Difference between revisions of "Table"

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(Basic info)
(Basic info)
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=== Basic info ===
=== Basic info ===
[ http://{{SERVERNAME}}/w/doc/dynamo_table_info.html <tt>dtinfo</tt>]
<tt>dinfo table </tt> just plots on screen a summary of the contents of the table on each column.

Revision as of 16:48, 14 March 2016



<myData>/particle_00003.em would be the particle with tag 3 in the data folder myData. A table will be able to operate on this particle if it has a row whose first column is the integer 3.


Format convention in a table

Template:Table Convention

The convention can be consulted each time by the command dthelp

Reading and writing tables




Visualization of tables

Basic info

http://wiki.dynamo.biozentrum.unibas.ch/w/doc/dynamo_table_info.html dtinfo dinfo table just plots on screen a summary of the contents of the table on each column.

Command line dtplot

[[ http://wiki.dynamo.biozentrum.unibas.ch/w/doc/dynamo_tableplot.html dtplot]] allows the creation of graphs like: positions of particles in a volume, orientations, distributions of orientations. One example of use of the command is to check if all the particles in a reference (column = 34) have a similar missing wedge orientation (the tilt angle is coded in column 8).

GUI for Basic plots

[[ http://wiki.dynamo.biozentrum.unibas.ch/w/doc/dynamo_table_show.html dtshow]] dtshow table opens a lightweight GUI that allows quick plotting of the contents of the table, and also a GUI access to all the plotting options of dtplot

GUI for complex plots dtview

[[ http://wiki.dynamo.biozentrum.unibas.ch/w/doc/dynamo_tableview.html dtview]] is a more complicated browser for table contents, allowing the joint visualization of pairs of properties for particle sets inside a table.

Table manipulation

Creating tables


Selection of parts of a table


Conversion tools for other software packages
