The rumor, however, of a fall out with manager McGrath only increased with Thomas being dropped several times during the season to be replaced by the likes of Nigel Jemson, Frank Worthington and Steve Taylor. He did though every time regain his place in the team, ending the season with an excellent 28 goals.
The rumor of a disagreement between Thomas and manager McGrath grew as Thomas was repeatedly replaced during the season in favor of other players, but he consistently regained his position on the team and ended up with an impressive goal tally.