scout/server/blueprints/variants/controllers.py
def find_bai_file(bam_file):
    """Find out BAI file by extension given the BAM file."""
    bai_file = bam_file.replace('.bam', '.bai')
    if not os.path.exists(bai_file):
        # try the other convention
        bai_file = "{}.bai".format(bam_file)
    return bai_file
def find_bai_file(bam_file):
    bai_file = bam_file.replace('.bam', '.bai')
    if not os.path.exists(bai_file):
        # try the other convention
        bai_file = "{}.bai".format(bam_file)
    return bai_file
def find_bai_file ( bam_file ) : bai_file = bam_file . replace ( '.bam' , '.bai' ) if not os . path . exists ( bai_file ) : # try the other convention bai_file = "{}.bai" . format ( bam_file ) return bai_file
Find out BAI file by extension given the BAM file.
Find out BAI file by extension given the BAM file .