src/c++/lib/common/Alignment.cpp
/* get the best possible score for comparing two sequences of length len */
get the best possible score for comparing two sequences of length len
get the best possible score for comparing two sequences of length len
int Alignment::bestScore(int len)
{
    AlignmentParameters ap;
    getParameters(ap);
    return len * ap.maxScore();
}
int Alignment :: bestScore ( int len ) { AlignmentParameters ap ; getParameters ( ap ) ; return len * ap . maxScore ( ) ; }
get the best possible score for comparing two sequences of length len
get the best possible score for comparing two sequences of length len