sam.c
/***************************************************************************
 *  Use auto-c2man to generate a man page from this comment
 *
 *  Library:
 *      #include <biolibc/gff.h>
 *      -lbiolibc -lxtend
 *
 *  Description:
 *      Return the amount of overlap between a GFF feature and a SAM
 *      alignment.
 *  
 *  Arguments:
 *      alignment   Pointer to a bl_sam_t object
 *      feature     Pointer to a bl_gff_t object
 *
 *  Returns:
 *      The number of bases of overlap between the feature and alignment.
 *      A zero or negative return value indicates no overlap.
 *
 *  See also:
 *      bl_gff_sam_overlap(3)
 *
 *  History: 
 *  Date        Name        Modification
 *  2022-04-07  Jason Bacon Begin
 ***************************************************************************/
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Library:
#include 
-lbiolibc -lxtend

Return the amount of overlap between a GFF feature and a SAM
alignment.

alignment   Pointer to a bl_sam_t object
feature     Pointer to a bl_gff_t object

The number of bases of overlap between the feature and alignment.
A zero or negative return value indicates no overlap.



Date        Name        Modification
2022-04-07  Jason Bacon Begin
Use auto - c2man to generate a man page from this comment Library : #include - lbiolibc - lxtend Return the amount of overlap between a GFF feature and a SAM alignment . alignment Pointer to a bl_sam_t object feature Pointer to a bl_gff_t object The number of bases of overlap between the feature and alignment . A zero or negative return value indicates no overlap . Date Name Modification 2022 - 04 - 07 Jason Bacon Begin
int64_t bl_sam_gff_overlap(bl_sam_t *alignment, bl_gff_t *feature)
{
    return bl_gff_sam_overlap(feature, alignment);
}
int64_t bl_sam_gff_overlap ( bl_sam_t * alignment , bl_gff_t * feature ) { return bl_gff_sam_overlap ( feature , alignment ) ; }
Use auto-c2man to generate a man page from this comment
  Library:
      #include <biolibc/gff.h>
      -lbiolibc -lxtend
Use auto - c2man to generate a man page from this comment Library : #include <biolibc / gff . h > - lbiolibc - lxtend