<s> import os <EOL> from chanjo . annotate . sambamba import run_sambamba <EOL> def test_run_sambamba ( ) : <EOL> bam = '<STR_LIT>' <EOL> bed = '<STR_LIT>' <EOL> out = '<STR_LIT>' <EOL> thresholds = ( <NUM_LIT:10> , <NUM_LIT:20> ) <EOL> run_sambamba ( bam , bed , outfile = out , cov_treshold = thresholds ) <EOL> assert os . path . exists ( out ) </s>
