{"action":"created","issue":{"url":"https://api.github.com/repos/DTL-FAIRData/ODEX4all-UseCases/issues/6","repository_url":"https://api.github.com/repos/DTL-FAIRData/ODEX4all-UseCases","labels_url":"https://api.github.com/repos/DTL-FAIRData/ODEX4all-UseCases/issues/6/labels{/name}","comments_url":"https://api.github.com/repos/DTL-FAIRData/ODEX4all-UseCases/issues/6/comments","events_url":"https://api.github.com/repos/DTL-FAIRData/ODEX4all-UseCases/issues/6/events","html_url":"https://github.com/DTL-FAIRData/ODEX4all-UseCases/issues/6","id":175285559,"number":6,"title":"pig QTLdb: GFF3 file violates the spec.","user":{"login":"arnikz","id":7456848,"avatar_url":"https://avatars.githubusercontent.com/u/7456848?v=3","gravatar_id":"","url":"https://api.github.com/users/arnikz","html_url":"https://github.com/arnikz","followers_url":"https://api.github.com/users/arnikz/followers","following_url":"https://api.github.com/users/arnikz/following{/other_user}","gists_url":"https://api.github.com/users/arnikz/gists{/gist_id}","starred_url":"https://api.github.com/users/arnikz/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/arnikz/subscriptions","organizations_url":"https://api.github.com/users/arnikz/orgs","repos_url":"https://api.github.com/users/arnikz/repos","events_url":"https://api.github.com/users/arnikz/events{/privacy}","received_events_url":"https://api.github.com/users/arnikz/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":3,"created_at":"2016-09-06T16:00:29Z","updated_at":"2016-11-11T09:01:16Z","closed_at":null,"body":"Some required values/columns are missing in the GFF distribution. As a result, there are lines with less than nine columns, which makes parsing more challenging.\n\n(Pathological) example:\n\n<pre>\nChr.17  Animal QTLdb    Reproduction_QTL     61830469   61855765     QTL_ID=8814;Name=Teat number;Abbrev=TNUM;PUBMED_ID=22443659;trait_ID=167;trait=Teat number;breed=large white,meishan;FlankMarkers;VTO_name=nipple quantity;CMO_name=teat number;Map_Type=Linkage;Model=Mendelian;Test_Base=Genome-wise;peak_cM=85.9;Significance=Significant;P-value=<0.05;Likelihood_Ratio=67.2\n</pre>\n\n\nContact the [team/helpdesk](http://www.animalgenome.org/bioinfo/services/helpdesk?subj=/helpdesk.php).\n"},"comment":{"url":"https://api.github.com/repos/DTL-FAIRData/ODEX4all-UseCases/issues/comments/259912190","html_url":"https://github.com/DTL-FAIRData/ODEX4all-UseCases/issues/6#issuecomment-259912190","issue_url":"https://api.github.com/repos/DTL-FAIRData/ODEX4all-UseCases/issues/6","id":259912190,"user":{"login":"arnikz","id":7456848,"avatar_url":"https://avatars.githubusercontent.com/u/7456848?v=3","gravatar_id":"","url":"https://api.github.com/users/arnikz","html_url":"https://github.com/arnikz","followers_url":"https://api.github.com/users/arnikz/followers","following_url":"https://api.github.com/users/arnikz/following{/other_user}","gists_url":"https://api.github.com/users/arnikz/gists{/gist_id}","starred_url":"https://api.github.com/users/arnikz/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/arnikz/subscriptions","organizations_url":"https://api.github.com/users/arnikz/orgs","repos_url":"https://api.github.com/users/arnikz/repos","events_url":"https://api.github.com/users/arnikz/events{/privacy}","received_events_url":"https://api.github.com/users/arnikz/received_events","type":"User","site_admin":false},"created_at":"2016-11-11T09:01:16Z","updated_at":"2016-11-11T09:01:16Z","body":"Here