In chromatography, internal standards are used to determine the concentration of other analytes by calculating response factor. The selected internal standard should have a similar retention time and derivatization. It must be stable and not interfere with the sample components. This mitigates the uncertainty that can occur in preparatory steps such as sample injection.
In gas chromatography-mass spectrometry (GC-MS), deuterated compounds with similar structures to the analyte commonly act as effective internal standards. However, there are non-deuterated internal standards such as norleucine, which is popular in the analysis of amino acids because it can be separated from accompanying peaks.
Selecting an internal standard for liquid chromatography-mass spectrometry (LC-MS) depends on the employed ionization method. The internal standard needs a comparable ionization response and fragmentation pattern to the analyte. LC-MS internal standards are often isotopically analogous to the structure of the analyte, using isotopes such as deuterium (H), C, N and O.