Utility function to construct a filename for a cache file, given a VCF
    file name (where the original data came from) and other parameters.

def _mk_cache_fn(vcf_fn, array_type, region=None, cachedir=None,
                 compress=False):
    """Utility function to construct a filename for a cache file, given a VCF
    file name (where the original data came from) and other parameters."""

    # ensure cache dir exists
    if cachedir is None:
        # use the VCF file name as the base for a directory name
        cachedir = vcf_fn + config.CACHEDIR_SUFFIX
    if not os.path.exists(cachedir):
        # ensure cache dir exists
        os.makedirs(cachedir)
    else:
        assert os.path.isdir(cachedir), \
            'unexpected error, cache directory is not a directory: %r' \
            % cachedir

    # handle compression
    if compress:
        suffix = 'npz'
    else:
        suffix = 'npy'

    # handle region
    if region is None:
        # loading the whole genome (i.e., all variants)
        cache_fn = os.path.join(cachedir, '%s.%s' % (array_type, suffix))
    else:
        # loading a specific region
        region = region.replace(':', '__').replace('-', '_')
        cache_fn = os.path.join(cachedir, '%s.%s.%s' % (array_type, region,
                                                        suffix))
    return cache_fn