{"action":"created","issue":{"url":"https://api.github.com/repos/PacificBiosciences/pitchfork/issues/292","repository_url":"https://api.github.com/repos/PacificBiosciences/pitchfork","labels_url":"https://api.github.com/repos/PacificBiosciences/pitchfork/issues/292/labels{/name}","comments_url":"https://api.github.com/repos/PacificBiosciences/pitchfork/issues/292/comments","events_url":"https://api.github.com/repos/PacificBiosciences/pitchfork/issues/292/events","html_url":"https://github.com/PacificBiosciences/pitchfork/issues/292","id":178528753,"number":292,"title":"cannot stat ‘libopenblas_sandybridgep-r0.2.18.so’ when installing pbalign","user":{"login":"pawelosipowski","id":3865712,"avatar_url":"https://avatars.githubusercontent.com/u/3865712?v=3","gravatar_id":"","url":"https://api.github.com/users/pawelosipowski","html_url":"https://github.com/pawelosipowski","followers_url":"https://api.github.com/users/pawelosipowski/followers","following_url":"https://api.github.com/users/pawelosipowski/following{/other_user}","gists_url":"https://api.github.com/users/pawelosipowski/gists{/gist_id}","starred_url":"https://api.github.com/users/pawelosipowski/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pawelosipowski/subscriptions","organizations_url":"https://api.github.com/users/pawelosipowski/orgs","repos_url":"https://api.github.com/users/pawelosipowski/repos","events_url":"https://api.github.com/users/pawelosipowski/events{/privacy}","received_events_url":"https://api.github.com/users/pawelosipowski/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":9,"created_at":"2016-09-22T05:59:44Z","updated_at":"2016-09-23T18:15:17Z","closed_at":null,"body":"I get this with the newly cloned pitchfork: \r\n```\r\nmake[2]: Entering directory `/storage3/long_read_assembly/soft/pitchfork/workspace/OpenBLAS-0.2.18'\r\nmake -j 24 -f Makefile.install install\r\nmake[3]: Entering directory `/storage3/long_read_assembly/soft/pitchfork/workspace/OpenBLAS-0.2.18'\r\nGenerating openblas_config.h in /storage3/long_read_assembly/soft/pitchfork/staging/OpenBLAS-0.2.18/include\r\nGenerating f77blas.h in /storage3/long_read_assembly/soft/pitchfork/staging/OpenBLAS-0.2.18/include\r\nGenerating cblas.h in /storage3/long_read_assembly/soft/pitchfork/staging/OpenBLAS-0.2.18/include\r\nCopying LAPACKE header files to /storage3/long_read_assembly/soft/pitchfork/staging/OpenBLAS-0.2.18/include\r\nCopying the static library to /storage3/long_read_assembly/soft/pitchfork/staging/OpenBLAS-0.2.18/lib\r\nCopying the shared library to /storage3/long_read_assembly/soft/pitchfork/staging/OpenBLAS-0.2.18/lib\r\ninstall: cannot stat ‘libopenblas_sandybridgep-r0.2.18.so’: No such file or directory\r\nmake[3]: *** [install] Error 1\r\nmake[3]: Leaving directory `/storage3/long_read_assembly/soft/pitchfork/workspace/OpenBLAS-0.2.18'\r\nmake[2]: *** [install] Error 2\r\nmake[2]: Leaving directory `/storage3/long_read_assembly/soft/pitchfork/workspace/OpenBLAS-0.2.18'\r\nmake[1]: *** [/storage3/long_read_assembly/soft/pitchfork/deployment/var/pkg/OpenBLAS-0.2.18] Error 1\r\nmake[1]: Leaving directory `/storage3/long_read_assembly/soft/pitchfork/ports/thirdparty/openblas'\r\nmake: *** [openblas] Error 2\r\n```"},"comment":{"url":"https://api.github.com/repos/PacificBiosciences/pitchfork/issues/comments/249264614","html_url":"https://github.com/PacificBiosciences/pitchfork/issues/292#issuecomment-249264614","issue_url":"https://api.github.com/repos/PacificBiosciences/pitchfork/issues/292","id":249264614,"user":{"login":"pawelosipowski","id":3865712,"avatar_url":"https://avatars.githubusercontent.com/u/3865712?v=3","gravatar_id":"","url":"https://api.github.com/users/pawelosipowski","html_url":"https://github.com/pawelosipowski","followers_url":"https://api.github.com/users/pawelosipowski/followers","following_url":"https://api.github.com/users/pawelosipowski/following{/other_user}","gists_url":"https://api.github.com/users/pawelosipowski/gists{/gist_id}","starred_url":"https://api.github.com/users/pawelosipowski/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pawelosipowski/subscriptions","organizations_url":"https://api.github.com/users/pawelosipowski/orgs","repos_url":"https://api.github.com/users/pawelosipowski/repos","events_url":"https://api.github.com/users/pawelosipowski/events{/privacy}","received_events_url":"https://api.github.com/users/pawelosipowski/received_events","type":"User","site_admin":false},"created_at":"2016-09-23T18:15:17Z","updated_at":"2016-09-23T18:15:17Z","body":"I fallowed but again\r\n```\r\nCopying the shared library to /storage3/long_read_assembly/soft/pitchfork/staging/OpenBLAS-0.2.18/lib\r\ninstall: cannot stat ‘libopenblas_sandybridgep-r0.2.18.so’: No such file or directory\r\nmake[3]: *** [install] Error 1\r\nmake[3]: Leaving directory `/storage3/long_read_assembly/soft/pitchfork/workspace/OpenBLAS-0.2.18'\r\nmake[2]: *** [install] Error 2\r\nmake[2]: Leaving directory `/storage3/long_read_assembly/soft/pitchfork/workspace/OpenBLAS-0.2.18'\r\nmake[1]: *** [/storage3/long_read_assembly/soft/pitchfork/deployment/var/pkg/OpenBLAS-0.2.18] Error 1\r\nmake[1]: Leaving directory `/storage3/long_read_assembly/soft/pitchfork/ports/thirdparty/openblas'\r\nmake: *** [openblas] Error 2\r\n```\r\n"}}
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