<s> import sys , os <EOL> from pyGeno . tools . parsers . CSVTools import CSVFile <EOL> __all__ = [ "<STR_LIT>" , "<STR_LIT>" ] <EOL> class Recorder_ABC ( object ) : <EOL> """<STR_LIT>""" <EOL> def commit ( self , store , model ) : <EOL> """<STR_LIT>""" <EOL> raise NotImplemented ( "<STR_LIT>" ) <EOL> def __len__ ( self ) : <EOL> """<STR_LIT>""" <EOL> raise NotImplemented ( "<STR_LIT>" ) <EOL> class GGPlot2 ( Recorder_ABC ) : <EOL> """<STR_LIT>""" <EOL> def __init__ ( self , filename , saveBestsFor = [ "<STR_LIT:test>" , "<STR_LIT>" ] , printRate = <NUM_LIT:1> , writeRate = <NUM_LIT:1> ) : <EOL> self . filename = filename . replace ( "<STR_LIT>" , "<STR_LIT>" ) + "<STR_LIT>" <EOL> self . bestScores = { } <EOL> self . currentScores = { } <EOL> self . csvLegend = None <EOL> self . csvFile = None <EOL> self . length = <NUM_LIT:0> <EOL> self . printRate = printRate <EOL> self . writeRate = writeRate <EOL> self . saveBestsFor = saveBestsFor <EOL> def getBestModelFilename ( self , outputName , theSet ) : <EOL> return "<STR_LIT>" % ( outputName , theSet , self . filename ) <EOL> def commit ( self , store , model ) : <EOL> """<STR_LIT>""" <EOL> def _fillLine ( csvFile , score , bestScore , setName , setLen , outputName , ** csvValues ) : <EOL> line = csvFile . newLine ( ) <EOL> for k , v in csvValues . iteritems ( ) : <EOL> line [ k ] = v <EOL> line [ "<STR_LIT>" ] = score <EOL> line [ "<STR_LIT>" ] = bestScore [ <NUM_LIT:0> ] <EOL> line [ "<STR_LIT>" ] = bestScore [ <NUM_LIT:1> ] <EOL> line [ "<STR_LIT>" ] = "<STR_LIT>" % ( setName , setLen ) <EOL> line [ "<STR_LIT>" ] = outputName <EOL> line . commit ( ) <EOL> self . length += <NUM_LIT:1> <EOL> if self . csvLegend is None : <EOL> self . csvLegend = store [ "<STR_LIT>" ] . keys ( ) <EOL> self . csvLegend . extend ( store [ "<STR_LIT>" ] . keys ( ) ) <EOL> self . csvLegend . extend ( [ "<STR_LIT>" , "<STR_LIT>" , "<STR_LIT>" , "<STR_LIT>" , "<STR_LIT>" ] ) <EOL> self . csvFile = CSVFile ( legend = self . csvLegend ) <EOL> self . csvFile . streamToFile ( self . filename , writeRate = self . writeRate ) <EOL> for theSet , scores in store [ "<STR_LIT>" ] . iteritems ( ) : <EOL> self . currentScores [ theSet ] = { } <EOL> if theSet not in self . bestScores : <EOL> self . bestScores [ theSet ] = { } <EOL> for outputName , score in scores . iteritems ( ) : <EOL> self . currentScores [ theSet ] [ outputName ] = score <EOL> if outputName not in self . bestScores [ theSet ] or score < self . bestScores [ theSet ] [ outputName ] [ <NUM_LIT:0> ] : <EOL> self . bestScores [ theSet ] [ outputName ] = ( score , self . length ) <EOL> if theSet in self . saveBestsFor : <EOL> model . save ( self . getBestModelFilename ( outputName , theSet ) ) <EOL> muchData = store [ "<STR_LIT>" ] <EOL> muchData . update ( store [ "<STR_LIT>" ] ) <EOL> _fillLine ( <EOL> self . csvFile , <EOL> self . currentScores [ theSet ] [ outputName ] , <EOL> self . bestScores [ theSet ] [ outputName ] , <EOL> theSet , <EOL> store [ "<STR_LIT>" ] [ theSet ] , <EOL> outputName , <EOL> ** muchData <EOL> ) <EOL> if self . printRate > <NUM_LIT:0> and ( self . length % self . printRate ) == <NUM_LIT:0> : <EOL> self . printCurrentState ( ) <EOL> def printCurrentState ( self ) : <EOL> """<STR_LIT>""" <EOL> if self . length > <NUM_LIT:0> : <EOL> print "<STR_LIT>" % ( self . length , os . getpid ( ) ) <EOL> for setName , scores in self . bestScores . iteritems ( ) : <EOL> print "<STR_LIT>" % setName <EOL> for outputName in scores : <EOL> if self . currentScores [ setName ] [ outputName ] == self . bestScores [ setName ] [ outputName ] [ <NUM_LIT:0> ] : <EOL> highlight = "<STR_LIT>" <EOL> else : <EOL> score , epoch = self . bestScores [ setName ] [ outputName ] <EOL> highlight = "<STR_LIT>" % ( score , epoch ) <EOL> print "<STR_LIT>" % ( outputName , self . currentScores [ setName ] [ outputName ] , highlight ) <EOL> else : <EOL> print "<STR_LIT>" <EOL> sys . stdout . flush ( ) <EOL> def getBestModel ( self , outputName , theSet ) : <EOL> """<STR_LIT>""" <EOL> import Mariana . network as MNET <EOL> fn = self . getBestModelFilename ( outputName , theSet ) <EOL> return MNET . loadModel ( fn ) <EOL> def __len__ ( self ) : <EOL> """<STR_LIT>""" <EOL> return self . length </s>
