original_docstring: Checks if Fiji is downloaded.
  
      Checks if an existing version of Fiji is downloaded and whether
      it is identified as the system variable "FIJI_BIN." Only compatible
      with Linux and Mac systems.
  
      
docstring: Checks if Fiji is downloaded.
  Checks if an existing version of Fiji is downloaded and whether
  it is identified as the system variable "FIJI_BIN." Only compatible
  with Linux and Mac systems.
docstring_tokens: Checks if Fiji is downloaded . Checks if an existing version of Fiji is downloaded and whether it is identified as the system variable " FIJI_BIN . " Only compatible with Linux and Mac systems .
code: def _get_fiji():
      """Checks if Fiji is downloaded.
  
      Checks if an existing version of Fiji is downloaded and whether
      it is identified as the system variable "FIJI_BIN." Only compatible
      with Linux and Mac systems.
  
      """
      home = os.path.expanduser("~")
      paths = [
          os.path.join(home, 'Applications/Fiji.app/Contents/MacOS/ImageJ-macosx'),
          os.path.join(home, 'Fiji.app/Contents/MacOS/ImageJ-macosx'),
          os.path.join(home, 'Fiji.app/ImageJ-linux64')
      ]
      exists = [os.path.exists(p) for p in paths]
      # paths = list(compress(paths, exists))
  
      # Currently only works on Mac and Linux
      if sys.platform != 'darwin' and not sys.platform.startswith('linux'):
          # print('System is not Linux or Mac')
          raise ValueError('System is not Linux or Mac')
  
      # Has the user specified Fiji for us already as an environment variable?
      # Want to use it if it is already installed
      elif "FIJI_BIN" in os.environ:
          print("FIJI_BIN defined.")
          return os.environ["FIJI_BIN"]
  
      # Is Fiji installed somewhere, but not defined in path?
      # Checks in two locations, doesn't search entire system
      elif any(exists):
          print('Exists elsewhere')
          counter = 0
          for exist in exists:
              if exist:
                  path = paths[counter]
              counter += 1
          return path
  
      else:
          # Download it if not
          if sys.platform == 'darwin':
              subprocess.run(['wget', 'https://downloads.imagej.net/fiji/latest/fiji-macosx.zip'], cwd=home)
              subprocess.run(['unzip', 'fiji-macosx.zip'], cwd=home)
              os.environ['FIJI_BIN'] = os.path.join(home, 'Fiji.app/Contents/MacOS/ImageJ-macosx')
  
          elif sys.platform.startswith('linux'):
              subprocess.run(['wget', 'https://downloads.imagej.net/fiji/latest/fiji-linux64.zip'], cwd=home)
              subprocess.run(['unzip', 'fiji-linux64.zip'], cwd=home)
              os.environ['FIJI_BIN'] = os.path.join(home, 'Fiji.app/ImageJ-linux64')
          print("Downloaded Fiji")
          return _get_fiji()
code_tokens: def _get_fiji ( ) : home = os . path . expanduser ( "~" ) paths = [ os . path . join ( home , 'Applications/Fiji.app/Contents/MacOS/ImageJ-macosx' ) , os . path . join ( home , 'Fiji.app/Contents/MacOS/ImageJ-macosx' ) , os . path . join ( home , 'Fiji.app/ImageJ-linux64' ) ] exists = [ os . path . exists ( p ) for p in paths ] if sys . platform != 'darwin' and not sys . platform . startswith ( 'linux' ) : raise ValueError ( 'System is not Linux or Mac' ) elif "FIJI_BIN" in os . environ : print ( "FIJI_BIN defined." ) return os . environ [ "FIJI_BIN" ] elif any ( exists ) : print ( 'Exists elsewhere' ) counter = 0 for exist in exists : if exist : path = paths [ counter ] counter += 1 return path else : if sys . platform == 'darwin' : subprocess . run ( [ 'wget' , 'https://downloads.imagej.net/fiji/latest/fiji-macosx.zip' ] , cwd = home ) subprocess . run ( [ 'unzip' , 'fiji-macosx.zip' ] , cwd = home ) os . environ [ 'FIJI_BIN' ] = os . path . join ( home , 'Fiji.app/Contents/MacOS/ImageJ-macosx' ) elif sys . platform . startswith ( 'linux' ) : subprocess . run ( [ 'wget' , 'https://downloads.imagej.net/fiji/latest/fiji-linux64.zip' ] , cwd = home ) subprocess . run ( [ 'unzip' , 'fiji-linux64.zip' ] , cwd = home ) os . environ [ 'FIJI_BIN' ] = os . path . join ( home , 'Fiji.app/ImageJ-linux64' ) print ( "Downloaded Fiji" ) return _get_fiji ( )
short_docstring: Checks if Fiji is downloaded.
short_docstring_tokens: Checks if Fiji is downloaded .
comment: """Checks if Fiji is downloaded.
  
      Checks if an existing version of Fiji is downloaded and whether
      it is identified as the system variable "FIJI_BIN." Only compatible
      with Linux and Mac systems.
  
      """$SEP$# paths = list(compress(paths, exists))$SEP$# Currently only works on Mac and Linux$SEP$# print('System is not Linux or Mac')$SEP$# Has the user specified Fiji for us already as an environment variable?$SEP$# Want to use it if it is already installed$SEP$# Is Fiji installed somewhere, but not defined in path?$SEP$# Checks in two locations, doesn't search entire system$SEP$# Download it if not