{"action":"reopened","issue":{"url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1351","repository_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen","labels_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1351/labels{/name}","comments_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1351/comments","events_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1351/events","html_url":"https://github.com/chapmanb/bcbio-nextgen/issues/1351","id":149703504,"number":1351,"title":"In Small RNAseq analysis, script path issue","user":{"login":"hmkim","id":4966343,"avatar_url":"https://avatars.githubusercontent.com/u/4966343?v=3","gravatar_id":"","url":"https://api.github.com/users/hmkim","html_url":"https://github.com/hmkim","followers_url":"https://api.github.com/users/hmkim/followers","following_url":"https://api.github.com/users/hmkim/following{/other_user}","gists_url":"https://api.github.com/users/hmkim/gists{/gist_id}","starred_url":"https://api.github.com/users/hmkim/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/hmkim/subscriptions","organizations_url":"https://api.github.com/users/hmkim/orgs","repos_url":"https://api.github.com/users/hmkim/repos","events_url":"https://api.github.com/users/hmkim/events{/privacy}","received_events_url":"https://api.github.com/users/hmkim/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":7,"created_at":"2016-04-20T08:52:07Z","updated_at":"2016-08-17T15:50:58Z","closed_at":null,"body":"I'm testing the example pipeline in bcbio (small rna seq)\r\n\r\nWhen I checking the data in pipeline, I saw the error log.\r\n\r\nmirqc_bcbio/work/mirdeep2$ less error_res.log\r\n\r\nRNAfold: invalid option -- n\r\nsh: 1: perform_controls.pl: not found\r\nRNAfold: invalid option -- n\r\nsh: 1: perform_controls.pl: not found\r\nRNAfold: invalid option -- n\r\nsh: 1: perform_controls.pl: not found\r\n\r\nI think this issue caused by script path  \r\n\r\nCould you check this issue ?"}}
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