FFT induces an antagonistic phage-microbe interaction
Intrigued by the presence of differentially abundant VPs two days after FFT, we determined whether the dynamics between phages and their microbial hosts had changed. For this, we linked VPs to metagenome-assembled genomes (MAGs) from our WGS sequencing dataset and calculated the mean abundance change for all VP-MAG pairs belonging to a given species in a given sample. This showed opposing relationships between MAG and VP abundance in the first two days of the intervention (Fig. 