def plot_neuron(ax, nrn,
                neurite_type=NeuriteType.all,
                plane='xy',
                soma_outline=True,
                diameter_scale=_DIAMETER_SCALE, linewidth=_LINEWIDTH,
                color=None, alpha=_ALPHA):
    '''Plots a 2D figure of the neuron, that contains a soma and the neurites

    Args:
        ax(matplotlib axes): on what to plot
        neurite_type(NeuriteType): an optional filter on the neurite type
        nrn(neuron): neuron to be plotted
        soma_outline(bool): should the soma be drawn as an outline
        plane(str): Any pair of 'xyz'
        diameter_scale(float): Scale factor multiplied with segment diameters before plotting
        linewidth(float): all segments are plotted with this width, but only if diameter_scale=None
        color(str or None): Color of plotted values, None corresponds to default choice
        alpha(float): Transparency of plotted values
    '''
    plot_soma(ax, nrn.soma, plane=plane, soma_outline=soma_outline, linewidth=linewidth,
              color=color, alpha=alpha)

    for neurite in iter_neurites(nrn, filt=tree_type_checker(neurite_type)):
        plot_tree(ax, neurite, plane=plane,
                  diameter_scale=diameter_scale, linewidth=linewidth,
                  color=color, alpha=alpha)

    ax.set_title(nrn.name)
    ax.set_xlabel(plane[0])
    ax.set_ylabel(plane[1])
def plot_neuron ( ax , nrn , neurite_type = NeuriteType . all , plane = 'xy' , soma_outline = True , diameter_scale = _DIAMETER_SCALE , linewidth = _LINEWIDTH , color = None , alpha = _ALPHA ) : plot_soma ( ax , nrn . soma , plane = plane , soma_outline = soma_outline , linewidth = linewidth , color = color , alpha = alpha ) for neurite in iter_neurites ( nrn , filt = tree_type_checker ( neurite_type ) ) : plot_tree ( ax , neurite , plane = plane , diameter_scale = diameter_scale , linewidth = linewidth , color = color , alpha = alpha ) ax . set_title ( nrn . name ) ax . set_xlabel ( plane [ 0 ] ) ax . set_ylabel ( plane [ 1 ] )
Plots a 2D figure of the neuron, that contains a soma and the neurites

    Args:
        ax(matplotlib axes): on what to plot
        neurite_type(NeuriteType): an optional filter on the neurite type
        nrn(neuron): neuron to be plotted
        soma_outline(bool): should the soma be drawn as an outline
        plane(str): Any pair of 'xyz'
        diameter_scale(float): Scale factor multiplied with segment diameters before plotting
        linewidth(float): all segments are plotted with this width, but only if diameter_scale=None
        color(str or None): Color of plotted values, None corresponds to default choice
        alpha(float): Transparency of plotted values