section_path: Occurrence
section_name: Occurrence
paragraph_text: Occurrence
  
  Nitrogen is the most common pure element in the earth, making up 78.1% of the volume of the atmosphere (75.5% by mass), around 3.89 million gigatonnes (3.89 × 10 kg). Despite this, it is not very abundant in Earth's crust, making up somewhere around 19 parts per million of this, on par with niobium, gallium, and lithium. (This represents 300,000 to a million gigatonnes of nitrogen, depending on the mass of the crust.) The only important nitrogen minerals are nitre (potassium nitrate, saltpetre) and soda nitre (sodium nitrate, Chilean saltpetre). However, these have not been an important source of nitrates since the 1920s, when the industrial synthesis of ammonia and nitric acid became common.
  
  Nitrogen compounds constantly interchange between the atmosphere and living organisms. Nitrogen must first be processed, or " fixed ", into a plant-usable form, usually ammonia. Some nitrogen fixation is done by lightning strikes producing the nitrogen oxides, but most is done by diazotrophic bacteria through enzymes known as nitrogenases (although today industrial nitrogen fixation to ammonia is also significant). When the ammonia is taken up by plants, it is used to synthesise proteins. These plants are then digested by animals who use the nitrogen compounds to synthesise their proteins and excrete nitrogen-bearing waste. Finally, these organisms die and decompose, undergoing bacterial and environmental oxidation and denitrification, returning free dinitrogen to the atmosphere. Industrial nitrogen fixation by the Haber process is mostly used as fertiliser, although excess nitrogen–bearing waste, when leached, leads to eutrophication of freshwater and the creation of marine dead zones, as nitrogen-driven bacterial growth depletes water oxygen to the point that all higher organisms die. Furthermore, nitrous oxide, which is produced during denitrification, attacks the atmospheric ozone layer.
  
  Many saltwater fish manufacture large amounts of trimethylamine oxide to protect them from the high osmotic effects of their environment; conversion of this compound to dimethylamine is responsible for the early odour in unfresh saltwater fish. In animals, free radical nitric oxide (derived from an amino acid), serves as an important regulatory molecule for circulation.
  
  Nitric oxide's rapid reaction with water in animals results in the production of its metabolite nitrite. Animal metabolism of nitrogen in proteins, in general, results in the excretion of urea, while animal metabolism of nucleic acids results in the excretion of urea and uric acid. The characteristic odour of animal flesh decay is caused by the creation of long-chain, nitrogen-containing amines, such as putrescine and cadaverine, which are breakdown products of the amino acids ornithine and lysine, respectively, in decaying proteins.