is the list of QTL IDs:\r\n[107253](http://identifiers.org/pigQTLdb/107253),[107254](http://identifiers.org/pigQTLdb/107254),[107255](http://identifiers.org/pigQTLdb/107255),[107256](http://identifiers.org/pigQTLdb/107256),[37847](http://identifiers.org/pigQTLdb/37847),[37610](http://identifiers.org/pigQTLdb/37610),[37611](http://identifiers.org/pigQTLdb/37611),[37612](http://identifiers.org/pigQTLdb/37612),[37613](http://identifiers.org/pigQTLdb/37613),[37614](http://identifiers.org/pigQTLdb/37614),[37615](http://identifiers.org/pigQTLdb/37615),[37616](http://identifiers.org/pigQTLdb/37616),[37617](http://identifiers.org/pigQTLdb/37617),[37618](http://identifiers.org/pigQTLdb/37618),[37619](http://identifiers.org/pigQTLdb/37619),[37620](http://identifiers.org/pigQTLdb/37620),[57634](http://identifiers.org/pigQTLdb/57634),[107257](http://identifiers.org/pigQTLdb/107257),[107258](http://identifiers.org/pigQTLdb/107258),[107259](http://identifiers.org/pigQTLdb/107259),[107268](http://identifiers.org/pigQTLdb/107268),[101475](http://identifiers.org/pigQTLdb/101475),[101528](http://identifiers.org/pigQTLdb/101528),[107269](http://identifiers.org/pigQTLdb/107269),[95893](http://identifiers.org/pigQTLdb/95893),[95923](http://identifiers.org/pigQTLdb/95923),[38083](http://identifiers.org/pigQTLdb/38083),[56250](http://identifiers.org/pigQTLdb/56250),[107240](http://identifiers.org/pigQTLdb/107240),[107245](http://identifiers.org/pigQTLdb/107245),[107248](http://identifiers.org/pigQTLdb/107248),[57638](http://identifiers.org/pigQTLdb/57638),[106314](http://identifiers.org/pigQTLdb/106314),[106315](http://identifiers.org/pigQTLdb/106315),[106316](http://identifiers.org/pigQTLdb/106316),[106317](http://identifiers.org/pigQTLdb/106317),[106318](http://identifiers.org/pigQTLdb/106318),[106319](http://identifiers.org/pigQTLdb/106319),[106320](http://identifiers.org/pigQTLdb/106320),[106321](http://identifiers.org/pigQTLdb/106321),[107260](http://identifiers.org/pigQTLdb/107260),[107270](http://identifiers.org/pigQTLdb/107270),[71077](http://identifiers.org/pigQTLdb/71077),[71078](http://identifiers.org/pigQTLdb/71078),[71079](http://identifiers.org/pigQTLdb/71079),[71080](http://identifiers.org/pigQTLdb/71080),[71081](http://identifiers.org/pigQTLdb/71081),[71082](http://identifiers.org/pigQTLdb/71082),[71083](http://identifiers.org/pigQTLdb/71083),[71084](http://identifiers.org/pigQTLdb/71084),[71085](http://identifiers.org/pigQTLdb/71085),[62295](http://identifiers.org/pigQTLdb/62295),[107241](http://identifiers.org/pigQTLdb/107241),[107246](http://identifiers.org/pigQTLdb/107246),[107249](http://identifiers.org/pigQTLdb/107249),[38056](http://identifiers.org/pigQTLdb/38056),[107250](http://identifiers.org/pigQTLdb/107250),[107261](http://identifiers.org/pigQTLdb/107261),[107262](http://identifiers.org/pigQTLdb/107262),[95943](http://identifiers.org/pigQTLdb/95943),[95944](http://identifiers.org/pigQTLdb/95944),[95945](http://identifiers.org/