def create_pep_protein_quant_lookup(fns, pqdb, poolnames, featcolnr, patterns,
                                    storefuns, isobqcolpattern=None,
                                    psmnrpattern=None):
    """Does the work when creating peptide and protein quant lookups. This
    loops through storing options and parses columns, passing on to the
    storing functions"""
    tablefn_map = create_tablefn_map(fns, pqdb, poolnames)
    feat_map = pqdb.get_feature_map()
    for pattern, storefun in zip(patterns, storefuns):
        if pattern is None:
            continue
        colmap = get_colmap(fns, pattern, single_col=True)
        if colmap:
            store_single_col_data(fns, tablefn_map, feat_map,
                                  storefun, featcolnr, colmap)
    if isobqcolpattern is not None:
        isocolmap = get_colmap(fns, isobqcolpattern, antipattern=psmnrpattern)
    else:
        return
    if psmnrpattern is not None:
        psmcolmap = get_colmap(fns, psmnrpattern)
    else:
        psmcolmap = False
    create_isobaric_quant_lookup(fns, tablefn_map,
                                 feat_map, pqdb,
                                 featcolnr,
                                 isocolmap, psmcolmap)
def create_pep_protein_quant_lookup ( fns , pqdb , poolnames , featcolnr , patterns , storefuns , isobqcolpattern = None , psmnrpattern = None ) : tablefn_map = create_tablefn_map ( fns , pqdb , poolnames ) feat_map = pqdb . get_feature_map ( ) for pattern , storefun in zip ( patterns , storefuns ) : if pattern is None : continue colmap = get_colmap ( fns , pattern , single_col = True ) if colmap : store_single_col_data ( fns , tablefn_map , feat_map , storefun , featcolnr , colmap ) if isobqcolpattern is not None : isocolmap = get_colmap ( fns , isobqcolpattern , antipattern = psmnrpattern ) else : return if psmnrpattern is not None : psmcolmap = get_colmap ( fns , psmnrpattern ) else : psmcolmap = False create_isobaric_quant_lookup ( fns , tablefn_map , feat_map , pqdb , featcolnr , isocolmap , psmcolmap )
Does the work when creating peptide and protein quant lookups. This
    loops through storing options and parses columns, passing on to the
    storing functions