Morrelganj Upazila is divided into Morrelganj Municipality and 16 union parishads: Baharbunia, Balaibunia, Banagram, Baraikhali, Chingrakhali, Daibagnyahati, Hoglabunia, Hogla Pasha, Jiudhara, Khuolia, Morrelganj, Nishanbaria, Panchakaran, Putikhali, Ramchandrapur, and Teligati.
Morrelganj Upazila is composed of Morrelganj Municipality and 16 local government areas: Baharbunia, Balaibunia, Banagram, Baraikhali, Chingrakhali, Daibagnyahati, Hoglabunia, Hogla Pasha, Jiudhara, Khuolia, Morrelganj, Nishanbaria, Panchakaran, Putikhali, Ramchandrapur, and Teligati.