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Updated README

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  2. data_processing.png +3 -0
  3. test_001.png +3 -0
README.md CHANGED
@@ -33,3 +33,54 @@ dataset_info:
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  download_size: 7915673821
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  dataset_size: 7855387543.625
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  ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  download_size: 7915673821
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  dataset_size: 7855387543.625
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  ---
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+ # Dataset Card for Histopathology Dataset
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+ ## Dataset Summary
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+ This dataset contains 224x224, 512x512 and 1024x1024 patches of a group of histopathology images taken from the [CAMELYON16](http://gigadb.org/dataset/100439) dataset and embedding vectors extracted from these patches using the [Google Path Foundation](https://huggingface.co/google/path-foundation) model.
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+ ![Data Processing](data_processing.png)
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+ ## Thumbnail of Main Slide
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+
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+ ![Main Slide Thumbnail](test_001.png)
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+
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+ ## Supported Tasks
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+ Machine learning applications that can be performed using this dataset:
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+ * Classification
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+ * Segmentation
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+ * Image generation
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+
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+ ## Languages
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+ * English
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+
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+ ## Dataset Structure
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+ ### Data Fields
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+ - `image`: Image of the patch.
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+ - `slide_name`: Main slide name of the patch.
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+ - `x`: X coordinate of the patch.
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+ - `y`: Y coordinate of the patch.
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+ - `level`: Level of the main slide.
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+ - `patch_size`: Size of the patch.
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+ - `resize`: Image size used to obtain embedding vector with Path foundation model.
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+ - `embedding_vector`: Embedding vector of the patch extracted using Path foundation model.
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+
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+ ## Dataset Creation
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+ ### Source Data
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+ - **Original Sources
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+ - [CAMELYON16](http://gigadb.org/dataset/100439): List of images taken from CAMELYON16 dataset:
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+ * `test_001.tif`
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+ * `test_002.tif`
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+ * `test_003.tif`
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+ * `test_004.tif`
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+ * `test_005.tif`
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+ * `test_006.tif`
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+ * `test_007.tif`
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+ * `test_008.tif`
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+ * `test_009.tif`
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+ - [Google Path Foundation](https://huggingface.co/google/path-foundation): Embedding vectors extracted from the patches using the Path Foundation model.
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+
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+ ## Considerations for Using the Data
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+ ### Social Impact and Bias
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+ Attention should be paid to the Path Foundation model licenses provided by Google.
data_processing.png ADDED

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test_001.png ADDED

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