{"action":"created","issue":{"url":"https://api.github.com/repos/Illumina/interop/issues/52","repository_url":"https://api.github.com/repos/Illumina/interop","labels_url":"https://api.github.com/repos/Illumina/interop/issues/52/labels{/name}","comments_url":"https://api.github.com/repos/Illumina/interop/issues/52/comments","events_url":"https://api.github.com/repos/Illumina/interop/issues/52/events","html_url":"https://github.com/Illumina/interop/issues/52","id":148220210,"number":52,"title":"MiSeq QScores / NextSeq current Cycle","user":{"login":"markliexo","id":4358003,"avatar_url":"https://avatars.githubusercontent.com/u/4358003?v=3","gravatar_id":"","url":"https://api.github.com/users/markliexo","html_url":"https://github.com/markliexo","followers_url":"https://api.github.com/users/markliexo/followers","following_url":"https://api.github.com/users/markliexo/following{/other_user}","gists_url":"https://api.github.com/users/markliexo/gists{/gist_id}","starred_url":"https://api.github.com/users/markliexo/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/markliexo/subscriptions","organizations_url":"https://api.github.com/users/markliexo/orgs","repos_url":"https://api.github.com/users/markliexo/repos","events_url":"https://api.github.com/users/markliexo/events{/privacy}","received_events_url":"https://api.github.com/users/markliexo/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/Illumina/interop/labels/question","name":"question","color":"cc317c"}],"state":"closed","locked":false,"assignee":null,"milestone":null,"comments":2,"created_at":"2016-04-14T00:49:20Z","updated_at":"2016-04-15T01:04:40Z","closed_at":"2016-04-15T01:04:40Z","body":"Thank you for putting together this software its great!\r\n\r\nI am trying to build a watcher for runs in process using your summary script. I noticed a few things:\r\n\r\n1. MiSeq - the QScores are 100% which obviously isn't reflected in the data.\r\n2. NextSeq & MiSeq - the clusterPF gets written for both reads as soon as Read1 data is availabe. Is this normal?\r\n\r\nI use the Recipe/RunSate.xml on the MiSeq to extract the current step and cycle. I've been told by Illumina that that information is available in one of the InterOp files. It would be great if your summary script to access that information and display.\r\n\r\nThank you!"},"comment":{"url":"https://api.github.com/repos/Illumina/interop/issues/comments/210231892","html_url":"https://github.com/Illumina/interop/issues/52#issuecomment-210231892","issue_url":"https://api.github.com/repos/Illumina/interop/issues/52","id":210231892,"user":{"login":"ezralanglois","id":2104878,"avatar_url":"https://avatars.githubusercontent.com/u/2104878?v=3","gravatar_id":"","url":"https://api.github.com/users/ezralanglois","html_url":"https://github.com/ezralanglois","followers_url":"https://api.github.com/users/ezralanglois/followers","following_url":"https://api.github.com/users/ezralanglois/following{/other_user}","gists_url":"https://api.github.com/users/ezralanglois/gists{/gist_id}","starred_url":"https://api.github.com/users/ezralanglois/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ezralanglois/subscriptions","organizations_url":"https://api.github.com/users/ezralanglois/orgs","repos_url":"https://api.github.com/users/ezralanglois/repos","events_url":"https://api.github.com/users/ezralanglois/events{/privacy}","received_events_url":"https://api.github.com/users/ezralanglois/received_events","type":"User","site_admin":false},"created_at":"2016-04-15T01:04:40Z","updated_at":"2016-04-15T01:04:40Z","body":"I am closing this out. There are two outstanding issues that were raised by this, which will stay open."}}