{"action":"created","comment":{"url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/comments/90716112","pull_request_review_id":11235371,"id":90716112,"diff_hunk":"@@ -52,35 +52,176 @@ properties:\n       - string\n       - \"null\"\n \n-  treatment_or_therapy:\n+  days_to_treatment:\n     term:\n-      $ref: \"_terms.yaml#/treatment_or_therapy\"\n+      $ref: \"_terms.yaml#/days_to_treatment\"\n+    type: number\n+\n+  days_to_treatment_end:\n+    term:\n+      $ref: \"_terms.yaml#/days_to_treatment_end\"\n+    type: number\n+\n+  days_to_treatment_start:\n+    term:\n+      $ref: \"_terms.yaml#/days_to_treatment_start\"\n+    type: number\n+\n+  therapeutic_agents:\n+    term:\n+      $ref: \"_terms.yaml#/therapeutic_agents\"\n+    type: string\n+\n+  treatment_anatomic_site:\n+    term:\n+      $ref: \"_terms.yaml#/treatment_anatomic_site\"\n     enum:\n-      - \"yes\"\n-      - \"no\"\n-      - unknown\n-      - not reported\n+      - Abdomen, total\n+      - Arm\n+      - Ascites\n+      - Axillary\n+      - Body, total\n+      - Bone\n+      - Bone, non-spine\n+      - Brain, focal\n+      - Brain, whole\n+      - Brain-C2\n+      - Breast\n+      - Cervical\n+      - Chest Wall\n+      - Effusion\n+      - Epitrochlear\n+      - Eye\n+      - Femoral\n+      - Gastrointestinal, Colon\n+      - Gastrointestinal, Gallbladder\n+      - Gastrointestinal, Intestine\n+      - Gastrointestinal, Liver\n+      - Gastrointestinal, NOS\n+      - Gastrointestinal, Pancreas\n+      - Gastrointestinal, Rectum\n+      - Gastrointestinal, Stomach\n+      - Genitourinary, Bladder\n+      - Genitourinary, Kidney\n+      - Genitourinary, NOS\n+      - Genitourinary, Prostate\n+      - Genitourinary, Prostate and Seminal Vesicles\n+      - Head\n+      - Head, Face, or Neck\n+      - Hilar\n+      - Iliac-common\n+      - Iliac-external\n+      - Inguinal\n+      - Internal Mammary Nodes\n+      - Leg\n+      - Lung\n+      - Lymph Nodes\n+      - Lymph node, distant (specify site)\n+      - Lymph node, locoregional (specify site)\n+      - Mantle\n+      - Mediastinal\n+      - Mediastinum\n+      - Mesenteric\n+      - Occipital\n+      - Other\n+      - Paraaortic\n+      - Parametrium\n+      - Parotid\n+      - Pelvis\n+      - Popliteal\n+      - Primary tumor site\n+      - Prostate\n+      - Prostate Bed\n+      - Prostate, Seminal Vesicles and Lymph Nodes\n+      - Rectum\n+      - Retroperitoneal\n+      - Sacrum\n+      - Seminal vesicles\n+      - Shoulder\n+      - Skin, lower extremity, local\n+      - Skin, total\n+      - Skin, trunk, local\n+      - Skin, upper extremity, local\n+      - Spine\n+      - Spine, whole\n+      - Splenic\n+      - Submandibular\n+      - Supraclavicular\n+      - Supraclavicular/Axillary Level 3\n+      - Thorax\n+      - Trunk\n+      - Unknown\n+      - Not Reported\n+      - Not Allowed To Collect\n \n   treatment_intent_type:\n     term:\n       $ref: \"_terms.yaml#/treatment_intent_type\"\n     type: string\n \n-  therapeutic_agents:\n+  treatment_or_therapy:\n     term:\n-      $ref: \"_terms.yaml#/therapeutic_agents\"\n-    type: string\n+      $ref: \"_terms.yaml#/treatment_or_therapy\"\n+    enum:\n+      - \"yes\"","path":"gdcdictionary/schemas/treatment.yaml","position":133,"original_position":133,"commit_id":"3c0c9ee0fb6b171dc23578996646292d0e458b31","original_commit_id":"3c0c9ee0fb6b171dc23578996646292d0e458b31","user":{"login":"allisonheath","id":2213854,"avatar_url":"https://avatars.githubusercontent.com/u/2213854?v=3","gravatar_id":"","url":"https://api.github.com/users/allisonheath","html_url":"https://github.com/allisonheath","followers_url":"https://api.github.com/users/allisonheath/followers","following_url":"https://api.github.com/users/allisonheath/following{/other_user}","gists_url":"https://api.github.com/users/allisonheath/gists{/gist_id}","starred_url":"https://api.github.com/users/allisonheath/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/allisonheath/subscriptions","organizations_url":"https://api.github.com/users/allisonheath/orgs","repos_url":"https://api.github.com/users/allisonheath/repos","events_url":"https://api.github.com/users/allisonheath/events{/privacy}","received_events_url":"https://api.github.com/users/allisonheath/received_events","type":"User","site_admin":false},"body":"Quotes?","created_at":"2016-12-02T20:42:08Z","updated_at":"2016-12-02T20:42:08Z","html_url":"https://github.com/NCI-GDC/gdcdictionary/pull/161#discussion_r90716112","pull_request_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/161","_links":{"self":{"href":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/comments/90716112"},"html":{"href":"https://github.com/NCI-GDC/gdcdictionary/pull/161#discussion_r90716112"},"pull_request":{"href":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/161"}}},"pull_request":{"url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/161","id":83166270,"html_url":"https://github.com/NCI-GDC/gdcdictionary/pull/161","diff_url":"https://github.com/NCI-GDC/gdcdictionary/pull/161.diff","patch_url":"https://github.com/NCI-GDC/gdcdictionary/pull/161.patch","issue_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/issues/161","number":161,"state":"open","locked":false,"title":"DM-18 