Khoksa Upazila is divided into Khoksa Municipality and nine union parishads: Ambaria, Betbaria, Gopagram, Janipur, Jayanti, Khoksa, Osmanpur, Samaspur, and Shimulia.
The area of Khoksa Upazila is partitioned into the municipality of Khoksa and nine local councils: Ambaria, Betbaria, Gopagram, Janipur, Jayanti, Khoksa, Osmanpur, Samaspur, and Shimulia.