{"action":"created","issue":{"url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/786","repository_url":"https://api.github.com/repos/cBioPortal/cbioportal","labels_url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/786/labels{/name}","comments_url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/786/comments","events_url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/786/events","html_url":"https://github.com/cBioPortal/cbioportal/issues/786","id":128268062,"number":786,"title":"Sample Numbering should be based on procurement date","user":{"login":"ritikakundra","id":12007862,"avatar_url":"https://avatars.githubusercontent.com/u/12007862?v=3","gravatar_id":"","url":"https://api.github.com/users/ritikakundra","html_url":"https://github.com/ritikakundra","followers_url":"https://api.github.com/users/ritikakundra/followers","following_url":"https://api.github.com/users/ritikakundra/following{/other_user}","gists_url":"https://api.github.com/users/ritikakundra/gists{/gist_id}","starred_url":"https://api.github.com/users/ritikakundra/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ritikakundra/subscriptions","organizations_url":"https://api.github.com/users/ritikakundra/orgs","repos_url":"https://api.github.com/users/ritikakundra/repos","events_url":"https://api.github.com/users/ritikakundra/events{/privacy}","received_events_url":"https://api.github.com/users/ritikakundra/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/cBioPortal/cbioportal/labels/bug","name":"bug","color":"fc2929"},{"url":"https://api.github.com/repos/cBioPortal/cbioportal/labels/hotfix","name":"hotfix","color":"eb6420"}],"state":"open","locked":false,"assignee":{"login":"inodb","id":1334004,"avatar_url":"https://avatars.githubusercontent.com/u/1334004?v=3","gravatar_id":"","url":"https://api.github.com/users/inodb","html_url":"https://github.com/inodb","followers_url":"https://api.github.com/users/inodb/followers","following_url":"https://api.github.com/users/inodb/following{/other_user}","gists_url":"https://api.github.com/users/inodb/gists{/gist_id}","starred_url":"https://api.github.com/users/inodb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/inodb/subscriptions","organizations_url":"https://api.github.com/users/inodb/orgs","repos_url":"https://api.github.com/users/inodb/repos","events_url":"https://api.github.com/users/inodb/events{/privacy}","received_events_url":"https://api.github.com/users/inodb/received_events","type":"User","site_admin":false},"milestone":{"url":"https://api.github.com/repos/cBioPortal/cbioportal/milestones/12","html_url":"https://github.com/cBioPortal/cbioportal/milestones/1.1.1","labels_url":"https://api.github.com/repos/cBioPortal/cbioportal/milestones/12/labels","id":1611984,"number":12,"title":"1.1.1","description":"","creator":{"login":"jjgao","id":840895,"avatar_url":"https://avatars.githubusercontent.com/u/840895?v=3","gravatar_id":"","url":"https://api.github.com/users/jjgao","html_url":"https://github.com/jjgao","followers_url":"https://api.github.com/users/jjgao/followers","following_url":"https://api.github.com/users/jjgao/following{/other_user}","gists_url":"https://api.github.com/users/jjgao/gists{/gist_id}","starred_url":"https://api.github.com/users/jjgao/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jjgao/subscriptions","organizations_url":"https://api.github.com/users/jjgao/orgs","repos_url":"https://api.github.com/users/jjgao/repos","events_url":"https://api.github.com/users/jjgao/events{/privacy}","received_events_url":"https://api.github.com/users/jjgao/received_events","type":"User","site_admin":false},"open_issues":22,"closed_issues":0,"state":"open","created_at":"2016-02-29T14:54:47Z","updated_at":"2016-03-01T23:02:29Z","due_on":"2016-03-12T05:00:00Z","closed_at":null},"comments":8,"created_at":"2016-01-22T23:12:45Z","updated_at":"2016-03-02T22:18:31Z","closed_at":null,"body":"Two studies have raised this issue of having samples numbers allotted alphabetically rather than what was procured first causing confusion during comparison. Sometime the Primary Vs Met is also not allotted right.\r\n\r\nhttps://cbioportal.mskcc.org/case.do?cancer_study_id=egc_mskcc_2015_janjigiany&case_id=YJ-egc-049\r\n\r\nhttps://cbioportal.mskcc.org/case.do?cancer_study_id=egc_mskcc_2015_janjigiany&case_id=YJ-egc-090#nav_case_ids=YJ-egc-090"},"comment":{"url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/comments/191457906","html_url":"https://github.com/cBioPortal/cbioportal/issues/786#issuecomment-191457906","issue_url":"https://api.github.com/repos/cBioPortal/cbioportal/issues/786","id":191457906,"user":{"login":"inodb","id":1334004,"avatar_url":"https://avatars.githubusercontent.com/u/1334004?v=3","gravatar_id":"","url":"https://api.github.com/users/inodb","html_url":"https://github.com/inodb","followers_url":"https://api.github.com/users/inodb/followers","following_url":"https://api.github.com/users/inodb/following{/other_user}","gists_url":"https://api.github.com/users/inodb/gists{/gist_id}","starred_url":"https://api.github.com/users/inodb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/inodb/subscriptions","organizations_url":"https://api.github.com/users/inodb/orgs","repos_url":"https://api.github.com/users/inodb/repos","events_url":"https://api.github.com/users/inodb/events{/privacy}","received_events_url":"https://api.github.com/users/inodb/received_events","type":"User","site_admin":false},"created_at":"2016-03-02T22:18:31Z","updated_at":"2016-03-02T22:18:31Z","body":"Basically all the `SPECIMEN_REFERENCE_NUMBER` and `SpecimenReferenceNumber` in the databases have to be changed to `SAMPLE_ID`. In the mean time I made a PR that supports all of them: https://github.com/cBioPortal/cbioportal/pull/887. After the changes to the database have been made we can do the `OTHER_SAMPLE_ID` to `SAMPLE_ID` normalization in the importer."}}