text: user2005: I am trying to run UMAP in the following way:
  RunUMAP(seurat_object, dims.use = 1:15, reduction.use = "pca", reduction.name = "umap", 
      reduction.key = "UMAP", n_neighbors = 30L, min_dist = 0.3, metric = "correlation")
  
  Or just this:
  RunUMAP(seurat_object, dims.use = 1:15, reduction.use = "pca")
  
  It is giving me the error: 
  
  Error in py_get_attr_impl(x, name, silent) : 
      AttributeError: module 'umap' has no attribute 'UMAP'
  
  I already installed umap-learn successfully in this way: conda install -c conda-forge umap-learn and checked that Rstudio is using the same python version as is provided by default in the terminal: 3.6.5
  
  user163: This is resolved by installing the more recent version of the code from GitHub.
  git clone https://github.com/lmcinnes/umap
  cd umap
  pip install --user -r requirements.txt
  python setup.py install --user
  
  As Peter said, this kind of question is best directed to the Issues page on their GitHub repository.
  
original_text: 2005: <p>I am trying to run <code>UMAP</code> in the following way:</p>
  
  <pre><code>RunUMAP(seurat_object, dims.use = 1:15, reduction.use = "pca", reduction.name = "umap", 
      reduction.key = "UMAP", n_neighbors = 30L, min_dist = 0.3, metric = "correlation")
  </code></pre>
  
  <p>Or just this:</p>
  
  <pre><code>RunUMAP(seurat_object, dims.use = 1:15, reduction.use = "pca")
  </code></pre>
  
  <p>It is giving me the error: </p>
  
  <blockquote>
    <p>Error in py_get_attr_impl(x, name, silent) : 
      AttributeError: module 'umap' has no attribute 'UMAP'</p>
  </blockquote>
  
  <p>I already installed <code>umap-learn</code> successfully in this way: <code>conda install -c conda-forge umap-learn</code> and checked that <code>Rstudio</code> is using the same <code>python</code> version as is provided by default in the terminal: <code>3.6.5</code></p>
   163: <p>This is resolved by installing the more recent version of the code from GitHub.</p>
  
  <pre><code>git clone https://github.com/lmcinnes/umap
  cd umap
  pip install --user -r requirements.txt
  python setup.py install --user
  </code></pre>
  
  <p>As Peter said, this kind of question is best directed to the Issues page on their GitHub repository.</p>
  