text: user12036: I am looking for a tool that performs a sequence similarity algorithm for proteins. More specifically, I am looking for something that would be usable in Python (or anything else usable in the command line actually) which has a similar output to the FASTA tool, i.e:
  
  For my use case, the 'Source' column is not super relevant, so it does not matter if it's not included in the output. What's most important is the DB:ID and the match statistics.
  Have you used anything similar? Do you have any suggestions regarding such a tool?
  Thanks in advance!
  
  user3541: Apparently there is a REST API for FASTA. Looks like there are few dependencies but other than that should be straightforward to use.
  
original_text: 12036: <p>I am looking for a tool that performs a sequence similarity algorithm for proteins. More specifically, I am looking for something that would be usable in Python (or anything else usable in the command line actually) which has a similar output to the FASTA tool, i.e:</p>
  <p><a href="https://i.stack.imgur.com/hgDzZ.png" rel="nofollow noreferrer"><img src="https://i.stack.imgur.com/hgDzZ.png" alt="enter image description here" /></a></p>
  <p>For my use case, the 'Source' column is not super relevant, so it does not matter if it's not included in the output. What's most important is the DB:ID and the match statistics.</p>
  <p>Have you used anything similar? Do you have any suggestions regarding such a tool?
  Thanks in advance!</p>
   3541: <p>Apparently there is a <a href="https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/FASTA+Help+and+Documentation#FASTAHelpandDocumentation-RESTAPI" rel="nofollow noreferrer">REST API for FASTA</a>. Looks like there are few dependencies but other than that should be straightforward to use.</p>
  