RAC.SOLID_RECAL_MODE = RecalDataManager.SOLID_RECAL_MODE.recalModeFromString((String) value);
else if (argument.equals("solid_nocall_strategy"))
RAC.SOLID_NOCALL_STRATEGY = RecalDataManager.SOLID_NOCALL_STRATEGY.nocallStrategyFromString((String) value);
else if (argument.equals("mismatches_context_size"))
RAC.MISMATCHES_CONTEXT_SIZE = Integer.parseInt((String) value);
<BUG>else if (argument.equals("insertions_context_size"))
RAC.INSERTIONS_CONTEXT_SIZE = Integer.parseInt((String) value);
else if (argument.equals("deletions_context_size"))

RAC.DELETIONS_CONTEXT_SIZE = Integer.parseInt((String) value);
</BUG>
else if (argument.equals("mismatches_default_quality"))

RAC.SOLID_RECAL_MODE = RecalDataManager.SOLID_RECAL_MODE.recalModeFromString((String) value);
else if (argument.equals("solid_nocall_strategy"))
RAC.SOLID_NOCALL_STRATEGY = RecalDataManager.SOLID_NOCALL_STRATEGY.nocallStrategyFromString((String) value);
else if (argument.equals("mismatches_context_size"))
RAC.MISMATCHES_CONTEXT_SIZE = Integer.parseInt((String) value);
else if (argument.equals("indels_context_size"))
RAC.INDELS_CONTEXT_SIZE = Integer.parseInt((String) value);
else if (argument.equals("mismatches_default_quality"))
