text: user8601: Is there a way to generate a WGCNA co-expression graph in R, and then to import that graph into Python such that I can represent it using a networkX object? 
  
  user851: You can use exportNetworkToCytoscape or exportNetworkToVisANT to generate and egde list file with the two nodes at the ends and weight for each edge. Hopefully there's a way to import that into networkX. 
  
original_text: 8601: <p>Is there a way to generate a WGCNA co-expression graph in R, and then to import that graph into Python such that I can represent it using a <a href="https://networkx.github.io/" rel="nofollow noreferrer">networkX</a> object? </p>
   851: <p>You can use <code>exportNetworkToCytoscape</code> or <code>exportNetworkToVisANT</code> to generate and egde list file with the two nodes at the ends and weight for each edge. Hopefully there's a way to import that into networkX. </p>
  