{"action":"created","issue":{"url":"https://api.github.com/repos/pombase/curation/issues/880","repository_url":"https://api.github.com/repos/pombase/curation","labels_url":"https://api.github.com/repos/pombase/curation/issues/880/labels{/name}","comments_url":"https://api.github.com/repos/pombase/curation/issues/880/comments","events_url":"https://api.github.com/repos/pombase/curation/issues/880/events","html_url":"https://github.com/pombase/curation/issues/880","id":144898885,"number":880,"title":"mst2","user":{"login":"ValWood","id":7359272,"avatar_url":"https://avatars.githubusercontent.com/u/7359272?v=3","gravatar_id":"","url":"https://api.github.com/users/ValWood","html_url":"https://github.com/ValWood","followers_url":"https://api.github.com/users/ValWood/followers","following_url":"https://api.github.com/users/ValWood/following{/other_user}","gists_url":"https://api.github.com/users/ValWood/gists{/gist_id}","starred_url":"https://api.github.com/users/ValWood/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ValWood/subscriptions","organizations_url":"https://api.github.com/users/ValWood/orgs","repos_url":"https://api.github.com/users/ValWood/repos","events_url":"https://api.github.com/users/ValWood/events{/privacy}","received_events_url":"https://api.github.com/users/ValWood/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/pombase/curation/labels/discuss","name":"discuss","color":"fbca04"},{"url":"https://api.github.com/repos/pombase/curation/labels/waiting%20for%20feedback","name":"waiting for feedback","color":"d4c5f9"}],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":3,"created_at":"2016-03-31T13:17:12Z","updated_at":"2016-04-26T11:06:59Z","closed_at":null,"body":"\r\nfigure out why this no longer has histone aceylation:\r\nhttp://www.pombase.org/spombe/result/SPAC17G8.13c"},"comment":{"url":"https://api.github.com/repos/pombase/curation/issues/comments/214704286","html_url":"https://github.com/pombase/curation/issues/880#issuecomment-214704286","issue_url":"https://api.github.com/repos/pombase/curation/issues/880","id":214704286,"user":{"login":"ValWood","id":7359272,"avatar_url":"https://avatars.githubusercontent.com/u/7359272?v=3","gravatar_id":"","url":"https://api.github.com/users/ValWood","html_url":"https://github.com/ValWood","followers_url":"https://api.github.com/users/ValWood/followers","following_url":"https://api.github.com/users/ValWood/following{/other_user}","gists_url":"https://api.github.com/users/ValWood/gists{/gist_id}","starred_url":"https://api.github.com/users/ValWood/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ValWood/subscriptions","organizations_url":"https://api.github.com/users/ValWood/orgs","repos_url":"https://api.github.com/users/ValWood/repos","events_url":"https://api.github.com/users/ValWood/events{/privacy}","received_events_url":"https://api.github.com/users/ValWood/received_events","type":"User","site_admin":false},"created_at":"2016-04-26T11:06:59Z","updated_at":"2016-04-26T11:06:59Z","body":"I don't think that it matters  if we don't 'display' these on our gene pages (this is like the phosphorylation discussion this week with @AntoniaLock). I  can even filter those from external sources  so that they don't appear explicitly on the gene pages (to a gene page user its obvious that a histone acetylase is involved in histone acetylation so this is redundant information).  For this reason I exclude 'protein modification' terms from the slim, as they aren't really providing useful information about the biological role. However, they should still exist  behind the scenes for enrichment purposes so we need to make sure the F-P link comes back.\r\n\r\nWe only need to make explicit annotations to modifications when we have information for extensions which we can't put on the MF.\r\nWe should also make explicit annotation for other processes (like transmembrane transport).\r\ni'll put a \"discuss label\" on this ticket to go through this. It might not be clear....\r\n\r\n"}}