{"action":"reopened","issue":{"url":"https://api.github.com/repos/dpschreiner/icb/issues/32","repository_url":"https://api.github.com/repos/dpschreiner/icb","labels_url":"https://api.github.com/repos/dpschreiner/icb/issues/32/labels{/name}","comments_url":"https://api.github.com/repos/dpschreiner/icb/issues/32/comments","events_url":"https://api.github.com/repos/dpschreiner/icb/issues/32/events","html_url":"https://github.com/dpschreiner/icb/issues/32","id":174937847,"number":32,"title":"Script: get_image_metadata.py: analyze YouScope metadata files to extract what we want","user":{"login":"dpschreiner","id":4560485,"avatar_url":"https://avatars.githubusercontent.com/u/4560485?v=3","gravatar_id":"","url":"https://api.github.com/users/dpschreiner","html_url":"https://github.com/dpschreiner","followers_url":"https://api.github.com/users/dpschreiner/followers","following_url":"https://api.github.com/users/dpschreiner/following{/other_user}","gists_url":"https://api.github.com/users/dpschreiner/gists{/gist_id}","starred_url":"https://api.github.com/users/dpschreiner/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dpschreiner/subscriptions","organizations_url":"https://api.github.com/users/dpschreiner/orgs","repos_url":"https://api.github.com/users/dpschreiner/repos","events_url":"https://api.github.com/users/dpschreiner/events{/privacy}","received_events_url":"https://api.github.com/users/dpschreiner/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/dpschreiner/icb/labels/metadata","name":"metadata","color":"5319e7"},{"url":"https://api.github.com/repos/dpschreiner/icb/labels/omero","name":"omero","color":"b60205"},{"url":"https://api.github.com/repos/dpschreiner/icb/labels/youscope","name":"youscope","color":"c2e0c6"}],"state":"open","locked":false,"assignee":{"login":"dpschreiner","id":4560485,"avatar_url":"https://avatars.githubusercontent.com/u/4560485?v=3","gravatar_id":"","url":"https://api.github.com/users/dpschreiner","html_url":"https://github.com/dpschreiner","followers_url":"https://api.github.com/users/dpschreiner/followers","following_url":"https://api.github.com/users/dpschreiner/following{/other_user}","gists_url":"https://api.github.com/users/dpschreiner/gists{/gist_id}","starred_url":"https://api.github.com/users/dpschreiner/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dpschreiner/subscriptions","organizations_url":"https://api.github.com/users/dpschreiner/orgs","repos_url":"https://api.github.com/users/dpschreiner/repos","events_url":"https://api.github.com/users/dpschreiner/events{/privacy}","received_events_url":"https://api.github.com/users/dpschreiner/received_events","type":"User","site_admin":false},"assignees":[{"login":"dpschreiner","id":4560485,"avatar_url":"https://avatars.githubusercontent.com/u/4560485?v=3","gravatar_id":"","url":"https://api.github.com/users/dpschreiner","html_url":"https://github.com/dpschreiner","followers_url":"https://api.github.com/users/dpschreiner/followers","following_url":"https://api.github.com/users/dpschreiner/following{/other_user}","gists_url":"https://api.github.com/users/dpschreiner/gists{/gist_id}","starred_url":"https://api.github.com/users/dpschreiner/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dpschreiner/subscriptions","organizations_url":"https://api.github.com/users/dpschreiner/orgs","repos_url":"https://api.github.com/users/dpschreiner/repos","events_url":"https://api.github.com/users/dpschreiner/events{/privacy}","received_events_url":"https://api.github.com/users/dpschreiner/received_events","type":"User","site_admin":false}],"milestone":null,"comments":3,"created_at":"2016-09-04T08:29:26Z","updated_at":"2016-09-09T09:17:28Z","closed_at":null,"body":"I want to be able to get relevant metadata for individual images (and whole experiments) from the YouScope output files and output it in a form that usable in a script to upload to Omero.\r\n\r\nsee [README] (https://docs.google.com/document/d/1NnV-Yt0zSEtBWkF8Py4Tdje_gCzzP2hoSUOx5YEo8po/edit) in [metadata folder](https://drive.google.com/drive/u/1/folders/0B7EGx92Lw8fJR0E0bV9LSzJKbUU)\r\n\r\nTODO a python script to parse measurement_log.txt, keeping track of useful fields and keying off of the image name (previously stored fields will be for the saved image)"}}
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