{"action":"closed","issue":{"url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1688","repository_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen","labels_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1688/labels{/name}","comments_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1688/comments","events_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1688/events","html_url":"https://github.com/chapmanb/bcbio-nextgen/issues/1688","id":195271904,"number":1688,"title":"bcbio installation - hg38","user":{"login":"matthdsm","id":11850640,"avatar_url":"https://avatars.githubusercontent.com/u/11850640?v=3","gravatar_id":"","url":"https://api.github.com/users/matthdsm","html_url":"https://github.com/matthdsm","followers_url":"https://api.github.com/users/matthdsm/followers","following_url":"https://api.github.com/users/matthdsm/following{/other_user}","gists_url":"https://api.github.com/users/matthdsm/gists{/gist_id}","starred_url":"https://api.github.com/users/matthdsm/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/matthdsm/subscriptions","organizations_url":"https://api.github.com/users/matthdsm/orgs","repos_url":"https://api.github.com/users/matthdsm/repos","events_url":"https://api.github.com/users/matthdsm/events{/privacy}","received_events_url":"https://api.github.com/users/matthdsm/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2016-12-13T14:47:31Z","updated_at":"2016-12-13T15:14:20Z","closed_at":"2016-12-13T15:14:20Z","body":"Hi Brad, \r\n\r\nI'm (still) trying to install a clean dev version of bcbio, but when I upgrade with \r\n`bcbio_nextgen.py upgrade -u development --datatarget vep --datatarget dbnsfp`, neither vep or dbnsfp gets installed. Could there be some config file we forgot to edit to make this work for hg38?\r\n\r\nThanks\r\nM\r\n"}}
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