jacquard/utils/vcf.py
def text(self):
        "Returns tab-delimited, newline terminated string of VcfRecord."
        stringifier = [self.chrom, self.pos, self.vcf_id, self.ref, self.alt,
                       self.qual, self.filter, self.info,
                       self._format_field()]

        for sample in self.sample_tag_values:
            stringifier.append(self._sample_field(sample))

        return "\t".join(stringifier) + "\n"
def text(self):
        "Returns tab-delimited, newline terminated string of VcfRecord."
        stringifier = [self.chrom, self.pos, self.vcf_id, self.ref, self.alt,
                       self.qual, self.filter, self.info,
                       self._format_field()]

        for sample in self.sample_tag_values:
            stringifier.append(self._sample_field(sample))

        return "\t".join(stringifier) + "\n"
def text ( self ) : stringifier = [ self . chrom , self . pos , self . vcf_id , self . ref , self . alt , self . qual , self . filter , self . info , self . _format_field ( ) ] for sample in self . sample_tag_values : stringifier . append ( self . _sample_field ( sample ) ) return "\t" . join ( stringifier ) + "\n"
Returns tab-delimited, newline terminated string of VcfRecord.
Returns tab - delimited newline terminated string of VcfRecord .