Extraction and classification of three cortical neuron types (Mensi et al. 2012)

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1 . Mensi S, Naud R, Pozzorini C, Avermann M, Petersen CC, Gerstner W (2012) Parameter extraction and classification of three cortical neuron types reveals two distinct adaptation mechanisms. J Neurophysiol 107:1756-75 [PubMed]
Model Type: Neuron or other electrically excitable cell;
Brain Region(s)/Organism: Neocortex;
Cell Type(s): Hippocampus CA1 pyramidal cell; Hippocampus CA3 pyramidal cell; Neocortex fast spiking (FS) interneuron; Neocortex spiking regular (RS) neuron;
Gap Junctions:
Simulation Environment: MATLAB;
Model Concept(s):
Search NeuronDB for information about:  Hippocampus CA1 pyramidal cell; Hippocampus CA3 pyramidal cell;
function [output] = Extract_interval(input,spiketimes,dt)
%   Remove the spikes from the data
%   input = vector of real value (i.e. current or voltage)
%   spiketimes = index of the spikes
%   dt = period of time that are removed following each spikes

    output = input;
    output = input(1:spiketimes(1));
    for i=1:length(spiketimes)-1
        if(spiketimes(i) + dt <= spiketimes(i+1))
            output = [output;input(spiketimes(i)+dt:spiketimes(i+1))];

    output = [output;input(spiketimes(end)+dt:end)];


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