def __init__(self, ind_id, case_id=None, mother=None,
                 father=None, sex=None, phenotype=None, ind_index=None,
                 variant_source=None, bam_path=None):
        """Construct a individual object

            Args:
                ind_id (str): The individual id
                case_id (str): What case it belongs to
                mother (str): The mother id
                father (str): The father id
                sex (str): Sex in ped format
                phenotype (str): Phenotype in ped format
                ind_index (int): Either the column in the vcf or what position in
                             the gemini database the individual represents.
                variant_source (str): Path to source (vcf file)
                bam_path (str): Path to bamfiles (vcf file)
        """
        super(Individual, self).__init__(
            ind_id=ind_id,
            name=ind_id,
            case_id=case_id,
            mother=mother,
            father=father,
            sex=sex,
            phenotype=phenotype,
            ind_index=ind_index,
            variant_source=variant_source,
            bam_path=bam_path
        )
def __init__ ( self , ind_id , case_id = None , mother = None , father = None , sex = None , phenotype = None , ind_index = None , variant_source = None , bam_path = None ) : super ( Individual , self ) . __init__ ( ind_id = ind_id , name = ind_id , case_id = case_id , mother = mother , father = father , sex = sex , phenotype = phenotype , ind_index = ind_index , variant_source = variant_source , bam_path = bam_path )
Construct a individual object

            Args:
                ind_id (str): The individual id
                case_id (str): What case it belongs to
                mother (str): The mother id
                father (str): The father id
                sex (str): Sex in ped format
                phenotype (str): Phenotype in ped format
                ind_index (int): Either the column in the vcf or what position in
                             the gemini database the individual represents.
                variant_source (str): Path to source (vcf file)
                bam_path (str): Path to bamfiles (vcf file)