{"action":"created","issue":{"url":"https://api.github.com/repos/tischi/fiji-correct-3d-drift/issues/3","repository_url":"https://api.github.com/repos/tischi/fiji-correct-3d-drift","labels_url":"https://api.github.com/repos/tischi/fiji-correct-3d-drift/issues/3/labels{/name}","comments_url":"https://api.github.com/repos/tischi/fiji-correct-3d-drift/issues/3/comments","events_url":"https://api.github.com/repos/tischi/fiji-correct-3d-drift/issues/3/events","html_url":"https://github.com/tischi/fiji-correct-3d-drift/issues/3","id":183070230,"number":3,"title":"Subpixel resolution fails","user":{"login":"Meyenhofer","id":729273,"avatar_url":"https://avatars.githubusercontent.com/u/729273?v=3","gravatar_id":"","url":"https://api.github.com/users/Meyenhofer","html_url":"https://github.com/Meyenhofer","followers_url":"https://api.github.com/users/Meyenhofer/followers","following_url":"https://api.github.com/users/Meyenhofer/following{/other_user}","gists_url":"https://api.github.com/users/Meyenhofer/gists{/gist_id}","starred_url":"https://api.github.com/users/Meyenhofer/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Meyenhofer/subscriptions","organizations_url":"https://api.github.com/users/Meyenhofer/orgs","repos_url":"https://api.github.com/users/Meyenhofer/repos","events_url":"https://api.github.com/users/Meyenhofer/events{/privacy}","received_events_url":"https://api.github.com/users/Meyenhofer/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":14,"created_at":"2016-10-14T14:51:00Z","updated_at":"2016-10-18T07:38:34Z","closed_at":"2016-10-18T07:27:55Z","body":"with the subpixel resolution the shifts are calculated, but when starting to apply them, it fails at the very first iteration with the error:\r\n\r\n```\r\nTraceback (most recent call last):\r\n  File \"Plugins/Registration/Correct_3D_Drift_Plus--ImgLib2.py\", line 603, in <module>\r\n  File \"Plugins/Registration/Correct_3D_Drift_Plus--ImgLib2.py\", line 579, in run\r\n  File \"Plugins/Registration/Correct_3D_Drift_Plus--ImgLib2.py\", line 444, in register_hyperstack_subpixel\r\n  File \"Plugins/Registration/Correct_3D_Drift_Plus--ImgLib2.py\", line 63, in translate_single_stack_using_imglib2\r\n\tat net.imglib2.position.transform.Floor.move(Floor.java:152)\r\n\tat net.imglib2.realtransform.AffineRandomAccessible$AffineRandomAccess.bck(AffineRandomAccessible.java:105)\r\n\tat net.imglib2.view.RandomAccessibleIntervalCursor.reset(RandomAccessibleIntervalCursor.java:137)\r\n\tat net.imglib2.view.RandomAccessibleIntervalCursor.<init>(RandomAccessibleIntervalCursor.java:79)\r\n\tat net.imglib2.view.IterableRandomAccessibleInterval.cursor(IterableRandomAccessibleInterval.java:103)\r\n\tat net.imglib2.view.IterableRandomAccessibleInterval.iterator(IterableRandomAccessibleInterval.java:97)\r\n\tat net.imglib2.view.IntervalView.iterator(IntervalView.java:162)\r\n\tat net.imglib2.view.Views.iterable(Views.java:743)\r\n\tat net.imglib2.display.projector.IterableIntervalProjector2D.map(IterableIntervalProjector2D.java:119)\r\n\tat net.imglib2.img.display.imagej.ImageJVirtualStack.getProcessor(ImageJVirtualStack.java:174)\r\n\tat ij.ImagePlus.setStack(ImagePlus.java:661)\r\n\tat ij.ImagePlus.<init>(ImagePlus.java:149)\r\n\tat net.imglib2.img.display.imagej.ImageJFunctions.makeImagePlus(ImageJFunctions.java:285)\r\n\tat net.imglib2.img.display.imagej.ImageJFunctions.wrapUnsignedShort(ImageJFunctions.java:488)\r\n\tat net.imglib2.img.display.imagej.ImageJFunctions.wrapUnsignedShort(ImageJFunctions.java:475)\r\n\tat sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)\r\n\tat sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)\r\n\tat sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)\r\n\tat java.lang.reflect.Method.invoke(Method.java:498)\r\n\r\njava.lang.ArrayIndexOutOfBoundsException: java.lang.ArrayIndexOutOfBoundsException: 2\r\n```\r\n\r\nassuming 4e3d9335a3afe8689c0113b83eb5a60442ec931d was the version you posed in the [forum](http://forum.imagej.net/t/correct-3d-drift-erratic-behaviour-with-two-channel-stacks/2987/12)"},"comment":{"url":"https://api.github.com/repos/tischi/fiji-correct-3d-drift/issues/comments/254430472","html_url":"https://github.com/tischi/fiji-correct-3d-drift/issues/3#issuecomment-254430472","issue_url":"https://api.github.com/repos/tischi/fiji-correct-3d-drift/issues/3","id":254430472,"user":{"login":"tischi","id":2157566,"avatar_url":"https://avatars.githubusercontent.com/u/2157566?v=3","gravatar_id":"","url":"https://api.github.com/users/tischi","html_url":"https://github.com/tischi","followers_url":"https://api.github.com/users/tischi/followers","following_url":"https://api.github.com/users/tischi/following{/other_user}","gists_url":"https://api.github.com/users/tischi/gists{/gist_id}","starred_url":"https://api.github.com/users/tischi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tischi/subscriptions","organizations_url":"https://api.github.com/users/tischi/orgs","repos_url":"https://api.github.com/users/tischi/repos","events_url":"https://api.github.com/users/tischi/events{/privacy}","received_events_url":"https://api.github.com/users/tischi/received_events","type":"User","site_admin":false},"created_at":"2016-10-18T07:38:34Z","updated_at":"2016-10-18T07:38:34Z","body":"ok! thank you for testing!\r\n"}}
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