scout/server/blueprints/variants/controllers.py
def spidex_human(variant_obj):
    """Translate SPIDEX annotation to human readable string."""
    if variant_obj.get('spidex') is None:
        return 'not_reported'
    elif abs(variant_obj['spidex']) < SPIDEX_HUMAN['low']['pos'][1]:
        return 'low'
    elif abs(variant_obj['spidex']) < SPIDEX_HUMAN['medium']['pos'][1]:
        return 'medium'
    else:
        return 'high'
def spidex_human(variant_obj):
    if variant_obj.get('spidex') is None:
        return 'not_reported'
    elif abs(variant_obj['spidex']) < SPIDEX_HUMAN['low']['pos'][1]:
        return 'low'
    elif abs(variant_obj['spidex']) < SPIDEX_HUMAN['medium']['pos'][1]:
        return 'medium'
    else:
        return 'high'
def spidex_human ( variant_obj ) : if variant_obj . get ( 'spidex' ) is None : return 'not_reported' elif abs ( variant_obj [ 'spidex' ] ) < SPIDEX_HUMAN [ 'low' ] [ 'pos' ] [ 1 ] : return 'low' elif abs ( variant_obj [ 'spidex' ] ) < SPIDEX_HUMAN [ 'medium' ] [ 'pos' ] [ 1 ] : return 'medium' else : return 'high'
Translate SPIDEX annotation to human readable string.
Translate SPIDEX annotation to human readable string .