Contributors
MH, CF, TG, DJD
CF, DNB, HA, MSC, MS, OR, RH, SHE, and SF conceptualised the study. AS, CF, DJD, and TG curated the data. CF, DB, MH, TG, WP, and NO conducted the formal analysis. CF, DNB, HA, MSC, OR, RH, and SF acquired the funding. DB, GM-C, and MdC processed and sequenced the viral samples. DB, MH, and TG designed the methodology. ABC, BK, CF, DB, EP-M, LA-D, ML, SHE, and SF were responsible for project administration. DB, MH, and TG wrote and used software to conduct the analysis. CF and HA supervised the study. HA and MS disseminated the findings. MH designed the figures. CF, LA-D, and MH wrote the original draft of the manuscript. BK, DB, DNB, MSC, ML, RH, SHE, SF, and TG reviewed and edited the manuscript. MH and TG accessed and verified the raw genomic data, and MH and WP the raw PopART-IBM data. All authors had full access to all the data in the study and had final responsibility for the decision to submit for publication.