def build_vcf_deletion(x, genome_2bit):
    """Provide representation of deletion from BedPE breakpoints.
    """
    base1 = genome_2bit[x.chrom1].get(x.start1, x.start1 + 1).upper()
    id1 = "hydra{0}".format(x.name)
    return VcfLine(x.chrom1, x.start1, id1, base1, "<DEL>",
                   _vcf_single_end_info(x, "DEL", True))
def build_vcf_deletion ( x , genome_2bit ) : base1 = genome_2bit [ x . chrom1 ] . get ( x . start1 , x . start1 + 1 ) . upper ( ) id1 = "hydra{0}" . format ( x . name ) return VcfLine ( x . chrom1 , x . start1 , id1 , base1 , "<DEL>" , _vcf_single_end_info ( x , "DEL" , True ) )
Provide representation of deletion from BedPE breakpoints.