scout/load/all.py
def load_scout(adapter, config, ped=None, update=False):
    """Load a new case from a Scout config.

        Args:
            adapter(MongoAdapter)
            config(dict): loading info
            ped(Iterable(str)): Pedigree ingformation
            update(bool): If existing case should be updated

    """
    log.info("Check that the panels exists")
    if not check_panels(adapter, config.get('gene_panels', []),
                        config.get('default_gene_panels')):
        raise ConfigError("Some panel(s) does not exist in the database")
    case_obj = adapter.load_case(config, update=update)
    return case_obj
def load_scout(adapter, config, ped=None, update=False):
    log.info("Check that the panels exists")
    if not check_panels(adapter, config.get('gene_panels', []),
                        config.get('default_gene_panels')):
        raise ConfigError("Some panel(s) does not exist in the database")
    case_obj = adapter.load_case(config, update=update)
    return case_obj
def load_scout ( adapter , config , ped = None , update = False ) : log . info ( "Check that the panels exists" ) if not check_panels ( adapter , config . get ( 'gene_panels' , [ ] ) , config . get ( 'default_gene_panels' ) ) : raise ConfigError ( "Some panel(s) does not exist in the database" ) case_obj = adapter . load_case ( config , update = update ) return case_obj
Load a new case from a Scout config.

        Args:
            adapter(MongoAdapter)
            config(dict): loading info
            ped(Iterable(str)): Pedigree ingformation
            update(bool): If existing case should be updated
Load a new case from a Scout config .