* Lee, Y. T. "Crossed Molecular Beam Studies and Dynamics of Decomposition of Chemically Activated Radicals", University of Chicago, United States Department of Energy (through predecessor agency the Atomic Energy Commission), (September 1973).
* Lee, Y. T. & S. J. Sibener. "Internal Energy Dependence of Molecular Condensation Coefficients Determined from Molecular Beam Surface Scattering Experiments", Lawrence Berkeley Laboratory, University of California, Berkeley, United States Department of Energy, (May 1978).
* Lee, Y. T., Sibener, S. J. & R. J. Buss. "Development of a Supersonic Atomic Oxygen Nozzle Beam Source for Crossed Beam Scattering Experiments", Lawrence Berkeley Laboratory, University of California, Berkeley, United States Department of Energy, (May 1978).
* Lee, Y. T., Baseman, R. J., Guozhong, H. & R. J. Buss. "Reaction Mechanism of Oxygen Atoms with Unsaturated Hydrocarbons by the Crossed-Molecular-Beams Method", Lawrence Berkeley Laboratory, University of California, Berkeley, United States Department of Energy-Office of Basic Energy Science, (April 1982).
* Lee, Y. T. "Molecular-beam Studies of Primary Photochemical Processes", Lawrence Berkeley Laboratory, University of California, Berkeley, United States Department of Energy, (December 1982).
* Lee, Y. T., Continetti, R. E. & B. A. Balko. "Molecular Beam Studies of Hot Atom Chemical Reactions: Reactive Scattering of Energetic Deuterium Atoms", Lawrence Berkeley Laboratory, United States Department of Energy, (February 1989).
* Lee, Y.T., "Energy, Environment, and the Responsibility of Scientists", (2007).