{"action":"created","issue":{"url":"https://api.github.com/repos/HUPO-PSI/mzIdentML/issues/61","repository_url":"https://api.github.com/repos/HUPO-PSI/mzIdentML","labels_url":"https://api.github.com/repos/HUPO-PSI/mzIdentML/issues/61/labels{/name}","comments_url":"https://api.github.com/repos/HUPO-PSI/mzIdentML/issues/61/comments","events_url":"https://api.github.com/repos/HUPO-PSI/mzIdentML/issues/61/events","html_url":"https://github.com/HUPO-PSI/mzIdentML/issues/61","id":162166850,"number":61,"title":"Exclamation in names in XLMOD.obo","user":{"login":"lutzfischer","id":6330440,"avatar_url":"https://avatars.githubusercontent.com/u/6330440?v=3","gravatar_id":"","url":"https://api.github.com/users/lutzfischer","html_url":"https://github.com/lutzfischer","followers_url":"https://api.github.com/users/lutzfischer/followers","following_url":"https://api.github.com/users/lutzfischer/following{/other_user}","gists_url":"https://api.github.com/users/lutzfischer/gists{/gist_id}","starred_url":"https://api.github.com/users/lutzfischer/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/lutzfischer/subscriptions","organizations_url":"https://api.github.com/users/lutzfischer/orgs","repos_url":"https://api.github.com/users/lutzfischer/repos","events_url":"https://api.github.com/users/lutzfischer/events{/privacy}","received_events_url":"https://api.github.com/users/lutzfischer/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"germa","id":3297148,"avatar_url":"https://avatars.githubusercontent.com/u/3297148?v=3","gravatar_id":"","url":"https://api.github.com/users/germa","html_url":"https://github.com/germa","followers_url":"https://api.github.com/users/germa/followers","following_url":"https://api.github.com/users/germa/following{/other_user}","gists_url":"https://api.github.com/users/germa/gists{/gist_id}","starred_url":"https://api.github.com/users/germa/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/germa/subscriptions","organizations_url":"https://api.github.com/users/germa/orgs","repos_url":"https://api.github.com/users/germa/repos","events_url":"https://api.github.com/users/germa/events{/privacy}","received_events_url":"https://api.github.com/users/germa/received_events","type":"User","site_admin":false},"assignees":[{"login":"germa","id":3297148,"avatar_url":"https://avatars.githubusercontent.com/u/3297148?v=3","gravatar_id":"","url":"https://api.github.com/users/germa","html_url":"https://github.com/germa","followers_url":"https://api.github.com/users/germa/followers","following_url":"https://api.github.com/users/germa/following{/other_user}","gists_url":"https://api.github.com/users/germa/gists{/gist_id}","starred_url":"https://api.github.com/users/germa/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/germa/subscriptions","organizations_url":"https://api.github.com/users/germa/orgs","repos_url":"https://api.github.com/users/germa/repos","events_url":"https://api.github.com/users/germa/events{/privacy}","received_events_url":"https://api.github.com/users/germa/received_events","type":"User","site_admin":false}],"milestone":null,"comments":9,"created_at":"2016-06-24T15:03:56Z","updated_at":"2016-06-29T15:36:03Z","closed_at":null,"body":"I just wanted to add a cross-linker to the obo-file and when trying to check it with obo-edit I found, that it ignores everything in the name-field that comes after an exclamation mark.\r\n\r\n\r\nCurrently i had single site cross-linker modification named like \r\nname: [cross-linker name]![Hydrolyzed|Amidated|...]\r\ne.g.\r\nname: BS3!Hydrolyzed\r\n\r\nOnly in obo-edit I see instead BS3 now three times - for the cross-linker and for the two modified states that we have in the list.\r\n\r\nSeems like in an obo-file \"!\" starts a comment.\r\n\r\nSo we either have to escape the exclamation mark or just rename these.\r\nThe probably more sensible approach would be to rename these - as this would remove potential errors in future.\r\n\r\nHow much is the XLMOD already in use and can we still rename a mayor part of the entries?\r\nWhat would be a good alternative naming scheme?"},"comment":{"url":"https://api.github.com/repos/HUPO-PSI/mzIdentML/issues/comments/229395379","html_url":"https://github.com/HUPO-PSI/mzIdentML/issues/61#issuecomment-229395379","issue_url":"https://api.github.com/repos/HUPO-PSI/mzIdentML/issues/61","id":229395379,"user":{"login":"andrewrobertjones","id":16800053,"avatar_url":"https://avatars.githubusercontent.com/u/16800053?v=3","gravatar_id":"","url":"https://api.github.com/users/andrewrobertjones","html_url":"https://github.com/andrewrobertjones","followers_url":"https://api.github.com/users/andrewrobertjones/followers","following_url":"https://api.github.com/users/andrewrobertjones/following{/other_user}","gists_url":"https://api.github.com/users/andrewrobertjones/gists{/gist_id}","starred_url":"https://api.github.com/users/andrewrobertjones/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/andrewrobertjones/subscriptions","organizations_url":"https://api.github.com/users/andrewrobertjones/orgs","repos_url":"https://api.github.com/users/andrewrobertjones/repos","events_url":"https://api.github.com/users/andrewrobertjones/events{/privacy}","received_events_url":"https://api.github.com/users/andrewrobertjones/received_events","type":"User","site_admin":false},"created_at":"2016-06-29T15:36:03Z","updated_at":"2016-06-29T15:36:03Z","body":"@germa  will also insert intermediate parent terms for this"}}
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