

def _get_system_config(systemconfig, datadir):
    'Retrieve a system configuration with galaxy references specified.\n    '
    f = _get_system_configfile(systemconfig, datadir)
    with open(f) as in_handle:
        config = yaml.load(in_handle)
    if ('galaxy_config' not in config):
        config['galaxy_config'] = os.path.join(os.path.dirname(f), 'universe_wsgi.ini')
    return f

dataset/ETHPy150Open chapmanb/bcbio-nextgen-vm/bcbiovm/docker/run.py _get_system_config/VarMisuse@78/130 `config`->`f`