578","html_url":"https://github.com/MRtrix3/mrtrix3/pull/679#issuecomment-235188578","issue_url":"https://api.github.com/repos/MRtrix3/mrtrix3/issues/679","id":235188578,"user":{"login":"jdtournier","id":3221000,"avatar_url":"https://avatars.githubusercontent.com/u/3221000?v=3","gravatar_id":"","url":"https://api.github.com/users/jdtournier","html_url":"https://github.com/jdtournier","followers_url":"https://api.github.com/users/jdtournier/followers","following_url":"https://api.github.com/users/jdtournier/following{/other_user}","gists_url":"https://api.github.com/users/jdtournier/gists{/gist_id}","starred_url":"https://api.github.com/users/jdtournier/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jdtournier/subscriptions","organizations_url":"https://api.github.com/users/jdtournier/orgs","repos_url":"https://api.github.com/users/jdtournier/repos","events_url":"https://api.github.com/users/jdtournier/events{/privacy}","received_events_url":"https://api.github.com/users/jdtournier/received_events","type":"User","site_admin":false},"created_at":"2016-07-26T07:49:04Z","updated_at":"2016-07-26T07:49:04Z","body":"Agree things are a bit of a mess in MSYS2 right now. On the python issue: the version shipped by MinGW doesn't work. First off, it doesn't provide `python` as such, just `python3`, so invoking `./configure` doesn't work out of the box. That's really resolved by invoking `python3 configure`, but that's not the real issue. The bigger problem is that for some mysterious reason, trying to get the Eigen3 flags by invoking `pkg-config --cflags eigen3` (via subprocess) fails with Python 3.5 as shipped by MinGW, while it works fine with version 3.4 as shipped by the MSYS2 `python` package. I can't figure out why, the relevant environment variables are set correctly in the subprocess, as far as I can tell from limited testing, and the command works just fine when copy/pasted into the terminal. Go figure..."}}
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