text: user14102: I tried to install vcf2maf following this tutorial from GitHub: https://github.com/mskcc/vcf2maf.
  I get a repeat error when I try to test out vcf2maf using the code:
  perl vcf2maf.pl --input-vcf tests/test.vcf --output-maf tests/test.vep.maf
  
  The error message looks like this:
  '''STATUS: Running VEP and writing to: tests/test.vep.vcf
  ERROR: Cannot find VEP script under: /Users/user/miniconda3/bin'''
  
  Basically I followed every steps provided on the tutorial.
  Does anyone could help me find out what is going wrong?
  I am working on macOS Monterey 12.2.1 with an Intel Core i5 processor.
  
  user3848: Install it via anaconda/conda either,
  conda install -c bioconda vcf2maf
  conda install -c bioconda/label/cf201901 vcf2maf
  
  I would be surprised if that installation fails. A possible issue is Perl version and system version.
  
original_text: 14102: <p>I tried to install <code>vcf2maf</code> following this tutorial from GitHub: <a href="https://github.com/mskcc/vcf2maf" rel="nofollow noreferrer">https://github.com/mskcc/vcf2maf</a>.</p>
  <p>I get a repeat error when I try to test out vcf2maf using the code:</p>
  <pre><code>perl vcf2maf.pl --input-vcf tests/test.vcf --output-maf tests/test.vep.maf
  </code></pre>
  <p>The error message looks like this:</p>
  <pre><code>'''STATUS: Running VEP and writing to: tests/test.vep.vcf
  ERROR: Cannot find VEP script under: /Users/user/miniconda3/bin'''
  </code></pre>
  <p>Basically I followed every steps provided on the tutorial.
  Does anyone could help me find out what is going wrong?</p>
  <p>I am working on macOS Monterey 12.2.1 with an Intel Core i5 processor.</p>
   3848: <p>Install it via anaconda/conda either,</p>
  <pre><code>conda install -c bioconda vcf2maf
  conda install -c bioconda/label/cf201901 vcf2maf
  </code></pre>
  <p>I would be surprised if that installation fails. A possible issue is Perl version and system version.</p>
  