feat(BLGSP/CPTAC): added new BLGSP/CPTAC properties and terms","user":{"login":"dmiller15","id":12803775,"avatar_url":"https://avatars.githubusercontent.com/u/12803775?v=3","gravatar_id":"","url":"https://api.github.com/users/dmiller15","html_url":"https://github.com/dmiller15","followers_url":"https://api.github.com/users/dmiller15/followers","following_url":"https://api.github.com/users/dmiller15/following{/other_user}","gists_url":"https://api.github.com/users/dmiller15/gists{/gist_id}","starred_url":"https://api.github.com/users/dmiller15/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dmiller15/subscriptions","organizations_url":"https://api.github.com/users/dmiller15/orgs","repos_url":"https://api.github.com/users/dmiller15/repos","events_url":"https://api.github.com/users/dmiller15/events{/privacy}","received_events_url":"https://api.github.com/users/dmiller15/received_events","type":"User","site_admin":false},"body":"r? @allisonheath @millerjs @msfitzsimons @tlicht3 \n\nLots of changes. Also started ordering properties alphabetically as it has been getting progressively harder to find them with the large enums we have started using.\n\nIncludes changes from following tickets:\nhttps://jira.opensciencedatacloud.org/browse/DAT-31\nhttps://jira.opensciencedatacloud.org/browse/DM-18\n","created_at":"2016-08-29T20:56:38Z","updated_at":"2016-12-02T20:45:08Z","closed_at":null,"merged_at":null,"merge_commit_sha":"67703286bd99a3be31ef1af18a6fc9e3dd60b04f","assignee":null,"assignees":[],"milestone":null,"commits_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/161/commits","review_comments_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/161/comments","review_comment_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/comments{/number}","comments_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/issues/161/comments","statuses_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/statuses/3c0c9ee0fb6b171dc23578996646292d0e458b31","head":{"label":"NCI-GDC:feat/new-blgsp-properties","ref":"feat/new-blgsp-properties","sha":"3c0c9ee0fb6b171dc23578996646292d0e458b31","user":{"login":"NCI-GDC","id":7882952,"avatar_url":"https://avatars.githubusercontent.com/u/7882952?v=3","gravatar_id":"","url":"https://api.github.com/users/NCI-GDC","html_url":"https://github.com/NCI-GDC","followers_url":"https://api.github.com/users/NCI-GDC/followers","following_url":"https://api.github.com/users/NCI-GDC/following{/other_user}","gists_url":"https://api.github.com/users/NCI-GDC/gists{/gist_id}","starred_url":"https://api.github.com/users/NCI-GDC/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/NCI-GDC/subscriptions","organizations_url":"https://api.github.com/users/NCI-GDC/orgs","repos_url":"https://api.github.com/users/NCI-GDC/repos","events_url":"https://api.github.com/users/NCI-GDC/events{/privacy}","received_events_url":"https://api.github.com/users/NCI-GDC/received_events","type":"Organization","site_admin":false},"repo":{"id":39018009,"name":"gdcdictionary","full_name":"NCI-GDC/gdcdictionary","owner":{"login":"NCI-GDC","id":7882952,"avatar_url":"https://avatars.githubusercontent.com/u/7882952?v=3","gravatar_id":"","url":"https://api.github.com/users/NCI-GDC","html_url":"https://github.com/NCI-GDC","followers_url":"https://api.github.com/users/NCI-GDC/followers","following_url":"https://api.github.com/users/NCI-GDC/following{/other_user}","gists_url":"https://api.github.com/users/NCI-GDC/gists{/gist_id}","starred_url":"https://api.github.com/users/NCI-GDC/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/NCI-GDC/subscriptions","organizations_url":"https://api.github.com/users/NCI-GDC/orgs","repos_url":"https://api.github.com/users/NCI-GDC/repos","events_url":"https://api.github.com/users/NCI-GDC/events{/privacy}","received_events_url":"https://api.github.com/users/NCI-GDC/received_events","type":"Organization","site_admin":false},"private":false,"html_url":"https://github.com/NCI-GDC/gdcdictionary","description":"Data