Soil pH affects the availability of some plant nutrients:
As discussed above, aluminium toxicity has direct effects on plant growth; however, by limiting root growth, it also reduces the availability of plant nutrients. Because roots are damaged, nutrient uptake is reduced, and deficiencies of the macronutrients (nitrogen, phosphorus, potassium, calcium and magnesium) are frequently encountered in very strongly acidic to ultra-acidic soils (pH<5.0). When aluminum levels increase in the soil, it decreases the pH levels. This does not allow for trees to take up water, meaning they cannot photosynthesize, leading them to die. The trees can also develop yellowish colour on their leaves and veins.
Molybdenum availability is increased at higher pH; this is because the molybdate ion is more strongly sorbed by clay particles at lower pH.
Zinc, iron, copper and manganese show decreased availability at higher pH (increased sorption at higher pH).
The effect of pH on phosphorus availability varies considerably, depending on soil conditions and the crop in question. The prevailing view in the 1940s and 1950s was that P availability was maximized near neutrality (soil pH 6.5–7.5), and decreased at higher and lower pH. Interactions of phosphorus with pH in the moderately to slightly acidic range (pH 5.5–6.5) are, however, far more complex than is suggested by this view. Laboratory tests, glasshouse trials and field trials have indicated that increases in pH within this range may increase, decrease, or have no effect on P availability to plants.