user15303: I have an Uno that loops processing serial commands and reading from a DHT11 sensor. For whatever reason, the device often stops responding. I put an LED on a pin and gave it a blink to see whether the loop is running, and sure enough the loop() stops running (the LED stays ON or OFF, depending on when it froze). I enabled the watchdog at 2 seconds, but it does not reset the device [it still stays frozen, even though wdt_reset() is called at basically the same time as the blinking LED is toggled].
I then tried various combinations of BaudRate=1200 (or 9600), Open(), Close(), DtrEnable=true [on both the Uno and the Mega], yet none of the combinations would make the device reset. The device will reset, however, if I re-upload the sketch using the Arduino IDE. I would like to emulate this resetting functionality from my own program's code. Reading on the official site, it sounds like the Baud=1200 reset feature is available only on certain models (not the Uno or Mega).
My code is by no means simple as I am no beginner when it comes to programming. This is the first time, however, that I have had a finicky unit that freezes all the time (say between 10 minutes and 2 hours into running). I merely want to reset the unit from the PC using code, like the Arduino IDE does. On the other hand, if the watchdog worked correctly, that would be fine as well. At the same time, I am not that experienced with electronic circuits, so making a circuit that would "press" the "reset" pin when the LED stops blinking is not something I am quite ready to do. Plus, I do not want to add a bunch more components if the job can be done through code.
On a side note, the Serial connection appears to be fully functional the whole time. The LED on the unit that indicates receiving from the PC continues to function whenever I send data to the device. I can connect and reconnect without any apparent issues. Plus, the Arduino IDE has no problem uploading new sketches and resetting the device. Naturally, no data is received from the device after it freezes (until it gets reset, of course).
Update 1: I made a simple sketch (see below) that would run for about 20 seconds and then let the WDT watchdog timeout do its thing. Result:
(a) Running the code on an Arduino-brand Mega 2560, the device simply resets every 20 seconds and keeps blinking;
(b) Running the code on a generic (made in China) Uno R3, at timeout the L light turns on and the device becomes completely unresponsive (not even the reset button or the Arduino IDE can save it); It must be unplugged to reset it.
(c) Running the code on an Arduino-brand Uno R3 works as expected, just like on the Mega 2560.
#include <avr/wdt.h>
void setup() {
  wdt_reset();
  wdt_enable(WDTO_2S);
  wdt_reset();
  pinMode(A5, OUTPUT);
  delay(1);
  Serial.begin(125000);
}
unsigned int LoopCount = 0;
bool TestLED = false;
void loop() {
  if(LoopCount % 300 == 0){
    TestLED = !TestLED;
    digitalWrite(A5, TestLED ? HIGH:LOW);
    if(LoopCount < 20000)
      wdt_reset();
  }
  delayMicroseconds(1000);
  LoopCount++;
}

Nevertheless, I still would like if someone could provide a solution in terms of resetting a frozen generic Uno from Serial in .NET code -- not the WDT frozen, but the normal frozen (of unknown origin). I may be the one coding, but I'm unfortunately not the one deciding which units are put into production.
Update 2: I switched the EasyDriver to its own power source, where the only things in common with the stepper and the Arduino were the ground and the two signal wires. The generic Uno board ended up being even more problematic, going into a new freeze mode (after just a minute or two, pretty reliably) where the L light would blink very quickly. I'm not sure whether it had anything to do with toggling of the DtrEnable property, but I decided to stop messing with the generic board for the time being. The name-brand Uno appeared to freeze occasionally or malfunction as well with the original wiring, but the Watchdog did its thing and reset it straight away every time. Also, I tried toggling the RtsEnable property with the generic board, but it didn't seem to make a difference. The board would become unresponsive and unrevivable, even from the Arduino IDE.
Some more background: The reliability problem only really started to surface when I hooked up the DHT11 temperature sensor, even though the freezing would tend to happen only when the stepper motor was running. I have the DHT11 hooked up exactly as advocated by Adafruit, and it tends to read correctly most of the time.
Update 3: I was thinking maybe the SainSmart Mega2560 would be different from the no-name generic I was using. After getting one and hooking it up, I have found it to have the exact same problem. The SainSmart CPU crashes between 5 and 15 minutes into running. The serial chip (or module) keeps going as you can still see the serial lights change when you send to it. However, the on-board reset button does nothing, and the Arduino IDE cannot upload to the device or reset it. Only a power cycle can save it.

user7859: You can reset the Uno over the serial link by toggling the DTR line. How you do that depends on what platform and language you are using. There is a capacitor between the line and the reset pin, so the toggle must last a minimum ammount of time. 0.5 seconds works. 
This is ok for just a quick fix hack, but probably better in the long run to (1) figure out why the code is crashing, and/or (2) figure out why WDT is not working. 

