scout/server/blueprints/variants/controllers.py
def beacon_link(variant_obj, build=None):
    """Compose link to Beacon Network."""
    build = build or 37
    url_template = ("https://beacon-network.org/#/search?pos={this[position]}&"
                    "chrom={this[chromosome]}&allele={this[alternative]}&"
                    "ref={this[reference]}&rs=GRCh37")
    # beacon does not support build 38 at the moment
    # if build == '38':
    #     url_template = ("https://beacon-network.org/#/search?pos={this[position]}&"
    #                     "chrom={this[chromosome]}&allele={this[alternative]}&"
    #                     "ref={this[reference]}&rs=GRCh38")

    return url_template.format(this=variant_obj)
def beacon_link(variant_obj, build=None):
    build = build or 37
    url_template = ("https://beacon-network.org/#/search?pos={this[position]}&"
                    "chrom={this[chromosome]}&allele={this[alternative]}&"
                    "ref={this[reference]}&rs=GRCh37")
    # beacon does not support build 38 at the moment
    # if build == '38':
    #     url_template = ("https://beacon-network.org/#/search?pos={this[position]}&"
    #                     "chrom={this[chromosome]}&allele={this[alternative]}&"
    #                     "ref={this[reference]}&rs=GRCh38")

    return url_template.format(this=variant_obj)
def beacon_link ( variant_obj , build = None ) : build = build or 37 url_template = ( "https://beacon-network.org/#/search?pos={this[position]}&" "chrom={this[chromosome]}&allele={this[alternative]}&" "ref={this[reference]}&rs=GRCh37" ) # beacon does not support build 38 at the moment # if build == '38': #     url_template = ("https://beacon-network.org/#/search?pos={this[position]}&" #                     "chrom={this[chromosome]}&allele={this[alternative]}&" #                     "ref={this[reference]}&rs=GRCh38") return url_template . format ( this = variant_obj )
Compose link to Beacon Network.
Compose link to Beacon Network .