public String generateHELMFromFastaNucleotide(String notation)
			throws FastaFormatException, org.helm.notation2.parser.exceptionparser.NotationException,
			ChemistryException, MonomerLoadingException, NucleotideLoadingException {
		String result = FastaFormat.generateRNAPolymersFromFastaFormatHELM1(notation).toHELM2();
		setMonomerFactoryToDefault(notation);
		return result;
	}
public String generateHELMFromFastaNucleotide ( String notation ) throws FastaFormatException , org . helm . notation2 . parser . exceptionparser . NotationException , ChemistryException , MonomerLoadingException , NucleotideLoadingException { String result = FastaFormat . generateRNAPolymersFromFastaFormatHELM1 ( notation ) . toHELM2 ( ) ; setMonomerFactoryToDefault ( notation ) ; return result ; }
method to generate HELM from a FASTA containing rna/dna sequences

@param notation
FASTA containing rna/dna sequences
@return HELM
@throws FastaFormatException
if the input is not valid
@throws org.helm.notation2.parser.exceptionparser.NotationException
if notation is not valid
@throws ChemistryException
if chemistry engine can not be initialized
@throws MonomerLoadingException
if monomers can not be loaded
@throws NucleotideLoadingException
if nucleotides can not be loaded