def set_workdir(self, workdir, chroot=False):
        """Set the working directory. Cannot be set more than once unless chroot is True"""
        if not chroot and hasattr(self, "workdir") and self.workdir != workdir:
            raise ValueError("self.workdir != workdir: %s, %s" % (self.workdir,  workdir))

        self.workdir = os.path.abspath(workdir)

        # Files required for the execution.
        self.input_file = File(os.path.join(self.workdir, "run.abi"))
        self.output_file = File(os.path.join(self.workdir, "run.abo"))
        self.files_file = File(os.path.join(self.workdir, "run.files"))
        self.job_file = File(os.path.join(self.workdir, "job.sh"))
        self.log_file = File(os.path.join(self.workdir, "run.log"))
        self.stderr_file = File(os.path.join(self.workdir, "run.err"))
        self.start_lockfile = File(os.path.join(self.workdir, "__startlock__"))
        # This file is produced by Abinit if nprocs > 1 and MPI_ABORT.
        self.mpiabort_file = File(os.path.join(self.workdir, "__ABI_MPIABORTFILE__"))

        # Directories with input|output|temporary data.
        self.wdir = Directory(self.workdir)
        self.indir = Directory(os.path.join(self.workdir, "indata"))
        self.outdir = Directory(os.path.join(self.workdir, "outdata"))
        self.tmpdir = Directory(os.path.join(self.workdir, "tmpdata"))

        # stderr and output file of the queue manager. Note extensions.
        self.qerr_file = File(os.path.join(self.workdir, "queue.qerr"))
        self.qout_file = File(os.path.join(self.workdir, "queue.qout"))
def set_workdir ( self , workdir , chroot = False ) : if not chroot and hasattr ( self , "workdir" ) and self . workdir != workdir : raise ValueError ( "self.workdir != workdir: %s, %s" % ( self . workdir , workdir ) ) self . workdir = os . path . abspath ( workdir ) self . input_file = File ( os . path . join ( self . workdir , "run.abi" ) ) self . output_file = File ( os . path . join ( self . workdir , "run.abo" ) ) self . files_file = File ( os . path . join ( self . workdir , "run.files" ) ) self . job_file = File ( os . path . join ( self . workdir , "job.sh" ) ) self . log_file = File ( os . path . join ( self . workdir , "run.log" ) ) self . stderr_file = File ( os . path . join ( self . workdir , "run.err" ) ) self . start_lockfile = File ( os . path . join ( self . workdir , "__startlock__" ) ) self . mpiabort_file = File ( os . path . join ( self . workdir , "__ABI_MPIABORTFILE__" ) ) self . wdir = Directory ( self . workdir ) self . indir = Directory ( os . path . join ( self . workdir , "indata" ) ) self . outdir = Directory ( os . path . join ( self . workdir , "outdata" ) ) self . tmpdir = Directory ( os . path . join ( self . workdir , "tmpdata" ) ) self . qerr_file = File ( os . path . join ( self . workdir , "queue.qerr" ) ) self . qout_file = File ( os . path . join ( self . workdir , "queue.qout" ) )
Set the working directory. Cannot be set more than once unless chroot is True