{"action":"created","issue":{"url":"https://api.github.com/repos/geneontology/go-ontology/issues/12594","repository_url":"https://api.github.com/repos/geneontology/go-ontology","labels_url":"https://api.github.com/repos/geneontology/go-ontology/issues/12594/labels{/name}","comments_url":"https://api.github.com/repos/geneontology/go-ontology/issues/12594/comments","events_url":"https://api.github.com/repos/geneontology/go-ontology/issues/12594/events","html_url":"https://github.com/geneontology/go-ontology/issues/12594","id":172257453,"number":12594,"title":"NTRs: response to viscosity + copper ion transport across BBB/BCB","user":{"login":"paolaroncaglia","id":4982516,"avatar_url":"https://avatars.githubusercontent.com/u/4982516?v=3","gravatar_id":"","url":"https://api.github.com/users/paolaroncaglia","html_url":"https://github.com/paolaroncaglia","followers_url":"https://api.github.com/users/paolaroncaglia/followers","following_url":"https://api.github.com/users/paolaroncaglia/following{/other_user}","gists_url":"https://api.github.com/users/paolaroncaglia/gists{/gist_id}","starred_url":"https://api.github.com/users/paolaroncaglia/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/paolaroncaglia/subscriptions","organizations_url":"https://api.github.com/users/paolaroncaglia/orgs","repos_url":"https://api.github.com/users/paolaroncaglia/repos","events_url":"https://api.github.com/users/paolaroncaglia/events{/privacy}","received_events_url":"https://api.github.com/users/paolaroncaglia/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/geneontology/go-ontology/labels/New%20term%20request","name":"New term request","color":"bfe5bf"},{"url":"https://api.github.com/repos/geneontology/go-ontology/labels/transport","name":"transport","color":"ededed"}],"state":"closed","locked":false,"assignee":{"login":"paolaroncaglia","id":4982516,"avatar_url":"https://avatars.githubusercontent.com/u/4982516?v=3","gravatar_id":"","url":"https://api.github.com/users/paolaroncaglia","html_url":"https://github.com/paolaroncaglia","followers_url":"https://api.github.com/users/paolaroncaglia/followers","following_url":"https://api.github.com/users/paolaroncaglia/following{/other_user}","gists_url":"https://api.github.com/users/paolaroncaglia/gists{/gist_id}","starred_url":"https://api.github.com/users/paolaroncaglia/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/paolaroncaglia/subscriptions","organizations_url":"https://api.github.com/users/paolaroncaglia/orgs","repos_url":"https://api.github.com/users/paolaroncaglia/repos","events_url":"https://api.github.com/users/paolaroncaglia/events{/privacy}","received_events_url":"https://api.github.com/users/paolaroncaglia/received_events","type":"User","site_admin":false},"assignees":[{"login":"paolaroncaglia","id":4982516,"avatar_url":"https://avatars.githubusercontent.com/u/4982516?v=3","gravatar_id":"","url":"https://api.github.com/users/paolaroncaglia","html_url":"https://github.com/paolaroncaglia","followers_url":"https://api.github.com/users/paolaroncaglia/followers","following_url":"https://api.github.com/users/paolaroncaglia/following{/other_user}","gists_url":"https://api.github.com/users/paolaroncaglia/gists{/gist_id}","starred_url":"https://api.github.com/users/paolaroncaglia/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/paolaroncaglia/subscriptions","organizations_url":"https://api.github.com/users/paolaroncaglia/orgs","repos_url":"https://api.github.com/users/paolaroncaglia/repos","events_url":"https://api.github.com/users/paolaroncaglia/events{/privacy}","received_events_url":"https://api.github.com/users/paolaroncaglia/received_events","type":"User","site_admin":false}],"milestone":null,"comments":2,"created_at":"2016-08-20T06:49:06Z","updated_at":"2016-08-23T13:42:35Z","closed_at":"2016-08-23T13:42:35Z","body":"Stan requested the following terms via TermGenie freeform. The tool is broken, so I will add them manually: (for reference see http://wiki.geneontology.org/index.php/Ontology_meeting_2016-08-18#TG_freeform)\r\n\r\nname: response to viscosity\r\nnamespace: biological_process\r\ndef: \"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.