We discuss the design, development, and evaluation of
an Orbitrap/time-of-flight
(TOF) mass spectrometry (MS)-based instrument with integrated UV photodissociation
(UVPD) and time/mass-to-charge ratio (m/z)-resolved imaging for the comprehensive study of the higher-order
molecular structure of macromolecular assemblies (MMAs). A bespoke
TOF analyzer has been coupled to the higher-energy collisional dissociation
cell of an ultrahigh mass range hybrid quadrupole-Orbitrap MS. A 193
nm excimer laser was employed to photofragment MMA ions. A combination
of microchannel plates (MCPs)-Timepix (TPX) quad and MCPs-phosphor
screen-TPX3CAM assemblies have been used as axial and orthogonal imaging
detectors, respectively. The instrument can operate in four different
modes, where the UVPD-generated fragment ions from the native MMA
ions can be measured with high-mass resolution or imaged in a mass-resolved
manner to reveal the relative positions of the UVPD fragments postdissociation.
This information is intended to be utilized for retrieving higher-order
molecular structural details that include the conformation, subunit
stoichiometry, and molecular interactions as well as to understand
the dissociation dynamics of the MMAs in the gas phase.