import de.mpc.pia.intermediate.*;
import de.mpc.pia.intermediate.Peptide;
import de.mpc.pia.intermediate.compiler.PIACompiler;
import de.mpc.pia.modeller.score.ScoreModel;
import de.mpc.pia.modeller.score.ScoreModelEnum;
<BUG>import de.mpc.pia.tools.MzIdentMLTools;
import de.mpc.pia.tools.obo.OBOMapper;</BUG>
import de.mpc.pia.tools.pride.PRIDETools;
import org.apache.log4j.Logger;
import org.biojava.nbio.ontology.Term;

import de.mpc.pia.intermediate.*;
import de.mpc.pia.intermediate.Peptide;
import de.mpc.pia.intermediate.compiler.PIACompiler;
import de.mpc.pia.modeller.score.ScoreModel;
import de.mpc.pia.modeller.score.ScoreModelEnum;
import de.mpc.pia.tools.MzIdentMLTools;
import de.mpc.pia.tools.OntologyConstants;
import de.mpc.pia.tools.obo.OBOMapper;
import de.mpc.pia.tools.pride.PRIDETools;
import org.apache.log4j.Logger;
import org.biojava.nbio.ontology.Term;
