def _serialize_record(self, record):
        """Serialize whole Record"""
        f = self._empty_to_dot
        row = [record.CHROM, record.POS]
        row.append(f(";".join(record.ID)))
        row.append(f(record.REF))
        if not record.ALT:
            row.append(".")
        else:
            row.append(",".join([f(a.serialize()) for a in record.ALT]))
        row.append(f(record.QUAL))
        row.append(f(";".join(record.FILTER)))
        row.append(f(self._serialize_info(record)))
        if record.FORMAT:
            row.append(":".join(record.FORMAT))
        row += [
            self._serialize_call(record.FORMAT, record.call_for_sample[s])
            for s in self.header.samples.names
        ]
        print(*row, sep="\t", file=self.stream)
def _serialize_record ( self , record ) : f = self . _empty_to_dot row = [ record . CHROM , record . POS ] row . append ( f ( ";" . join ( record . ID ) ) ) row . append ( f ( record . REF ) ) if not record . ALT : row . append ( "." ) else : row . append ( "," . join ( [ f ( a . serialize ( ) ) for a in record . ALT ] ) ) row . append ( f ( record . QUAL ) ) row . append ( f ( ";" . join ( record . FILTER ) ) ) row . append ( f ( self . _serialize_info ( record ) ) ) if record . FORMAT : row . append ( ":" . join ( record . FORMAT ) ) row += [ self . _serialize_call ( record . FORMAT , record . call_for_sample [ s ] ) for s in self . header . samples . names ] print ( * row , sep = "\t" , file = self . stream )
Serialize whole Record