dictionary for the GDC","fork":false,"url":"https://api.github.com/repos/NCI-GDC/gdcdictionary","forks_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/forks","keys_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/keys{/key_id}","collaborators_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/teams","hooks_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/hooks","issue_events_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/issues/events{/number}","events_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/events","assignees_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/assignees{/user}","branches_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/branches{/branch}","tags_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/tags","blobs_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/git/refs{/sha}","trees_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/git/trees{/sha}","statuses_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/statuses/{sha}","languages_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/languages","stargazers_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/stargazers","contributors_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/contributors","subscribers_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/subscribers","subscription_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/subscription","commits_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/commits{/sha}","git_commits_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/git/commits{/sha}","comments_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/comments{/number}","issue_comment_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/issues/comments{/number}","contents_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/contents/{+path}","compare_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/compare/{base}...{head}","merges_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/merges","archive_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/downloads","issues_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/issues{/number}","pulls_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls{/number}","milestones_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/milestones{/number}","notifications_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/labels{/name}","releases_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/releases{/id}","deployments_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/deployments","created_at":"2015-07-13T14:45:06Z","updated_at":"2016-10-29T00:30:35Z","pushed_at":"2016-11-29T22:45:26Z","git_url":"git://github.com/NCI-GDC/gdcdictionary.git","ssh_url":"git@github.com:NCI-GDC/gdcdictionary.git","clone_url":"https://github.com/NCI-GDC/gdcdictionary.git","svn_url":"https://github.com/NCI-GDC/gdcdictionary","homepage":"https://gdc-docs.nci.nih.gov/Data_Dictionary/viewer/","size":731,"stargazers_count":3,"watchers_count":3,"language":"Python","has_issues":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":4,"mirror_url":null,"open_issues_count":21,"forks":4,"open_issues":21,"watchers":3,"default_branch":"develop"}},"base":{"label":"NCI-GDC:develop","ref":"develop","sha":"570f49c0eb42c7198f4f3baa10b4c4ec83590768","user":{"login":"NCI-GDC","id":7882952,"avatar_url":"https://avatars.githubusercontent.com/u/7882952?v=3","gravatar_id":"","url":"https://api.github.com/users/NCI-GDC","html_url":"https://github.com/NCI-GDC","followers_url":"https://api.github.com/users/NCI-GDC/followers","following_url":"https://api.github.com/users/NCI-GDC/following{/other_user}","gists_url":"https://api.github.com/users/NCI-GDC/gists{/gist_id}","starred_url":"https://api.github.com/users/NCI-GDC/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/NCI-GDC/subscriptions","organizations_url":"https://api.github.com/users/NCI-GDC/orgs","repos_url":"https://api.github.com/users/NCI-GDC/repos","events_url":"https://api.github.com/users/NCI-GDC/events{/privacy}","received_events_url":"https://api.github.com/users/NCI-GDC/received_events","type":"Organization","site_admin":false},"repo":{"id":39018009,"name":"gdcdictionary","full_name":"NCI-GDC/gdcdictionary","owner":{"login":"NCI-GDC","id":7882952,"avatar_url":"https://avatars.githubusercontent.com/u/7882952?v=3","gravatar_id":"","url":"https://api.github.com/users/NCI-GDC","html_url":"https://github.com/NCI-GDC","followers_url":"https://api.github.com/users/NCI-GDC/followers","following_url":"https://api.github.com/users/NCI-GDC/following{/other_user}","gists_url":"https://api.github.com/users/NCI-GDC/gists{/gist_id}","starred_url":"https://api.github.com/users/NCI-GDC/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/NCI-GDC/subscriptions","organizations_url":"https://api.github.com/users/NCI-GDC/orgs","repos_url":"https://api.github.com/users/NCI-GDC/repos","events_url":"https://api.github.com/users/NCI-GDC/events{/privacy}","received_events_url":"https://api.github.com/users/NCI-GDC/received_events","type":"Organization","site_admin":false},"private":false,"html_url":"https://github.com/NCI-GDC/gdcdictionary","description":"Data