{"action":"created","issue":{"url":"https://api.github.com/repos/nipy/nipype/issues/1594","repository_url":"https://api.github.com/repos/nipy/nipype","labels_url":"https://api.github.com/repos/nipy/nipype/issues/1594/labels{/name}","comments_url":"https://api.github.com/repos/nipy/nipype/issues/1594/comments","events_url":"https://api.github.com/repos/nipy/nipype/issues/1594/events","html_url":"https://github.com/nipy/nipype/issues/1594","id":173830833,"number":1594,"title":"New CompCor interface","user":{"login":"oesteban","id":598470,"avatar_url":"https://avatars.githubusercontent.com/u/598470?v=3","gravatar_id":"","url":"https://api.github.com/users/oesteban","html_url":"https://github.com/oesteban","followers_url":"https://api.github.com/users/oesteban/followers","following_url":"https://api.github.com/users/oesteban/following{/other_user}","gists_url":"https://api.github.com/users/oesteban/gists{/gist_id}","starred_url":"https://api.github.com/users/oesteban/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/oesteban/subscriptions","organizations_url":"https://api.github.com/users/oesteban/orgs","repos_url":"https://api.github.com/users/oesteban/repos","events_url":"https://api.github.com/users/oesteban/events{/privacy}","received_events_url":"https://api.github.com/users/oesteban/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"oesteban","id":598470,"avatar_url":"https://avatars.githubusercontent.com/u/598470?v=3","gravatar_id":"","url":"https://api.github.com/users/oesteban","html_url":"https://github.com/oesteban","followers_url":"https://api.github.com/users/oesteban/followers","following_url":"https://api.github.com/users/oesteban/following{/other_user}","gists_url":"https://api.github.com/users/oesteban/gists{/gist_id}","starred_url":"https://api.github.com/users/oesteban/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/oesteban/subscriptions","organizations_url":"https://api.github.com/users/oesteban/orgs","repos_url":"https://api.github.com/users/oesteban/repos","events_url":"https://api.github.com/users/oesteban/events{/privacy}","received_events_url":"https://api.github.com/users/oesteban/received_events","type":"User","site_admin":false},"assignees":[{"login":"oesteban","id":598470,"avatar_url":"https://avatars.githubusercontent.com/u/598470?v=3","gravatar_id":"","url":"https://api.github.com/users/oesteban","html_url":"https://github.com/oesteban","followers_url":"https://api.github.com/users/oesteban/followers","following_url":"https://api.github.com/users/oesteban/following{/other_user}","gists_url":"https://api.github.com/users/oesteban/gists{/gist_id}","starred_url":"https://api.github.com/users/oesteban/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/oesteban/subscriptions","organizations_url":"https://api.github.com/users/oesteban/orgs","repos_url":"https://api.github.com/users/oesteban/repos","events_url":"https://api.github.com/users/oesteban/events{/privacy}","received_events_url":"https://api.github.com/users/oesteban/received_events","type":"User","site_admin":false},{"login":"shoshber","id":1402948,"avatar_url":"https://avatars.githubusercontent.com/u/1402948?v=3","gravatar_id":"","url":"https://api.github.com/users/shoshber","html_url":"https://github.com/shoshber","followers_url":"https://api.github.com/users/shoshber/followers","following_url":"https://api.github.com/users/shoshber/following{/other_user}","gists_url":"https://api.github.com/users/shoshber/gists{/gist_id}","starred_url":"https://api.github.com/users/shoshber/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/shoshber/subscriptions","organizations_url":"https://api.github.com/users/shoshber/orgs","repos_url":"https://api.github.com/users/shoshber/repos","events_url":"https://api.github.com/users/shoshber/events{/privacy}","received_events_url":"https://api.github.com/users/shoshber/received_events","type":"User","site_admin":false}],"milestone":null,"comments":9,"created_at":"2016-08-29T17:47:53Z","updated_at":"2016-09-07T06:24:17Z","closed_at":null,"body":"Create a new interface (under algorithm.misc ?) for the calculation of the [Component Based Noise Correction Method (CompCor)](http://dx.doi.org/10.1016%2Fj.neuroimage.2007.04.042) on r-fMRI.\r\n\r\nThe code is already here in nipype: \r\n  - https://github.com/nipy/nipype/blob/master/nipype/workflows/rsfmri/fsl/resting.py\r\n  -  https://github.com/nipy/nipype/blob/c389d5d4c0f1eb5ff321de5553f815d1fb6fcc47/examples/rsfmri_vol_surface_preprocessing_nipy.py\r\n\r\nSo this issue would include updating both workflow and example to use the new interface.\r\n\r\n- [x] implement\r\n   - [x] CompCor\r\n      - [x] remove regression residuals\r\n   - [x] tCompCor\r\n   - [x] aCompcor alias\r\n- [ ] use interface in https://github.com/nipy/nipype/blob/master/nipype/workflows/rsfmri/fsl/resting.py\r\n- [ ] use interface in https://github.com/nipy/nipype/blob/c389d5d4c0f1eb5ff321de5553f815d1fb6fcc47/examples/rsfmri_vol_surface_preprocessing_nipy.py"},"comment":{"url":"https://api.github.com/repos/nipy/nipype/issues/comments/245186668","html_url":"https://github.com/nipy/nipype/issues/1594#issuecomment-245186668","issue_url":"https://api.github.com/repos/nipy/nipype/issues/1594","id":245186668,"user":{"login":"shoshber","id":1402948,"avatar_url":"https://avatars.githubusercontent.com/u/1402948?v=3","gravatar_id":"","url":"https://api.github.com/users/shoshber","html_url":"https://github.com/shoshber","followers_url":"https://api.github.com/users/shoshber/followers","following_url":"https://api.github.com/users/shoshber/following{/other_user}","gists_url":"https://api.github.com/users/shoshber/gists{/gist_id}","starred_url":"https://api.github.com/users/shoshber/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/shoshber/subscriptions","organizations_url":"https://api.github.com/users/shoshber/orgs","repos_url":"https://api.github.com/users/shoshber/repos","events_url":"https://api.github.com/users/shoshber/events{/privacy}","received_events_url":"https://api.github.com/users/shoshber/received_events","type":"User","site_admin":false},"created_at":"2016-09-07T06:24:17Z","updated_at":"2016-09-07T06:24:17Z","body":"ok, I will assume it is already done"}}
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