Jones was joined by more experienced defenders for the 2006–07 season: ex-Aston Villa player Neil Cox and former Notts County centre-half Julien Baudet. Jones played his 100th league game for the club ten games into the season against Millwall.
Jones's 100th league appearance for the club occurred during the first ten games of the 2006–07 season, a significant achievement that was marked by his partnership with experienced defenders Neil Cox and Julien Baudet.