2.5 Statistical analysis
Full, reproducible R code for all analyses detailed below can be accessed from GitHub (For qualitative ELISA results, we determined positivity / negativity according to the manufacturer’s guidelines.To compare qPCR CWithin-subject repeated measures Pearson correlation coefficient was calculated using the R package rmcorr v.0.3.1 [Statistical analyses were conducted using Microsoft Excel 2013 and R v4.0.2 [