pigQTLdb/95945),[95946](http://identifiers.org/pigQTLdb/95946),[95947](http://identifiers.org/pigQTLdb/95947),[95948](http://identifiers.org/pigQTLdb/95948),[95949](http://identifiers.org/pigQTLdb/95949),[106201](http://identifiers.org/pigQTLdb/106201),[106202](http://identifiers.org/pigQTLdb/106202),[106203](http://identifiers.org/pigQTLdb/106203),[106204](http://identifiers.org/pigQTLdb/106204),[106205](http://identifiers.org/pigQTLdb/106205),[106206](http://identifiers.org/pigQTLdb/106206),[106207](http://identifiers.org/pigQTLdb/106207),[37672](http://identifiers.org/pigQTLdb/37672),[37705](http://identifiers.org/pigQTLdb/37705),[37733](http://identifiers.org/pigQTLdb/37733),[37744](http://identifiers.org/pigQTLdb/37744),[38063](http://identifiers.org/pigQTLdb/38063),[38065](http://identifiers.org/pigQTLdb/38065),[95950](http://identifiers.org/pigQTLdb/95950),[106287](http://identifiers.org/pigQTLdb/106287),[106414](http://identifiers.org/pigQTLdb/106414),[106415](http://identifiers.org/pigQTLdb/106415),[107263](http://identifiers.org/pigQTLdb/107263),[101780](http://identifiers.org/pigQTLdb/101780),[101786](http://identifiers.org/pigQTLdb/101786),[101790](http://identifiers.org/pigQTLdb/101790),[101805](http://identifiers.org/pigQTLdb/101805),[101817](http://identifiers.org/pigQTLdb/101817),[101846](http://identifiers.org/pigQTLdb/101846),[101858](http://identifiers.org/pigQTLdb/101858),[101878](http://identifiers.org/pigQTLdb/101878),[101890](http://identifiers.org/pigQTLdb/101890),[101905](http://identifiers.org/pigQTLdb/101905),[101907](http://identifiers.org/pigQTLdb/101907),[101914](http://identifiers.org/pigQTLdb/101914),[101919](http://identifiers.org/pigQTLdb/101919),[101934](http://identifiers.org/pigQTLdb/101934),[101941](http://identifiers.org/pigQTLdb/101941),[101414](http://identifiers.org/pigQTLdb/101414),[101440](http://identifiers.org/pigQTLdb/101440),[101451](http://identifiers.org/pigQTLdb/101451),[101476](http://identifiers.org/pigQTLdb/101476),[101485](http://identifiers.org/pigQTLdb/101485),[101517](http://identifiers.org/pigQTLdb/101517),[101529](http://identifiers.org/pigQTLdb/101529),[101543](http://identifiers.org/pigQTLdb/101543),[101744](http://identifiers.org/pigQTLdb/101744),[101778](http://identifiers.org/pigQTLdb/101778),[106288](http://identifiers.org/pigQTLdb/106288),[106289](http://identifiers.org/pigQTLdb/106289),[106290](http://identifiers.org/pigQTLdb/106290),[106291](http://identifiers.org/pigQTLdb/106291),[107251](http://identifiers.org/pigQTLdb/107251),[107252](http://identifiers.org/pigQTLdb/107252),[107264](http://identifiers.org/pigQTLdb/107264),[107265](http://identifiers.org/pigQTLdb/107265),[60828](http://identifiers.org/pigQTLdb/60828),[64663](http://identifiers.org/pigQTLdb/64663),[107242](http://identifiers.org/pigQTLdb/107242),[107243](http://identifiers.org/pigQTLdb/107243),[107244](http://identifiers.org/pigQTLdb/107244),[107247](http://identifiers.org/pigQTLdb/107247),[95951](http://identifiers.org/pigQTLdb/95951),[95952](http://identifiers.org/pigQTLdb/95952),[107266](http://identifiers.org/pigQTLdb/107266),[107267](http://identifiers.org/pigQTLdb/107267)"}}
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