At the northern Cascadia subduction zone, the subducting Explorer and Juan de Fuca plates interact across a transform deformation zone, known as the Nootka fault zone (NFZ). This study continues the Seafloor Earthquake Array Japan Canada Cascadia Experiment to a second phase (SeaJade II) consisting of nine months of recording of earthquakes using ocean-bottom and land-based seismometers. In addition to mapping the distribution of seismicity, including an MW6.4 earthquake and aftershocks along the previously unknown Nootka Sequence Fault, we also conducted seismic tomography, which delineates the geometry of the shallow subducting Explorer plate (ExP). We derived hundreds of high-quality focal mechanism solutions from the SeaJade II data. The mechanisms manifest a complex regional tectonic state, with normal faulting of the ExP west of the NFZ, left-lateral strike-slip behaviour of the NFZ, and reverse faulting within the overriding plate above the subducting Juan de Fuca plate. Using data from the combined SeaJade I and II catalogs, we have performed double-difference hypocentre relocations and found seismicity lineations to the southeast of, and oriented 18° clockwise from, the subducted NFZ, which we interpret to represent less active small faults off the primary faults of the NFZ. These lineations are not optimally oriented for shear failure in the regional stress field, which we inferred from averaged focal mechanism solutions, and may represent paleo-configurations of the NFZ. Further, active faults interpreted from seismicity lineations within the subducted plate, including the Nootka Sequence Fault, may have originated as conjugate faults within the paleo-NFZ.