@Override
    public void generateFragments(IAtomContainer atomContainer) throws CDKException {
        Set<Long> fragmentSet = new HashSet<Long>();
        frameMap.clear();
        ringMap.clear();
        run(atomContainer, fragmentSet);
    }
@ Override public void generateFragments ( IAtomContainer atomContainer ) throws CDKException { Set < Long > fragmentSet = new HashSet < Long > ( ) ; frameMap . clear ( ) ; ringMap . clear ( ) ; run ( atomContainer , fragmentSet ) ; }
Perform the fragmentation procedure.

@param atomContainer The input molecule
@throws CDKException