15303: <p>I have an Uno that loops processing serial commands and reading from a DHT11 sensor. For whatever reason, the device often stops responding. I put an LED on a pin and gave it a blink to see whether the loop is running, and sure enough the loop() stops running (the LED stays ON or OFF, depending on when it froze). I enabled the watchdog at 2 seconds, but it does not reset the device [it still stays frozen, even though wdt_reset() is called at basically the same time as the blinking LED is toggled].</p>

<p>I then tried various combinations of BaudRate=1200 (or 9600), Open(), Close(), DtrEnable=true [on both the Uno and the Mega], yet none of the combinations would make the device reset. The device <em>will</em> reset, however, if I re-upload the sketch using the Arduino IDE. I would like to emulate this resetting functionality from my own program's code. Reading on the official site, it sounds like the Baud=1200 reset feature is available only on certain models (not the Uno or Mega).</p>

<p>My code is by no means simple as I am no beginner when it comes to programming. This is the first time, however, that I have had a finicky unit that freezes all the time (say between 10 minutes and 2 hours into running). I merely want to reset the unit from the PC using code, like the Arduino IDE does. On the other hand, if the watchdog worked correctly, that would be fine as well. At the same time, I am not that experienced with electronic circuits, so making a circuit that would "press" the "reset" pin when the LED stops blinking is not something I am quite ready to do. Plus, I do not want to add a bunch more components if the job can be done through code.</p>

<p>On a side note, the Serial connection appears to be fully functional the whole time. The LED on the unit that indicates receiving from the PC continues to function whenever I send data to the device. I can connect and reconnect without any apparent issues. Plus, the Arduino IDE has no problem uploading new sketches and resetting the device. Naturally, no data is received from the device after it freezes (until it gets reset, of course).</p>

<p><strong>Update 1</strong>: I made a simple sketch (see below) that would run for about 20 seconds and then let the WDT watchdog timeout do its thing. Result:
(a) Running the code on an Arduino-brand Mega 2560, the device simply resets every 20 seconds and keeps blinking;
(b) Running the code on a generic (made in China) Uno R3, at timeout the L light turns on and the device becomes completely unresponsive (not even the reset button or the Arduino IDE can save it); It must be unplugged to reset it.
(c) Running the code on an Arduino-brand Uno R3 works as expected, just like on the Mega 2560.</p>

<pre><code>#include &lt;avr/wdt.h&gt;
void setup() {
  wdt_reset();
  wdt_enable(WDTO_2S);
  wdt_reset();
  pinMode(A5, OUTPUT);
  delay(1);
  Serial.begin(125000);
}
unsigned int LoopCount = 0;
bool TestLED = false;
void loop() {
  if(LoopCount % 300 == 0){
    TestLED = !TestLED;
    digitalWrite(A5, TestLED ? HIGH:LOW);
    if(LoopCount &lt; 20000)
      wdt_reset();
  }
  delayMicroseconds(1000);
  LoopCount++;
}
</code></pre>

<p>Nevertheless, I still would like if someone could provide a solution in terms of resetting a frozen generic Uno from Serial in .NET code -- not the WDT frozen, but the normal frozen (of unknown origin). I may be the one coding, but I'm unfortunately not the one deciding which units are put into production.</p>

<p><strong>Update 2</strong>: I switched the EasyDriver to its own power source, where the only things in common with the stepper and the Arduino were the ground and the two signal wires. The generic Uno board ended up being even more problematic, going into a new freeze mode (after just a minute or two, pretty reliably) where the L light would blink very quickly. I'm not sure whether it had anything to do with toggling of the DtrEnable property, but I decided to stop messing with the generic board for the time being. The name-brand Uno appeared to freeze occasionally or malfunction as well with the original wiring, but the Watchdog did its thing and reset it straight away every time. Also, I tried toggling the RtsEnable property with the generic board, but it didn't seem to make a difference. The board would become unresponsive and unrevivable, even from the Arduino IDE.</p>

<p>Some more background: The reliability problem only really started to surface when I hooked up the DHT11 temperature sensor, <em>even though</em> the freezing would tend to happen only when the stepper motor was running. I have the DHT11 hooked up exactly as advocated by Adafruit, and it tends to read correctly most of the time.</p>

<p><strong>Update 3</strong>: I was thinking maybe the SainSmart Mega2560 would be different from the no-name generic I was using. After getting one and hooking it up, I have found it to have the exact same problem. The SainSmart CPU crashes between 5 and 15 minutes into running. The serial chip (or module) keeps going as you can still see the serial lights change when you send to it. However, the on-board reset button does nothing, and the Arduino IDE cannot upload to the device or reset it. Only a power cycle can save it.</p>
 7859: <p>You can reset the Uno over the serial link by toggling the DTR line. How you do that depends on what platform and language you are using. There is a capacitor between the line and the reset pin, so the toggle must last a minimum ammount of time. 0.5 seconds works. </p>

<p>This is ok for just a quick fix hack, but probably better in the long run to (1) figure out why the code is crashing, and/or (2) figure out why WDT is not working. </p>
