{"action":"created","issue":{"url":"https://api.github.com/repos/lvdmaaten/bhtsne/issues/30","repository_url":"https://api.github.com/repos/lvdmaaten/bhtsne","labels_url":"https://api.github.com/repos/lvdmaaten/bhtsne/issues/30/labels{/name}","comments_url":"https://api.github.com/repos/lvdmaaten/bhtsne/issues/30/comments","events_url":"https://api.github.com/repos/lvdmaaten/bhtsne/issues/30/events","html_url":"https://github.com/lvdmaaten/bhtsne/issues/30","id":172335917,"number":30,"title":"Can not read and pass on the results","user":{"login":"Nightrord","id":9019223,"avatar_url":"https://avatars.githubusercontent.com/u/9019223?v=3","gravatar_id":"","url":"https://api.github.com/users/Nightrord","html_url":"https://github.com/Nightrord","followers_url":"https://api.github.com/users/Nightrord/followers","following_url":"https://api.github.com/users/Nightrord/following{/other_user}","gists_url":"https://api.github.com/users/Nightrord/gists{/gist_id}","starred_url":"https://api.github.com/users/Nightrord/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Nightrord/subscriptions","organizations_url":"https://api.github.com/users/Nightrord/orgs","repos_url":"https://api.github.com/users/Nightrord/repos","events_url":"https://api.github.com/users/Nightrord/events{/privacy}","received_events_url":"https://api.github.com/users/Nightrord/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":8,"created_at":"2016-08-21T19:13:00Z","updated_at":"2016-08-22T15:22:24Z","closed_at":null,"body":"I ran python bh_tsne on a 95 * 745544 matrix, and here is my command ./bhtsne.py -i ~/Dropbox/github/data/lan_uid_matrix.txt -o ~/Dropbox/github/data/lan_uid_coordinate.txt -p 5 -d 2 -t 1 -v \r\n\r\nbut it shows the error as follows:\r\nError: could not open data file.\r\nTraceback (most recent call last):\r\n  File \"./bhtsne.py\", line 233, in <module>\r\n    exit(main(argv))\r\n  File \"./bhtsne.py\", line 224, in main\r\n    verbose=argp.verbose, initial_dims=argp.initial_dims, use_pca=argp.use_pca, max_iter=argp.max_iter):\r\n  File \"./bhtsne.py\", line 211, in run_bh_tsne\r\n    for result in bh_tsne(tmp_dir_path, verbose):\r\n  File \"./bhtsne.py\", line 164, in bh_tsne\r\n    with open(path_join(workdir, 'result.dat'), 'rb') as output_file:\r\nIOError: [Errno 2] No such file or directory: '/var/folders/92/8ty0c6392m773r5tbp4s9gy80000gp/T/tmpakdFT0/result.dat'\r\n\r\nI don't know why it can not find the result.dat. Could you help me solve it?\r\n\r\nThanks in advance\r\n"},"comment":{"url":"https://api.github.com/repos/lvdmaaten/bhtsne/issues/comments/241448479","html_url":"https://github.com/lvdmaaten/bhtsne/issues/30#issuecomment-241448479","issue_url":"https://api.github.com/repos/lvdmaaten/bhtsne/issues/30","id":241448479,"user":{"login":"Nightrord","id":9019223,"avatar_url":"https://avatars.githubusercontent.com/u/9019223?v=3","gravatar_id":"","url":"https://api.github.com/users/Nightrord","html_url":"https://github.com/Nightrord","followers_url":"https://api.github.com/users/Nightrord/followers","following_url":"https://api.github.com/users/Nightrord/following{/other_user}","gists_url":"https://api.github.com/users/Nightrord/gists{/gist_id}","starred_url":"https://api.github.com/users/Nightrord/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Nightrord/subscriptions","organizations_url":"https://api.github.com/users/Nightrord/orgs","repos_url":"https://api.github.com/users/Nightrord/repos","events_url":"https://api.github.com/users/Nightrord/events{/privacy}","received_events_url":"https://api.github.com/users/Nightrord/received_events","type":"User","site_admin":false},"created_at":"2016-08-22T15:22:24Z","updated_at":"2016-08-22T15:22:24Z","body":"The file data.dat has been written. But there is no result.dat. I think the problem happens on step 3. "}}
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