{"action":"created","issue":{"url":"https://api.github.com/repos/BackofenLab/IntaRNA/issues/41","repository_url":"https://api.github.com/repos/BackofenLab/IntaRNA","labels_url":"https://api.github.com/repos/BackofenLab/IntaRNA/issues/41/labels{/name}","comments_url":"https://api.github.com/repos/BackofenLab/IntaRNA/issues/41/comments","events_url":"https://api.github.com/repos/BackofenLab/IntaRNA/issues/41/events","html_url":"https://github.com/BackofenLab/IntaRNA/issues/41","id":191915245,"number":41,"title":"problem in installing IntaRNA","user":{"login":"NWAFU-daniel","id":23722211,"avatar_url":"https://avatars.githubusercontent.com/u/23722211?v=3","gravatar_id":"","url":"https://api.github.com/users/NWAFU-daniel","html_url":"https://github.com/NWAFU-daniel","followers_url":"https://api.github.com/users/NWAFU-daniel/followers","following_url":"https://api.github.com/users/NWAFU-daniel/following{/other_user}","gists_url":"https://api.github.com/users/NWAFU-daniel/gists{/gist_id}","starred_url":"https://api.github.com/users/NWAFU-daniel/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/NWAFU-daniel/subscriptions","organizations_url":"https://api.github.com/users/NWAFU-daniel/orgs","repos_url":"https://api.github.com/users/NWAFU-daniel/repos","events_url":"https://api.github.com/users/NWAFU-daniel/events{/privacy}","received_events_url":"https://api.github.com/users/NWAFU-daniel/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2016-11-28T04:03:58Z","updated_at":"2016-11-28T20:31:30Z","closed_at":"2016-11-28T20:31:30Z","body":"Making all in src\r\nmake[1]: Entering directory '/home/daniel/downloads/IntaRNA/src'\r\ng++ -DPACKAGE_NAME=\\\"IntaRNA\\\" -DPACKAGE_TARNAME=\\\"intarna\\\" -DPACKAGE_VERSION=\\\"1.2.5\\\" -DPACKAGE_STRING=\\\"IntaRNA\\ 1.2.5\\\" -DPACKAGE_BUGREPORT=\\\"intarna@informatik.uni-freiburg.de\\\" -DPACKAGE_URL=\\\"\\\" -DPACKAGE=\\\"intarna\\\" -DVERSION=\\\"1.2.5\\\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DNDEBUG=1 -I.     -O2 -g -O2 -MT basics.o -MD -MP -MF .deps/basics.Tpo -c -o basics.o basics.cpp\r\nIn file included from /usr/include/ViennaRNA/data_structures.h:157:0,\r\n                 from /usr/include/ViennaRNA/fold.h:4,\r\n                 from basics.h:28,\r\n                 from basics.cpp:1:\r\n/usr/include/ViennaRNA/params.h:445:1: error: ambiguating new declaration of ‘vrna_param_t* scale_parameters()’\r\n DEPRECATED(vrna_param_t *scale_parameters(void));\r\n ^\r\nIn file included from basics.h:19:0,\r\n                 from basics.cpp:1:\r\nenergy.h:10:8: note: old declaration ‘void scale_parameters()’\r\n void   scale_parameters();\r\n        ^\r\nMakefile:295: recipe for target 'basics.o' failed\r\nmake[1]: *** [basics.o] Error 1\r\nmake[1]: Leaving directory '/home/daniel/下载/IntaRNA/src'\r\nMakefile:238: recipe for target 'all-recursive' failed\r\nmake: *** [all-recursive] Error 1\r\nroot@y460:/home/daniel/downloads/IntaRNA# \r\n"},"comment":{"url":"https://api.github.com/repos/BackofenLab/IntaRNA/issues/comments/263385417","html_url":"https://github.com/BackofenLab/IntaRNA/issues/41#issuecomment-263385417","issue_url":"https://api.github.com/repos/BackofenLab/IntaRNA/issues/41","id":263385417,"user":{"login":"martin-mann","id":22291305,"avatar_url":"https://avatars.githubusercontent.com/u/22291305?v=3","gravatar_id":"","url":"https://api.github.com/users/martin-mann","html_url":"https://github.com/martin-mann","followers_url":"https://api.github.com/users/martin-mann/followers","following_url":"https://api.github.com/users/martin-mann/following{/other_user}","gists_url":"https://api.github.com/users/martin-mann/gists{/gist_id}","starred_url":"https://api.github.com/users/martin-mann/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/martin-mann/subscriptions","organizations_url":"https://api.github.com/users/martin-mann/orgs","repos_url":"https://api.github.com/users/martin-mann/repos","events_url":"https://api.github.com/users/martin-mann/events{/privacy}","received_events_url":"https://api.github.com/users/martin-mann/received_events","type":"User","site_admin":false},"created_at":"2016-11-28T20:31:30Z","updated_at":"2016-11-28T20:31:30Z","body":"I am quite sure you are compiling IntaRNA agains Vienna RNA package 2.*\r\n\r\nCurrently, you have to use an old [Vienna package version = 1.8.5](http://www.tbi.univie.ac.at/RNA/download/sourcecode/1_8_x/ViennaRNA-1.8.5.tar.gz) !!! \r\n\r\nPlease \r\n- follow the link\r\n- download, compile, and install VRNA 1.8.5\r\n- recompile IntaRNA 1.2.5 using VRNA 1.8.5\r\n\r\nWe are currently working on IntaRNA 2.0 that will use the recent VRNA package. Meanwhile, please follow the given description!"}}
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