Korean water deer (Hydropotes inermis argyropus; Heude, 1884) and Siberian roe deer (Capreolus pygargus; Pallas, 1771) are Korean wild deer classified in the tribe Capreolini.C. pygargusin Korea were previously considered a single species; however, it was recently suggested that roe deer living on Jeju Island (Jeju roe deer;Capreolus pygargus jejuensis) is a distinct subspecies from roe deer living on the Korean peninsula (mainland roe deer;Capreolus pygargus tianschanicus) based on several studies demonstrating genetic and morphological features. In this study, we suggests that the scapular morphology and osteometric data can be used for interspecies discrmination between Korean wild deer. To compare the morphological characteristics of scapula among the three groups of deer, we analyzed the features and nine osteomorphological measurements of 31H. i. argyropus(14 males and 17 females), 18C. p. jejuensis(4 males and 14 females), and 23C. p. tianschanicus(16 females and 7 males). The estimated ages of the deer were over 32–35 months. Data were analyzed by one-way repeated measures analysis of variance with post hoc Duncan test and discriminant functional analysis (DFA).H. i. argyropusandC. p. tianschanicushad the smallest and largest scapulae, respectively. The scapulae of the three Korean wild deer had a similar triangular shape, which was obscured by the tuber of the scapular spine, pointed acromion, broad infraspinous fossa, narrow supraspinous fossa, and partial ossification of scapular cartilage in older deer.H. i. argyropushad certain distinctive features, including a caudally pointed acromion, a notch between the supraglenoid tubercle and glenoid cavity (NBSG), a glenoid notch, and no sexual dimorphism, except for the longest dorsal length (Ld) and the scapular index (SI).C. p. jejuensishad a larger scapular index (SI) (61.74 ± 0.74%), compared with the SIs ofH. i. argyropusandC. p. tianschanicus. The unique features of the scapula inC. p. jejuensisinclude its S-shaped cranial border. TheC. p. jejuensishad a cranially pointed acromion, less frequent presence of glenoid notch and NBSG, short length of supraglenoid tubercle, and no sexual dimorphism. TheC. p. tianschanicushad elevated cranial margin of the glenoid cavity, and frequent presence of glenoid notch and NBSG, similar to theH. i. argyropus. Similar toC. p. jejuensis,C. p. tianschanicushad a cranially pointed acromion. However, sexual dimorphism was observed inC. p. tianschanicus. DFA using osteometric data showed 97.22% of specimens were classified correctly into their species, meaning the osteometric parameters can be used for interspecies discrimination of Korean wild deer. Our findings indicate that the scapular morphologies of the three Korean wild deer have certain similarities and differences, suggesting thatC. p. jejuensisare distinct fromC. p. tianschanicus.