3.7.2. Hydrogen bond analysis of PPARγ complexes
Numerous hydrogen bonds were found throughout the simulation of the Raltitrexed-PPARγ complex. Residues of PPARγ: Lys59, Arg82, Ser136, and Glu137 were involved in strong hydrogen bonding and were consistent while other residues forming hydrogen bonds were seen on and off throughout the simulation with Raltitrexed (