package org.broadinstitute.sting.gatk.walkers.annotator;
import org.broad.tribble.vcf.VCFHeaderLineType;
<BUG>import org.broad.tribble.vcf.VCFInfoHeaderLine;
import org.broadinstitute.sting.utils.pileup.ReadBackedPileup;
import org.broadinstitute.sting.utils.pileup.PileupElement;
import java.util.List;</BUG>
import java.util.Arrays;

package org.broadinstitute.sting.gatk.walkers.annotator;
import org.broad.tribble.util.variantcontext.Allele;
import org.broad.tribble.vcf.VCFHeaderLineType;
import org.broad.tribble.vcf.VCFInfoHeaderLine;
import org.broadinstitute.sting.gatk.walkers.genotyper.IndelGenotypeLikelihoodsCalculationModel;
import org.broadinstitute.sting.utils.pileup.ReadBackedPileup;
import org.broadinstitute.sting.utils.pileup.PileupElement;
import java.util.HashMap;
import java.util.LinkedHashMap;
import java.util.List;
import java.util.Arrays;
