{"action":"created","issue":{"url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/46","repository_url":"https://api.github.com/repos/CGATOxford/UMI-tools","labels_url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/46/labels{/name}","comments_url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/46/comments","events_url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/46/events","html_url":"https://github.com/CGATOxford/UMI-tools/issues/46","id":176369326,"number":46,"title":"Improve non-conda setup","user":{"login":"IanSudbery","id":5391758,"avatar_url":"https://avatars.githubusercontent.com/u/5391758?v=3","gravatar_id":"","url":"https://api.github.com/users/IanSudbery","html_url":"https://github.com/IanSudbery","followers_url":"https://api.github.com/users/IanSudbery/followers","following_url":"https://api.github.com/users/IanSudbery/following{/other_user}","gists_url":"https://api.github.com/users/IanSudbery/gists{/gist_id}","starred_url":"https://api.github.com/users/IanSudbery/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/IanSudbery/subscriptions","organizations_url":"https://api.github.com/users/IanSudbery/orgs","repos_url":"https://api.github.com/users/IanSudbery/repos","events_url":"https://api.github.com/users/IanSudbery/events{/privacy}","received_events_url":"https://api.github.com/users/IanSudbery/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":24,"created_at":"2016-09-12T13:00:15Z","updated_at":"2016-10-31T10:19:34Z","closed_at":null,"body":"Currently Conda installation works well, but installation via pip or downloading the tarball works much less well.\n\nThe current problems are:\n- Although setuptools allows downloading and installing of dependencies, the current setup.py requires them to be installed before it has the chance to install them\n- Assumes that setuptools is installed\n\nIn order to fix:\n- [x] Bootstrap setuptools to install or update setuptools before importing using ez_setup.py\n- [x] Remove requirements for normal dependencies and rely on install_requires to install them correctly\n- [x] Distribute pre-cythonised extensions so that Cython is not required just to run setup.py\n- [x] Create detailed instructions on installation.\n- [x] Test on Ubuntu, CentOS and Mac OSX\n"},"comment":{"url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/comments/257258467","html_url":"https://github.com/CGATOxford/UMI-tools/issues/46#issuecomment-257258467","issue_url":"https://api.github.com/repos/CGATOxford/UMI-tools/issues/46","id":257258467,"user":{"login":"TomSmithCGAT","id":6096414,"avatar_url":"https://avatars.githubusercontent.com/u/6096414?v=3","gravatar_id":"","url":"https://api.github.com/users/TomSmithCGAT","html_url":"https://github.com/TomSmithCGAT","followers_url":"https://api.github.com/users/TomSmithCGAT/followers","following_url":"https://api.github.com/users/TomSmithCGAT/following{/other_user}","gists_url":"https://api.github.com/users/TomSmithCGAT/gists{/gist_id}","starred_url":"https://api.github.com/users/TomSmithCGAT/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/TomSmithCGAT/subscriptions","organizations_url":"https://api.github.com/users/TomSmithCGAT/orgs","repos_url":"https://api.github.com/users/TomSmithCGAT/repos","events_url":"https://api.github.com/users/TomSmithCGAT/events{/privacy}","received_events_url":"https://api.github.com/users/TomSmithCGAT/received_events","type":"User","site_admin":false},"created_at":"2016-10-31T10:19:34Z","updated_at":"2016-10-31T10:19:34Z","body":"@IanSudbery. All sorted now. I'll merge back into the master and release a new version"}}
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