\" [PMID:7061416]\r\nis_a: GO:0006950 ! response to stress\r\n\r\nname: copper ion transport across blood-brain barrier\r\nnamespace: biological_process\r\ndef: \"The directed movement of copper ions passing through the blood-brain barrier.\" [PMID:24614235]\r\nsynonym: \"copper ion transport across BBB\" RELATED []\r\nis_a: GO:0035434 ! copper ion transmembrane transport\r\n\r\nname: copper ion transport across blood-CSF barrier\r\nnamespace: biological_process\r\ndef: \"The directed movement of copper ions passing through the blood-cerebrospinal fluid barrier.\" [PMID:24614235]\r\nsynonym: \"copper ion transport across BCB\" EXACT []\r\nsynonym: \"copper ion transport across blood-cerebrospinal fluid barrier\" EXACT []\r\nis_a: GO:0035434 ! copper ion transmembrane transport"},"comment":{"url":"https://api.github.com/repos/geneontology/go-ontology/issues/comments/241734695","html_url":"https://github.com/geneontology/go-ontology/issues/12594#issuecomment-241734695","issue_url":"https://api.github.com/repos/geneontology/go-ontology/issues/12594","id":241734695,"user":{"login":"paolaroncaglia","id":4982516,"avatar_url":"https://avatars.githubusercontent.com/u/4982516?v=3","gravatar_id":"","url":"https://api.github.com/users/paolaroncaglia","html_url":"https://github.com/paolaroncaglia","followers_url":"https://api.github.com/users/paolaroncaglia/followers","following_url":"https://api.github.com/users/paolaroncaglia/following{/other_user}","gists_url":"https://api.github.com/users/paolaroncaglia/gists{/gist_id}","starred_url":"https://api.github.com/users/paolaroncaglia/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/paolaroncaglia/subscriptions","organizations_url":"https://api.github.com/users/paolaroncaglia/orgs","repos_url":"https://api.github.com/users/paolaroncaglia/repos","events_url":"https://api.github.com/users/paolaroncaglia/events{/privacy}","received_events_url":"https://api.github.com/users/paolaroncaglia/received_events","type":"User","site_admin":false},"created_at":"2016-08-23T13:42:34Z","updated_at":"2016-08-23T13:42:34Z","body":"Hi @slaulederkind,\r\nDone. The new term stanzas are below. Note that viscosity is a quality, not a stress \r\n(see http://www.ebi.ac.uk/ols/ontologies/oba/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FPATO_0000992)\r\nso I added ‘response to viscosity’ as is_a ‘response to abiotic stimulus’. \r\nAlso, the blood–brain barrier and the blood-CSF barrier are formed by cells, so I added ‘copper ion transport across blood-brain/CSF barrier’ as is_a copper ion transport, rather than is_a copper ion *transmembrane* transport.\r\n\r\n [Term]\r\n+id: GO:0097714\r\n+name: response to viscosity\r\n+namespace: biological_process\r\n+def: \"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.\" [GOC:sl, PMID:7061416]\r\n+is_a: GO:0009628 ! response to abiotic stimulus\r\n\r\n+[Term]\r\n+id: GO:0097715\r\n+name: cellular response to viscosity\r\n+namespace: biological_process\r\n+def: \"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.\" [GOC:sl, PMID:7061416]\r\n+is_a: GO:0071214 ! cellular response to abiotic stimulus\r\n+is_a: GO:0097714 ! response to viscosity\r\n\r\n+[Term]\r\n+id: GO:0097716\r\n+name: copper ion transport across blood-brain barrier\r\n+namespace: biological_process\r\n+def: \"The directed movement of copper (Cu) ions passing through the blood-brain barrier.\" [GOC:sl, PMID:24614235]\r\n+synonym: \"copper ion transport across BBB\" RELATED []\r\n+is_a: GO:0006825 ! copper ion transport\r\n\r\n+[Term]\r\n+id: GO:0097717\r\n+name: copper ion transport across blood-cerebrospinal fluid barrier\r\n+namespace: biological_process\r\n+def: \"The directed movement of copper (Cu) ions passing through the blood-cerebrospinal fluid barrier.\" [GOC:sl, PMID:24614235]\r\n+synonym: \"copper ion transport across BCB\" RELATED []\r\n+synonym: \"copper ion transport across blood-CSF barrier\" EXACT []\r\n+is_a: GO:0006825 ! copper ion transport"}}
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