Currently, 50% of Irish rivers do not meet water quality standards, with many declining due to numerous pressures, including peatland degradation. This study examines stream water quality in the Irish midlands, a region where raised bogs have been all historically disturbed to various extent and the majority drained for industrial or domestic peat extraction. For the first time, we provide in-depth analysis of stream water chemistry within a heavily modified bog landscape. Small streams from degraded bogs exhibited greater levels of pollutants, in particular: total dissolved nitrogen (0.48 mg/l) and sulphate (18.49 mg/l) as well as higher electrical conductivity (mean: 334 μS/cm) compared to similar bog streams in near-natural bogs. Except for site-specific nitrogen pollution in certain streams surrounding degraded peatlands, the chemical composition of the receiving streams did not significantly differ between near-natural and degraded sites, reflecting the spatio-temporal scales of disturbance in this complex peat-scape. Dissolved organic carbon concentrations in all the receiving streams were high (27.2 mg/l) compared to other Irish streams, even within other peatland catchments. The region is experiencing overall a widespread loss of fluvial nitrogen and carbon calling for (a) the development of management instruments at site-level (water treatment) and landscape-level (rewetting) to assist with meeting water quality standards in the region, and (b) the routine monitoring of water chemistry as part of current and future peatland management activities.Supplementary InformationThe online version contains supplementary material available at 10.1007/s10750-023-05188-5.