update the environment

def update(self, reconfigure=False):
        """ update the environment """
        try:
            self.phase = PHASE.UPDATE
            self.logger.info("Updating environment %s..." % self.namespace)
            self.install_sandboxes()
            self.instantiate_features()
            # We don't grab inputs, only on install
            # updates inputs are grabbed on demand
            # self.grab_inputs(reconfigure=reconfigure)
            if reconfigure:
                self.grab_inputs(reconfigure=True)
            else:
                self._copy_source_to_target()
            self._specialize(reconfigure=reconfigure)
            for feature in self.features.run_order:
                self.run_action(feature, 'sync')
            self.inject_environment_config()
            self._finalize()
        except Exception:
            self.logger.debug("", exc_info=sys.exc_info())
            et, ei, tb = sys.exc_info()
            reraise(et, ei, tb)