{"action":"created","issue":{"url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/439","repository_url":"https://api.github.com/repos/PacificBiosciences/FALCON","labels_url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/439/labels{/name}","comments_url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/439/comments","events_url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/439/events","html_url":"https://github.com/PacificBiosciences/FALCON/issues/439","id":175991777,"number":439,"title":"SGE grid permissions","user":{"login":"kevlim83","id":13236920,"avatar_url":"https://avatars.githubusercontent.com/u/13236920?v=3","gravatar_id":"","url":"https://api.github.com/users/kevlim83","html_url":"https://github.com/kevlim83","followers_url":"https://api.github.com/users/kevlim83/followers","following_url":"https://api.github.com/users/kevlim83/following{/other_user}","gists_url":"https://api.github.com/users/kevlim83/gists{/gist_id}","starred_url":"https://api.github.com/users/kevlim83/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kevlim83/subscriptions","organizations_url":"https://api.github.com/users/kevlim83/orgs","repos_url":"https://api.github.com/users/kevlim83/repos","events_url":"https://api.github.com/users/kevlim83/events{/privacy}","received_events_url":"https://api.github.com/users/kevlim83/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":3,"created_at":"2016-09-09T11:55:40Z","updated_at":"2016-09-11T15:36:36Z","closed_at":null,"body":"Hi,\r\n\r\nI have been trying to run falcon, it seems that everytime the pipeline creates a shell file e.g. \"prepare_rdb.sh\" and submits it to the cluster, it does not change the file permissions to executable. As a result, the job automatically fails.\r\n\r\nI can change the permissions manually each time it fails and restart falcon. But this is inefficient as I have to check back everytime. Is this because I am not setting the configuration file correctly? Is there a workaround for this?\r\n\r\nThanks.\r\nK"},"comment":{"url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/comments/246186635","html_url":"https://github.com/PacificBiosciences/FALCON/issues/439#issuecomment-246186635","issue_url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/439","id":246186635,"user":{"login":"pb-cdunn","id":12086299,"avatar_url":"https://avatars.githubusercontent.com/u/12086299?v=3","gravatar_id":"","url":"https://api.github.com/users/pb-cdunn","html_url":"https://github.com/pb-cdunn","followers_url":"https://api.github.com/users/pb-cdunn/followers","following_url":"https://api.github.com/users/pb-cdunn/following{/other_user}","gists_url":"https://api.github.com/users/pb-cdunn/gists{/gist_id}","starred_url":"https://api.github.com/users/pb-cdunn/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pb-cdunn/subscriptions","organizations_url":"https://api.github.com/users/pb-cdunn/orgs","repos_url":"https://api.github.com/users/pb-cdunn/repos","events_url":"https://api.github.com/users/pb-cdunn/events{/privacy}","received_events_url":"https://api.github.com/users/pb-cdunn/received_events","type":"User","site_admin":false},"created_at":"2016-09-11T15:36:36Z","updated_at":"2016-09-11T15:36:36Z","body":"```\r\ncommit 9769c6f8cdaf460f8c333b811cde5f543270523d\r\nDate:   Wed Dec 9 15:59:14 2015\r\n```\r\n```\r\ncommit 224c1930e24cea8fb79dbc3850fae27b479e6950\r\nDate:   Tue Dec 8 14:24:30 2015\r\n```\r\nYou are far out of date. Management doesn't like us to spend much time on GitHub issues anyway. We certainly cannot respond to something this old."}}
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