text: user-1: I'm taking a genomics course at school, and we have a final project due in a few weeks. 
  Now, I can write bash scripts to sort and analyze the data, etc. However, I'm not quite sure how to actually get the data from the database. I was hoping to get some help there.
  I'd like to get the assemblies of genomes for the species in the Borrelia genus. Is there any way that I can do this using commands like "wget", for example. I'm not even sure what URL I'd have to give the computer to go fetch these. Then once I give it the correct URL, how should I tell it what file in that directory to download?
  I'd greatly appreciate some help on this issue.
  
  user345: For downloading data from commandline use the E-utilities of NCBI.
  
original_text: -1: <p>I'm taking a genomics course at school, and we have a final project due in a few weeks. 
  Now, I can write bash scripts to sort and analyze the data, etc. However, I'm not quite sure how to actually <em>get</em> the data from the database. I was hoping to get some help there.</p>
  
  <p>I'd like to get the assemblies of genomes for the species in the <em>Borrelia</em> genus. Is there any way that I can do this using commands like "wget", for example. I'm not even sure what URL I'd have to give the computer to go fetch these. Then once I give it the correct URL, how should I tell it what file in that directory to download?</p>
  
  <p>I'd greatly appreciate some help on this issue.</p>
   345: <p>For downloading data from commandline use the <a href="https://www.ncbi.nlm.nih.gov/books/NBK25500/" rel="nofollow noreferrer">E-utilities</a> of NCBI.</p>
  