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try: |
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import pandas as pd |
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except ImportError: |
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print("Please install the pandas package with 'pip install pandas' and try again.") |
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exit(1) |
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import argparse |
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_VERSION = "1.01" |
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class ExplicitDefaultsHelpFormatter(argparse.ArgumentDefaultsHelpFormatter): |
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def _get_help_string(self, action): |
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if action.default is None or action.default is False: |
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return action.help |
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return super()._get_help_string(action) |
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def processColumn(col, dict): |
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for line in col: |
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if len(line.split()) == 1: |
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key=line.strip() |
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if key in dict: |
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dict[key]+=1 |
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else: |
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dict[key]=1 |
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def processTSVfiles(files, dict): |
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for tsv in files: |
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try: |
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inDF = pd.read_csv(tsv, sep='\t', dtype=str, low_memory=False, na_filter=False, quoting=3) |
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except IOError: |
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print("Error in opening "+tsv+" file") |
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try: |
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col = inDF[parsed_args.column] |
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except KeyError: |
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print("Error in reading column <"+parsed_args.column+"> in TSV file") |
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exit(1) |
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processColumn(col, dict) |
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return findSuspiciousWord(dict) |
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def findSuspiciousWord(dict): |
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argmax = "" |
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max = -1 |
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for w,c in list(dict.items()): |
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if c > max: |
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max = c |
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argmax = w |
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return argmax |
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def main(args): |
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""" |
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This script flags (by setting True the corresponding entry of |
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the hall_frequent_single_word) those sentences which consists |
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of only one single suspicious word. This word can be either passed |
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as a parameter (suspiciousWord option) or found inside the TSV |
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input files. In the latter case, it is set as the most frequent |
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word in the text included in files to be inspected. |
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The TSV files to inspect can be passed through the |
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tsv-SuspiciousWordFiles option. If no explicit suspiciousWord nor |
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tsv-SuspiciousWordFiles is passed, the tsv-InFile is inspected. |
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""" |
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dict = {} |
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if (parsed_args.version): |
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print(f"Version {_VERSION} of anomalous string detector") |
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exit(1) |
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if not (tsv_files_specified): |
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print("--tsv-InFile and --tsv-OutFile are both required") |
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parser.print_usage() |
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exit(1) |
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if (contrastive_options): |
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print("Either specify SuspiciousWord or SuspiciousWordFiles, both cannot be passed") |
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parser.print_usage() |
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exit(1) |
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""" |
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Get the suspiciousWord: |
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""" |
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if getattr(parsed_args, 'suspiciousWord') is not None: |
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suspiciousWord = parsed_args.suspiciousWord.strip() |
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elif getattr(parsed_args, 'tsv_SuspiciousWordFiles') is not None: |
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suspiciousWord = processTSVfiles(parsed_args.tsv_SuspiciousWordFiles, dict) |
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else: |
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suspiciousWord = processTSVfiles([parsed_args.tsv_InFile], dict) |
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try: |
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inDF = pd.read_csv(args.tsv_InFile, sep='\t', dtype=str, low_memory=False, na_filter=False, quoting=3) |
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except IOError: |
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print("Error in opening "+tsv+" file") |
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try: |
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txt = inDF[parsed_args.column] |
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except KeyError: |
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print("Error in reading column <"+parsed_args.column+"> in TSV file") |
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exit(1) |
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flag = [] |
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for line in txt: |
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if suspiciousWord == line.strip(): |
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if args.quiet: |
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flag.append("True") |
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else: |
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flag.append("True ("+suspiciousWord+")") |
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else: |
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flag.append("False") |
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inDF['hall_frequent_single_word'] = flag |
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inDF.to_csv(args.tsv_OutFile, sep="\t", index=False, quoting=3) |
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if __name__ == '__main__': |
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parser = argparse.ArgumentParser(formatter_class=ExplicitDefaultsHelpFormatter) |
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parser.add_argument( |
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'--tsv-InFile', '-i', type=str, |
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help="The input TSV file [Mandatory]") |
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parser.add_argument( |
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'--tsv-OutFile', '-o', type=str, |
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help="The output TSV file [Mandatory. If equal to input TSV file, the new column ('suspicious single word') is added to the original file]") |
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parser.add_argument( |
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'--tsv-SuspiciousWordFiles', '-s', type=str, nargs='+', |
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help="The TSV file(s) used to look for the suspicious word [Optional. If not present, the input TSV file is used instead]") |
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parser.add_argument( |
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'--column', '-c', default='source', |
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help="Column name of the text to process [Optional]") |
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parser.add_argument( |
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'--suspiciousWord', '-w', type=str, |
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help="suspicious word [if not specified, found in other TSV files passed as parameters]") |
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parser.add_argument( |
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'--quiet', '-q', default=False, action='store_true', |
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help='Print only True/False, no explanation for True\'s') |
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parser.add_argument( |
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'--version', '-v', action='store_true', default=False, |
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help="Print version of the script and exit") |
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parsed_args = parser.parse_args() |
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tsv_files_specified = \ |
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getattr(parsed_args, 'tsv_InFile') is not None \ |
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and len(parsed_args.tsv_InFile) > 0 \ |
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and getattr(parsed_args, 'tsv_OutFile') is not None \ |
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and len(parsed_args.tsv_OutFile) > 0 |
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contrastive_options = \ |
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getattr(parsed_args, 'tsv_SuspiciousWordFiles') is not None \ |
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and getattr(parsed_args, 'suspiciousWord') is not None |
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main(parsed_args) |
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