{"action":"created","issue":{"url":"https://api.github.com/repos/OpenTreeOfLife/opentree/issues/935","repository_url":"https://api.github.com/repos/OpenTreeOfLife/opentree","labels_url":"https://api.github.com/repos/OpenTreeOfLife/opentree/issues/935/labels{/name}","comments_url":"https://api.github.com/repos/OpenTreeOfLife/opentree/issues/935/comments","events_url":"https://api.github.com/repos/OpenTreeOfLife/opentree/issues/935/events","html_url":"https://github.com/OpenTreeOfLife/opentree/issues/935","id":136821107,"number":935,"title":"Bug in conflict service.","user":{"login":"bredelings","id":140268,"avatar_url":"https://avatars.githubusercontent.com/u/140268?v=3","gravatar_id":"","url":"https://api.github.com/users/bredelings","html_url":"https://github.com/bredelings","followers_url":"https://api.github.com/users/bredelings/followers","following_url":"https://api.github.com/users/bredelings/following{/other_user}","gists_url":"https://api.github.com/users/bredelings/gists{/gist_id}","starred_url":"https://api.github.com/users/bredelings/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bredelings/subscriptions","organizations_url":"https://api.github.com/users/bredelings/orgs","repos_url":"https://api.github.com/users/bredelings/repos","events_url":"https://api.github.com/users/bredelings/events{/privacy}","received_events_url":"https://api.github.com/users/bredelings/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":{"login":"jar398","id":2035858,"avatar_url":"https://avatars.githubusercontent.com/u/2035858?v=3","gravatar_id":"","url":"https://api.github.com/users/jar398","html_url":"https://github.com/jar398","followers_url":"https://api.github.com/users/jar398/followers","following_url":"https://api.github.com/users/jar398/following{/other_user}","gists_url":"https://api.github.com/users/jar398/gists{/gist_id}","starred_url":"https://api.github.com/users/jar398/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jar398/subscriptions","organizations_url":"https://api.github.com/users/jar398/orgs","repos_url":"https://api.github.com/users/jar398/repos","events_url":"https://api.github.com/users/jar398/events{/privacy}","received_events_url":"https://api.github.com/users/jar398/received_events","type":"User","site_admin":false},"milestone":null,"comments":10,"created_at":"2016-02-26T21:38:50Z","updated_at":"2016-05-10T17:41:17Z","closed_at":"2016-05-10T17:41:17Z","body":"On pg_2448, node900303 has 2 children: Clostridium phytofermentans and Abiotrophia defectiva\r\nThe edge is marked as Resolves Firmicutes in the conflict with the taxonomy tree.\r\n\r\nlife > cellular organisms > Bacteria > Firmicutes > Clostridia > Clostridiales > Lachnospiraceae > Anaerosporobacter > Lachnoclostridium phytofermentans\r\n\r\nlife > cellular organisms > Bacteria > Firmicutes > Bacilli > Lactobacillales > Aerococcaceae > Abiotrophia > Abiotrophia defectiva (species ncbi:46125)\r\n\r\nSo, I think this node should conflict with all the above-mentioned on the ancestry chain up to, but not including, Firmicutes."},"comment":{"url":"https://api.github.com/repos/OpenTreeOfLife/opentree/issues/comments/218234096","html_url":"https://github.com/OpenTreeOfLife/opentree/issues/935#issuecomment-218234096","issue_url":"https://api.github.com/repos/OpenTreeOfLife/opentree/issues/935","id":218234096,"user":{"login":"jar398","id":2035858,"avatar_url":"https://avatars.githubusercontent.com/u/2035858?v=3","gravatar_id":"","url":"https://api.github.com/users/jar398","html_url":"https://github.com/jar398","followers_url":"https://api.github.com/users/jar398/followers","following_url":"https://api.github.com/users/jar398/following{/other_user}","gists_url":"https://api.github.com/users/jar398/gists{/gist_id}","starred_url":"https://api.github.com/users/jar398/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jar398/subscriptions","organizations_url":"https://api.github.com/users/jar398/orgs","repos_url":"https://api.github.com/users/jar398/repos","events_url":"https://api.github.com/users/jar398/events{/privacy}","received_events_url":"https://api.github.com/users/jar398/received_events","type":"User","site_admin":false},"created_at":"2016-05-10T17:41:17Z","updated_at":"2016-05-10T17:41:17Z","body":"Can't see any other actions to take, so closing"}}