{"action":"created","issue":{"url":"https://api.github.com/repos/OpenMS/OpenMS/issues/2130","repository_url":"https://api.github.com/repos/OpenMS/OpenMS","labels_url":"https://api.github.com/repos/OpenMS/OpenMS/issues/2130/labels{/name}","comments_url":"https://api.github.com/repos/OpenMS/OpenMS/issues/2130/comments","events_url":"https://api.github.com/repos/OpenMS/OpenMS/issues/2130/events","html_url":"https://github.com/OpenMS/OpenMS/issues/2130","id":172624573,"number":2130,"title":"CDASH: MzIdentMLFile_test failed (bad lexical cast)","user":{"login":"timosachsenberg","id":5803621,"avatar_url":"https://avatars.githubusercontent.com/u/5803621?v=3","gravatar_id":"","url":"https://api.github.com/users/timosachsenberg","html_url":"https://github.com/timosachsenberg","followers_url":"https://api.github.com/users/timosachsenberg/followers","following_url":"https://api.github.com/users/timosachsenberg/following{/other_user}","gists_url":"https://api.github.com/users/timosachsenberg/gists{/gist_id}","starred_url":"https://api.github.com/users/timosachsenberg/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/timosachsenberg/subscriptions","organizations_url":"https://api.github.com/users/timosachsenberg/orgs","repos_url":"https://api.github.com/users/timosachsenberg/repos","events_url":"https://api.github.com/users/timosachsenberg/events{/privacy}","received_events_url":"https://api.github.com/users/timosachsenberg/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/OpenMS/OpenMS/labels/critical","name":"critical","color":"e11d21"},{"url":"https://api.github.com/repos/OpenMS/OpenMS/labels/File%20Format","name":"File Format","color":"fbca04"}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":4,"created_at":"2016-08-23T06:50:24Z","updated_at":"2016-08-23T08:03:56Z","closed_at":null,"body":"In CDASH we get an: Test: MzIdentMLFile_test (Failed) \r\nBuild: win8-VS10_x64-Release (scratchy.imp.fu-berlin.de)\r\n\r\nCan someone confirm this is reproducible and e.g. Win/VS related (e.g. cast from different, platform specific NAN notations or similar)\r\n\r\n\r\n +  line 231:  TEST_EQUAL(peptide_ids[2].getHits()[1].getPeptideEvidences()[i]==peptide_ids2[2].getHits()[1].getPeptideEvidences()[i],true): got 1, expected 1\r\n: passed\r\n\r\nchecking ([EXTRA] multiple runs) ... <'PeptideEvidence' without reference to the position in the originating sequence found.> occurred 6 times\r\nNo retention time found for 'SpectrumIdentificationResult'\r\n\r\n    creating new temporary filename 'MzIdentMLFile_test_241.tmp' (line 241)\r\nError: Caught std::exception\r\n - Message: bad lexical cast: source type value could not be interpreted as target\r\n: failed\r\nWarning: no subtests performed in '([EXTRA] multiple runs)' (line 251)!"},"comment":{"url":"https://api.github.com/repos/OpenMS/OpenMS/issues/comments/241657113","html_url":"https://github.com/OpenMS/OpenMS/issues/2130#issuecomment-241657113","issue_url":"https://api.github.com/repos/OpenMS/OpenMS/issues/2130","id":241657113,"user":{"login":"cbielow","id":6008722,"avatar_url":"https://avatars.githubusercontent.com/u/6008722?v=3","gravatar_id":"","url":"https://api.github.com/users/cbielow","html_url":"https://github.com/cbielow","followers_url":"https://api.github.com/users/cbielow/followers","following_url":"https://api.github.com/users/cbielow/following{/other_user}","gists_url":"https://api.github.com/users/cbielow/gists{/gist_id}","starred_url":"https://api.github.com/users/cbielow/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cbielow/subscriptions","organizations_url":"https://api.github.com/users/cbielow/orgs","repos_url":"https://api.github.com/users/cbielow/repos","events_url":"https://api.github.com/users/cbielow/events{/privacy}","received_events_url":"https://api.github.com/users/cbielow/received_events","type":"User","site_admin":false},"created_at":"2016-08-23T08:03:56Z","updated_at":"2016-08-23T08:03:56Z","body":"well.. it throws a std::exception, so the stack trace is gone once I set a break point when its caught...\r\nbut the output file (which is loaded again) contains a lot of\r\n`<cvParam accession=\"MS:1000894\" cvRef=\"PSI-MS\" name=\"retention time\" value=\"1.#QNAN\"/>`\r\nthat should be your culprit"}}
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