dictionary for the GDC","fork":false,"url":"https://api.github.com/repos/NCI-GDC/gdcdictionary","forks_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/forks","keys_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/keys{/key_id}","collaborators_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/teams","hooks_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/hooks","issue_events_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/issues/events{/number}","events_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/events","assignees_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/assignees{/user}","branches_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/branches{/branch}","tags_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/tags","blobs_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/git/refs{/sha}","trees_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/git/trees{/sha}","statuses_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/statuses/{sha}","languages_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/languages","stargazers_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/stargazers","contributors_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/contributors","subscribers_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/subscribers","subscription_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/subscription","commits_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/commits{/sha}","git_commits_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/git/commits{/sha}","comments_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/comments{/number}","issue_comment_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/issues/comments{/number}","contents_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/contents/{+path}","compare_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/compare/{base}...{head}","merges_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/merges","archive_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/downloads","issues_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/issues{/number}","pulls_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls{/number}","milestones_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/milestones{/number}","notifications_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/labels{/name}","releases_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/releases{/id}","deployments_url":"https://api.github.com/repos/NCI-GDC/gdcdictionary/deployments","created_at":"2015-07-13T14:45:06Z","updated_at":"2016-10-29T00:30:35Z","pushed_at":"2016-11-29T22:45:26Z","git_url":"git://github.com/NCI-GDC/gdcdictionary.git","ssh_url":"git@github.com:NCI-GDC/gdcdictionary.git","clone_url":"https://github.com/NCI-GDC/gdcdictionary.git","svn_url":"https://github.com/NCI-GDC/gdcdictionary","homepage":"https://gdc-docs.nci.nih.gov/Data_Dictionary/viewer/","size":731,"stargazers_count":3,"watchers_count":3,"language":"Python","has_issues":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":4,"mirror_url":null,"open_issues_count":21,"forks":4,"open_issues":21,"watchers":3,"default_branch":"develop"}},"_links":{"self":{"href":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/161"},"html":{"href":"https://github.com/NCI-GDC/gdcdictionary/pull/161"},"issue":{"href":"https://api.github.com/repos/NCI-GDC/gdcdictionary/issues/161"},"comments":{"href":"https://api.github.com/repos/NCI-GDC/gdcdictionary/issues/161/comments"},"review_comments":{"href":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/161/comments"},"review_comment":{"href":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/comments{/number}"},"commits":{"href":"https://api.github.com/repos/NCI-GDC/gdcdictionary/pulls/161/commits"},"statuses":{"href":"https://api.github.com/repos/NCI-GDC/gdcdictionary/statuses/3c0c9ee0fb6b171dc23578996646292d0e458b31"}}}}
{"actor":{"display_login":"allisonheath"}}