prideSearchParameters.setPrecursorAccuracy(peptideIonMassTolerance);
prideParametersReport += peptideIonMassTolerance + " " + prideSearchParameters.getPrecursorAccuracyType();
} else {
prideParametersReport += prideSearchParameters.getPrecursorAccuracy() + " " + prideSearchParameters.getPrecursorAccuracyType() + " (default)";
}
<BUG>prideParametersReport += "<br><br><b>Enzyme:</b> ";
if (!enzymes.isEmpty()) {</BUG>
if (enzymes.size() == 1) {
Enzyme mappedEnzyme = EnzymeFactory.getInstance().getUtilitiesEnzyme(enzymes.get(0));
if (mappedEnzyme == null) {

prideSearchParameters.setPrecursorAccuracy(peptideIonMassTolerance);
prideParametersReport += peptideIonMassTolerance + " " + prideSearchParameters.getPrecursorAccuracyType();
} else {
prideParametersReport += prideSearchParameters.getPrecursorAccuracy() + " " + prideSearchParameters.getPrecursorAccuracyType() + " (default)";
}
prideParametersReport += "<br><br><b>Enzyme:</b> ";
DigestionPreferences prideDigestionPreferences = DigestionPreferences.getDefaultPreferences();
prideSearchParameters.setDigestionPreferences(prideDigestionPreferences);
if (!enzymes.isEmpty()) {
if (enzymes.size() == 1) {
Enzyme mappedEnzyme = EnzymeFactory.getInstance().getUtilitiesEnzyme(enzymes.get(0));
if (mappedEnzyme == null) {
