{"action":"closed","issue":{"url":"https://api.github.com/repos/RamsinghLab/arkas/issues/7","repository_url":"https://api.github.com/repos/RamsinghLab/arkas","labels_url":"https://api.github.com/repos/RamsinghLab/arkas/issues/7/labels{/name}","comments_url":"https://api.github.com/repos/RamsinghLab/arkas/issues/7/comments","events_url":"https://api.github.com/repos/RamsinghLab/arkas/issues/7/events","html_url":"https://github.com/RamsinghLab/arkas/issues/7","id":156335203,"number":7,"title":"travis geneWiseAnalysis rowRanges","user":{"login":"arcolombo","id":5473099,"avatar_url":"https://avatars.githubusercontent.com/u/5473099?v=3","gravatar_id":"","url":"https://api.github.com/users/arcolombo","html_url":"https://github.com/arcolombo","followers_url":"https://api.github.com/users/arcolombo/followers","following_url":"https://api.github.com/users/arcolombo/following{/other_user}","gists_url":"https://api.github.com/users/arcolombo/gists{/gist_id}","starred_url":"https://api.github.com/users/arcolombo/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/arcolombo/subscriptions","organizations_url":"https://api.github.com/users/arcolombo/orgs","repos_url":"https://api.github.com/users/arcolombo/repos","events_url":"https://api.github.com/users/arcolombo/events{/privacy}","received_events_url":"https://api.github.com/users/arcolombo/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"milestone":null,"comments":2,"created_at":"2016-05-23T18:26:03Z","updated_at":"2016-06-06T02:34:27Z","closed_at":"2016-06-06T02:34:27Z","body":"turning off geneWiseAnalysis travis testing, for some reason it is not loading a\r\nnd running rowRanges correctly and errors out on collapseBundles, however for lo\r\ncal rendering it passes just fine.  it downloads SummarizedExperiment and Genomi\r\ncRanges, so it is unclear to why rowRanges errors.\r\n\r\n\r\nso the solution for now is to not have travis render geneWiseAnalysis, it does not properly call rowRanges when calling collapseBundles.  this could be that travis tries calling matrixStats::rowRanges()  and not GenomicRanges::rowRanges(). not sure.\r\n\r\n"}}
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